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Tan0007588 (gene) of Snake gourd v1 genome

Gene IDTan0007588
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG02:57431082..57431528
RNA-Seq ExpressionTan0007588
SyntenyTan0007588
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.2e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
A0A5A7TU93 Gag/pol protein3.2e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
A0A5A7TWB9 Gag/pol protein3.2e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
A0A5A7V4M1 Gag/pol protein3.2e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
A0A5D3CPJ6 Gag/pol protein3.2e-5177.55Show/hide
Query:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ
        A+ YILAS+SEVLAKK+E M++AREIM SLQEMFGQ S QI+H++LKYIYN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE  QVSFILESLP SFLQ
Subjt:  AKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQ

Query:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
        F SNAVMNKI Y LTTLLNELQTF+SLMK KGQ  GEANV   +R+F
Subjt:  FCSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGTGTATATTTTGGCTAGTGTTTCTGAAGTGCTGGCCAAAAAATACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGTTGCAGGAAATGTTTGGACA
ACCATCTGGACAGATTCAGCATGAATCCCTAAAATACATTTATAACTCCCGTATGAAGGAGGGGTCGTCAGTGAGAGAACATGTTCTCGATCTGATGGTCCACTTCAACG
TGGCTGAGATGAACGGAGCGGTCATTGACGAGCAAATTCAGGTATCGTTCATCCTAGAATCTCTTCCGATGAGTTTCCTGCAATTCTGCAGCAATGCGGTGATGAACAAG
ATAGAGTATAACCTGACAACTCTCCTTAATGAACTACAAACTTTCCAGTCTCTTATGAAGAATAAGGGACAAGCTGATGGAGAGGCAAATGTGTTTGCCCATTCTAGAAG
GTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGGTGTATATTTTGGCTAGTGTTTCTGAAGTGCTGGCCAAAAAATACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGTTGCAGGAAATGTTTGGACA
ACCATCTGGACAGATTCAGCATGAATCCCTAAAATACATTTATAACTCCCGTATGAAGGAGGGGTCGTCAGTGAGAGAACATGTTCTCGATCTGATGGTCCACTTCAACG
TGGCTGAGATGAACGGAGCGGTCATTGACGAGCAAATTCAGGTATCGTTCATCCTAGAATCTCTTCCGATGAGTTTCCTGCAATTCTGCAGCAATGCGGTGATGAACAAG
ATAGAGTATAACCTGACAACTCTCCTTAATGAACTACAAACTTTCCAGTCTCTTATGAAGAATAAGGGACAAGCTGATGGAGAGGCAAATGTGTTTGCCCATTCTAGAAG
GTTTTAG
Protein sequenceShow/hide protein sequence
MAKVYILASVSEVLAKKYEGMVSAREIMSSLQEMFGQPSGQIQHESLKYIYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQIQVSFILESLPMSFLQFCSNAVMNK
IEYNLTTLLNELQTFQSLMKNKGQADGEANVFAHSRRF