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Tan0007547 (gene) of Snake gourd v1 genome

Gene IDTan0007547
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:5299244..5299653
RNA-Seq ExpressionTan0007547
SyntenyTan0007547
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037478.1 hypothetical protein E6C27_scaffold277G00690 [Cucumis melo var. makuwa]8.0e-1266.67Show/hide
Query:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIKFLGLVVSFFVLKDM
        M LQKC+GM LIWVACLL++  TEAEAQS  YGS  + EA  SH ML+KFLGL+VSF VLK++
Subjt:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIKFLGLVVSFFVLKDM
KAE8648896.1 hypothetical protein Csa_008661 [Cucumis sativus]1.5e-0554.55Show/hide
Query:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIK--FLGLVVSFFVLKDMD
        M L+KC+GM LIWVACLL++M TEAEAQS  YGS  + EA  SH ML    F+  VV   V +  D
Subjt:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIK--FLGLVVSFFVLKDMD
TrEMBL top hitse value%identityAlignment
A0A0A0KS19 Uncharacterized protein3.2e-0665.31Show/hide
Query:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIK
        M L+KC+GM LIWVACLL++M TEAEAQS  YGS  + EA  SH ML K
Subjt:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIK
A0A5A7T3W0 Uncharacterized protein3.9e-1266.67Show/hide
Query:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIKFLGLVVSFFVLKDM
        M LQKC+GM LIWVACLL++  TEAEAQS  YGS  + EA  SH ML+KFLGL+VSF VLK++
Subjt:  MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIKFLGLVVSFFVLKDM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTCAGAAGTGTATTGGAATGGGTCTAATTTGGGTTGCTTGCTTGCTTCTTGCCATGGTTACAGAAGCAGAAGCTCAGAGCTATGACTATGGCTCCAAGAGTTC
AGCTGAGGCCACATCTTCCCATGGAATGCTCATCAAATTTCTGGGTCTTGTTGTTTCCTTTTTTGTTCTCAAAGATATGGATTTGTGTTCTGCTTTGGAGTTTATATGTC
TTCATGAGAGGAGAATTGGTGAAATTTGTATTGGGACTGTTGAAGATGAAGTTACTGATTGTGAAATTGAAGTTATTTCTGTATGTGTCTACTGTGTTCTTAGCATTTGG
CTCAGTAGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTTCAGAAGTGTATTGGAATGGGTCTAATTTGGGTTGCTTGCTTGCTTCTTGCCATGGTTACAGAAGCAGAAGCTCAGAGCTATGACTATGGCTCCAAGAGTTC
AGCTGAGGCCACATCTTCCCATGGAATGCTCATCAAATTTCTGGGTCTTGTTGTTTCCTTTTTTGTTCTCAAAGATATGGATTTGTGTTCTGCTTTGGAGTTTATATGTC
TTCATGAGAGGAGAATTGGTGAAATTTGTATTGGGACTGTTGAAGATGAAGTTACTGATTGTGAAATTGAAGTTATTTCTGTATGTGTCTACTGTGTTCTTAGCATTTGG
CTCAGTAGAGATTGA
Protein sequenceShow/hide protein sequence
MGLQKCIGMGLIWVACLLLAMVTEAEAQSYDYGSKSSAEATSSHGMLIKFLGLVVSFFVLKDMDLCSALEFICLHERRIGEICIGTVEDEVTDCEIEVISVCVYCVLSIW
LSRD