; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007614 (gene) of Snake gourd v1 genome

Gene IDTan0007614
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG10:31731313..31733847
RNA-Seq ExpressionTan0007614
SyntenyTan0007614
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-30966.43Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKGYRAKEPL+LIHSD+CG MN+KAR G EYFISFIDDYSR+G++YLM HKSEALEKFKE+ TEVEN L K IK LRSDRGGEYMDL+FQ+YM
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYA LPSSFWGY VETAV+ILNNVPSKSVSETPFELW+GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------
                  GYPKETRGGLFFDP+E++VFVSTN  FLEEDH+R+HKP+SK+VLSE            G  ++V + T+                     
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------

Query:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG
                                                                            CKWIYKRKR   GKVQTFKARLVAKGYTQ EG
Subjt:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG

Query:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD
        VDYEETFS VAM+KSIRILL+IA +YDYE+W+MDVKT  LNGNLEE+++M QP+GFI  GQEQ                                  N D
Subjt:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD

Query:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI
        EPCVYKKI    VAFL LYVDDILLIGNDVGYLTD+K WLA QFQMKDL +AQ+VLGIQI+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+
Subjt:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI

Query:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS
        HLSKEQ PKTPQ VEDMRRIPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL+HWT VK +LKYLRRTR+YMLVYGAKDLILTGYTDSDFQTDKDS
Subjt:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS

Query:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI
        +KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLRKF+ +L+VVPNM LPITLYCDNSGAVANS+EPRSHK+GKHIERKYHLIREI
Subjt:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI

Query:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ
        V RG+VIVTKI SEHN+ADPFTK LTAKVFE HLE LGL+
Subjt:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ

KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-30665.21Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKG+RAKEPL+L+HSD+CG MN+KAR G EYFI+F DDYSR+G++YLM HKSEALEKFKE+  EVEN L KTIKT RSDRGGEYMDLKFQNY+
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        +E GI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYAHLP+SFWGY V+TAVYILN VPSKSVSETP +LW GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------
                  GYPK TRGG F+DPK++KVFVSTN  FLEEDHIR+HKP+SK+VL+EL                                           
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------

Query:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT
                            DG I                                            K   CKWIYKRKRG DGKVQTFKARLVAKGYT
Subjt:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT

Query:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------
        QVEGVDYEETFS VAM+KSIRILL+IAAY+DYE+W+MDVKT  LNGNLEE +YM QP+GFI PGQEQ    +N                           
Subjt:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------

Query:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF
           DEPCVYK+IIN SVAFL LYVDDILLIGND+G LTDIK WLATQFQMKDL +AQFVLGIQI R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPF
Subjt:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF

Query:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT
        RHG+ LSKEQCPKTPQ VE+MR IPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL HWT VKTILKYLRRTR+Y LVYG+KDLILTGYTDSDFQT
Subjt:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL
        D+DS+KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLR F+++L+VVPNM+ PITLYCDNSGAVANSREPRSHK+GKHIERKYHL
Subjt:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL

Query:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN
        IREIVHRG+VIVT+I S HNVADPFTK LTAKVFE HLE LGL+  P+
Subjt:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-30665.21Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKG+RAKEPL+L+HSD+CG MN+KAR G EYFI+F DDYSR+G++YLM HKSEALEKFKE+  EVEN L KTIKT RSDRGGEYMDLKFQNY+
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        +E GI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYAHLP+SFWGY V+TAVYILN VPSKSVSETP +LW GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------
                  GYPK TRGG F+DPK++KVFVSTN  FLEEDHIR+HKP+SK+VL+EL                                           
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------

Query:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT
                            DG I                                            K   CKWIYKRKRG DGKVQTFKARLVAKGYT
Subjt:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT

Query:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------
        QVEGVDYEETFS VAM+KSIRILL+IAAY+DYE+W+MDVKT  LNGNLEE +YM QP+GFI PGQEQ    +N                           
Subjt:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------

Query:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF
           DEPCVYK+IIN SVAFL LYVDDILLIGND+G LTDIK WLATQFQMKDL +AQFVLGIQI R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPF
Subjt:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF

Query:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT
        RHG+ LSKEQCPKTPQ VE+MR IPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL HWT VKTILKYLRRTR+Y LVYG+KDLILTGYTDSDFQT
Subjt:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL
        D+DS+KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLR F+++L+VVPNM+ PITLYCDNSGAVANSREPRSHK+GKHIERKYHL
Subjt:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL

Query:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN
        IREIVHRG+VIVT+I S HNVADPFTK LTAKVFE HLE LGL+  P+
Subjt:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-30665.21Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKG+RAKEPL+L+HSD+CG MN+KAR G EYFI+F DDYSR+G++YLM HKSEALEKFKE+  EVEN L KTIKT RSDRGGEYMDLKFQNY+
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        +E GI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYAHLP+SFWGY V+TAVYILN VPSKSVSETP +LW GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------
                  GYPK TRGG F+DPK++KVFVSTN  FLEEDHIR+HKP+SK+VL+EL                                           
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------

Query:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT
                            DG I                                            K   CKWIYKRKRG DGKVQTFKARLVAKGYT
Subjt:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT

Query:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------
        QVEGVDYEETFS VAM+KSIRILL+IAAY+DYE+W+MDVKT  LNGNLEE +YM QP+GFI PGQEQ    +N                           
Subjt:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------

Query:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF
           DEPCVYK+IIN SVAFL LYVDDILLIGND+G LTDIK WLATQFQMKDL +AQFVLGIQI R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPF
Subjt:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF

Query:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT
        RHG+ LSKEQCPKTPQ VE+MR IPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL HWT VKTILKYLRRTR+Y LVYG+KDLILTGYTDSDFQT
Subjt:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL
        D+DS+KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLR F+++L+VVPNM+ PITLYCDNSGAVANSREPRSHK+GKHIERKYHL
Subjt:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL

Query:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN
        IREIVHRG+VIVT+I S HNVADPFTK LTAKVFE HLE LGL+  P+
Subjt:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-30966.43Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKGYRAKEPL+LIHSD+CG MN+KAR G EYFISFIDDYSR+G++YLM HKSEALEKFKE+ TEVEN L K IK LRSDRGGEYMDL+FQ+YM
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYA LPSSFWGY VETAV+ILNNVPSKSVSETPFELW+GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------
                  GYPKETRGGLFFDP+E++VFVSTN  FLEEDH+R+HKP+SK+VLSE            G  ++V + T+                     
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------

Query:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG
                                                                            CKWIYKRKR   GKVQTFKARLVAKGYTQ EG
Subjt:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG

Query:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD
        VDYEETFS VAM+KSIRILL+IA +YDYE+W+MDVKT  LNGNLEE+++M QP+GFI  GQEQ                                  N D
Subjt:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD

Query:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI
        EPCVYKKI    VAFL LYVDDILLIGNDVGYLTD+K WLA QFQMKDL +AQ+VLGIQI+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+
Subjt:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI

Query:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS
        HLSKEQ PKTPQ VEDMRRIPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL+HWT VK +LKYLRRTR+YMLVYGAKDLILTGYTDSDFQTDKDS
Subjt:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS

Query:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI
        +KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLRKF+ +L+VVPNM LPITLYCDNSGAVANS+EPRSHK+GKHIERKYHLIREI
Subjt:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI

Query:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ
        V RG+VIVTKI SEHN+ADPFTK LTAKVFE HLE LGL+
Subjt:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.0e-30665.21Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKG+RAKEPL+L+HSD+CG MN+KAR G EYFI+F DDYSR+G++YLM HKSEALEKFKE+  EVEN L KTIKT RSDRGGEYMDLKFQNY+
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        +E GI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYAHLP+SFWGY V+TAVYILN VPSKSVSETP +LW GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------
                  GYPK TRGG F+DPK++KVFVSTN  FLEEDHIR+HKP+SK+VL+EL                                           
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------

Query:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT
                            DG I                                            K   CKWIYKRKRG DGKVQTFKARLVAKGYT
Subjt:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT

Query:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------
        QVEGVDYEETFS VAM+KSIRILL+IAAY+DYE+W+MDVKT  LNGNLEE +YM QP+GFI PGQEQ    +N                           
Subjt:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------

Query:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF
           DEPCVYK+IIN SVAFL LYVDDILLIGND+G LTDIK WLATQFQMKDL +AQFVLGIQI R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPF
Subjt:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF

Query:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT
        RHG+ LSKEQCPKTPQ VE+MR IPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL HWT VKTILKYLRRTR+Y LVYG+KDLILTGYTDSDFQT
Subjt:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL
        D+DS+KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLR F+++L+VVPNM+ PITLYCDNSGAVANSREPRSHK+GKHIERKYHL
Subjt:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL

Query:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN
        IREIVHRG+VIVT+I S HNVADPFTK LTAKVFE HLE LGL+  P+
Subjt:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN

A0A5A7TZD0 Gag/pol protein1.0e-30966.43Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKGYRAKEPL+LIHSD+CG MN+KAR G EYFISFIDDYSR+G++YLM HKSEALEKFKE+ TEVEN L K IK LRSDRGGEYMDL+FQ+YM
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYA LPSSFWGY VETAV+ILNNVPSKSVSETPFELW+GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------
                  GYPKETRGGLFFDP+E++VFVSTN  FLEEDH+R+HKP+SK+VLSE            G  ++V + T+                     
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------

Query:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG
                                                                            CKWIYKRKR   GKVQTFKARLVAKGYTQ EG
Subjt:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG

Query:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD
        VDYEETFS VAM+KSIRILL+IA +YDYE+W+MDVKT  LNGNLEE+++M QP+GFI  GQEQ                                  N D
Subjt:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD

Query:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI
        EPCVYKKI    VAFL LYVDDILLIGNDVGYLTD+K WLA QFQMKDL +AQ+VLGIQI+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+
Subjt:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI

Query:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS
        HLSKEQ PKTPQ VEDMRRIPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL+HWT VK +LKYLRRTR+YMLVYGAKDLILTGYTDSDFQTDKDS
Subjt:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS

Query:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI
        +KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLRKF+ +L+VVPNM LPITLYCDNSGAVANS+EPRSHK+GKHIERKYHLIREI
Subjt:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI

Query:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ
        V RG+VIVTKI SEHN+ADPFTK LTAKVFE HLE LGL+
Subjt:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ

A0A5A7TZD7 Gag/pol protein1.0e-30665.21Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKG+RAKEPL+L+HSD+CG MN+KAR G EYFI+F DDYSR+G++YLM HKSEALEKFKE+  EVEN L KTIKT RSDRGGEYMDLKFQNY+
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        +E GI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYAHLP+SFWGY V+TAVYILN VPSKSVSETP +LW GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------
                  GYPK TRGG F+DPK++KVFVSTN  FLEEDHIR+HKP+SK+VL+EL                                           
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------

Query:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT
                            DG I                                            K   CKWIYKRKRG DGKVQTFKARLVAKGYT
Subjt:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT

Query:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------
        QVEGVDYEETFS VAM+KSIRILL+IAAY+DYE+W+MDVKT  LNGNLEE +YM QP+GFI PGQEQ    +N                           
Subjt:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------

Query:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF
           DEPCVYK+IIN SVAFL LYVDDILLIGND+G LTDIK WLATQFQMKDL +AQFVLGIQI R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPF
Subjt:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF

Query:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT
        RHG+ LSKEQCPKTPQ VE+MR IPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL HWT VKTILKYLRRTR+Y LVYG+KDLILTGYTDSDFQT
Subjt:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL
        D+DS+KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLR F+++L+VVPNM+ PITLYCDNSGAVANSREPRSHK+GKHIERKYHL
Subjt:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL

Query:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN
        IREIVHRG+VIVT+I S HNVADPFTK LTAKVFE HLE LGL+  P+
Subjt:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN

A0A5A7UYE8 Gag/pol protein1.0e-30966.43Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKGYRAKEPL+LIHSD+CG MN+KAR G EYFISFIDDYSR+G++YLM HKSEALEKFKE+ TEVEN L K IK LRSDRGGEYMDL+FQ+YM
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYA LPSSFWGY VETAV+ILNNVPSKSVSETPFELW+GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------
                  GYPKETRGGLFFDP+E++VFVSTN  FLEEDH+R+HKP+SK+VLSE            G  ++V + T+                     
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSELD----------GTIAKVTKNTS---------------------

Query:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG
                                                                            CKWIYKRKR   GKVQTFKARLVAKGYTQ EG
Subjt:  --------------------------------------------------------------------CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEG

Query:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD
        VDYEETFS VAM+KSIRILL+IA +YDYE+W+MDVKT  LNGNLEE+++M QP+GFI  GQEQ                                  N D
Subjt:  VDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ---------------------------------MNDD

Query:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI
        EPCVYKKI    VAFL LYVDDILLIGNDVGYLTD+K WLA QFQMKDL +AQ+VLGIQI+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+
Subjt:  EPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGI

Query:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS
        HLSKEQ PKTPQ VEDMRRIPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL+HWT VK +LKYLRRTR+YMLVYGAKDLILTGYTDSDFQTDKDS
Subjt:  HLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDS

Query:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI
        +KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLRKF+ +L+VVPNM LPITLYCDNSGAVANS+EPRSHK+GKHIERKYHLIREI
Subjt:  QKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREI

Query:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ
        V RG+VIVTKI SEHN+ADPFTK LTAKVFE HLE LGL+
Subjt:  VHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQ

A0A5D3CPJ6 Gag/pol protein1.0e-30665.21Show/hide
Query:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        MTKRPF+GKG+RAKEPL+L+HSD+CG MN+KAR G EYFI+F DDYSR+G++YLM HKSEALEKFKE+  EVEN L KTIKT RSDRGGEYMDLKFQNY+
Subjt:  MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------
        +E GI SQLSAPGTPQQNGVSERRNRTLLDMVRS+MSYAHLP+SFWGY V+TAVYILN VPSKSVSETP +LW GRK                       
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRK-----------------------

Query:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------
                  GYPK TRGG F+DPK++KVFVSTN  FLEEDHIR+HKP+SK+VL+EL                                           
Subjt:  ----------GYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVVLSEL-------------------------------------------

Query:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT
                            DG I                                            K   CKWIYKRKRG DGKVQTFKARLVAKGYT
Subjt:  --------------------DGTIAKV----------------------------------------TKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYT

Query:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------
        QVEGVDYEETFS VAM+KSIRILL+IAAY+DYE+W+MDVKT  LNGNLEE +YM QP+GFI PGQEQ    +N                           
Subjt:  QVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQ----MND--------------------------

Query:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF
           DEPCVYK+IIN SVAFL LYVDDILLIGND+G LTDIK WLATQFQMKDL +AQFVLGIQI R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPF
Subjt:  ---DEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPF

Query:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT
        RHG+ LSKEQCPKTPQ VE+MR IPYASAVGSLMYAMLCTRPDI +AVG+VSRYQSNPGL HWT VKTILKYLRRTR+Y LVYG+KDLILTGYTDSDFQT
Subjt:  RHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL
        D+DS+KSTSGSVFT+NGGAVVWR+IKQGCIADSTMEAEYV ACEAAK+ VWLR F+++L+VVPNM+ PITLYCDNSGAVANSREPRSHK+GKHIERKYHL
Subjt:  DKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHL

Query:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN
        IREIVHRG+VIVT+I S HNVADPFTK LTAKVFE HLE LGL+  P+
Subjt:  IREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFPN

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.5e-8025.32Show/hide
Query:  KEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIEHGITSQLSAPG
        K PL ++HSDVCG +         YF+ F+D ++ +   YL+ +KS+    F++F+ + E      +  L  D G EY+  + + + ++ GI+  L+ P 
Subjt:  KEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIEHGITSQLSAPG

Query:  TPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSV---SETPFELWKGRKGYPKETR-------------GGLFFDPKEDKVF
        TPQ NGVSER  RT+ +  R+++S A L  SFWG  V TA Y++N +PS+++   S+TP+E+W  +K Y K  R              G F D     +F
Subjt:  TPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSV---SETPFELWKGRKGYPKETR-------------GGLFFDPKEDKVF

Query:  V---------------------------------------------------------------------------------------------------
        V                                                                                                   
Subjt:  V---------------------------------------------------------------------------------------------------

Query:  --------------------STNVIFLEE-------DHIRDH------------------------------------------KPKSKVVLSELDGTIA
                             +N  FL E       DH+ +                                           K K ++  +E D ++ 
Subjt:  --------------------STNVIFLEE-------DHIRDH------------------------------------------KPKSKVVLSELDGTIA

Query:  KVTKN----------------------------------------------------TSCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSL
        KV  N                                                       +W++  K    G    +KARLVA+G+TQ   +DYEETF+ 
Subjt:  KVTKN----------------------------------------------------TSCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSL

Query:  VAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQMNDDEPCVYKK------------------------IINSSV-----
        VA + S R +L++   Y+ +V +MDVKT  LNG L+E +YM  P+G         N D  C   K                         +NSSV     
Subjt:  VAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQMNDDEPCVYKK------------------------IINSSV-----

Query:  ----------AFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHL-
                   ++ LYVDD+++   D+  + + K +L  +F+M DL + +  +GI+I    +   + LSQ++Y+ K+LS+F M++      P    I+  
Subjt:  ----------AFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHL-

Query:  ---SKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYG---AKDLILTGYTDSDFQT
           S E C             P  S +G LMY MLCTRPD+  AV ++SRY S    E W  +K +L+YL+ T +  L++    A +  + GY DSD+  
Subjt:  ---SKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYG---AKDLILTGYTDSDFQT

Query:  DKDSQKSTSGSVFTV-NGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYH
         +  +KST+G +F + +   + W   +Q  +A S+ EAEY+   EA ++ +WL+  + ++ +   +  PI +Y DN G ++ +  P  HK+ KHI+ KYH
Subjt:  DKDSQKSTSGSVFTV-NGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYH

Query:  LIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGL
          RE V    + +  I +E+ +AD FTK L A  F    + LGL
Subjt:  LIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGL

P0CV72 Secreted RxLR effector protein 1612.4e-2645.11Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVY-GAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGA
        M+ +PY SAVG++MY M+ TRPD+  AVG++S++ S+P   HW  +K +L+YL+ T+ Y L +  A    L GY+D+D+  D +S++STSG +F +NGG 
Subjt:  MRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVY-GAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGA

Query:  VVWRNIKQGCIADSTMEAEYVEACEAAKKVVWL
        V WR+ KQ  +A S+ E EY+   EA ++ VWL
Subjt:  VVWRNIKQGCIADSTMEAEYVEACEAAKKVVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-13434.69Show/hide
Query:  FSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIEHGI
        F     R    LDL++SDVCG M I++  G +YF++FIDD SR   +Y++  K +  + F++F   VE + G+ +K LRSD GGEY   +F+ Y   HGI
Subjt:  FSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIEHGI

Query:  TSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFELWKGRK---------------------------
          + + PGTPQ NGV+ER NRT+++ VRS++  A LP SFWG  V+TA Y++N  PS  ++ E P  +W  ++                           
Subjt:  TSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFELWKGRK---------------------------

Query:  --------GYPKETRGGLFFDPKEDKVFVSTNVIFL----------------------------------------------------------------
                GY  E  G   +DP + KV  S +V+F                                                                 
Subjt:  --------GYPKETRGGLFFDPKEDKVFVSTNVIFL----------------------------------------------------------------

Query:  --------EEDH------------------------IRDHKPKS-KVVLS------------------ELDGT-----IAKVTKNTSCKWIYKRKRGVDG
                EE H                          D +P+S K VLS                  + +GT     + K  +   CKW++K K+  D 
Subjt:  --------EEDH------------------------IRDHKPKS-KVVLS------------------ELDGT-----IAKVTKNTSCKWIYKRKRGVDG

Query:  KVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQM-----------------
        K+  +KARLV KG+ Q +G+D++E FS V  + SIR +L++AA  D EV ++DVKT  L+G+LEE +YM+QP+GF   G++ M                 
Subjt:  KVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQM-----------------

Query:  ----------------NDDEPCVY-KKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKV
                           +PCVY K+   ++   L LYVDD+L++G D G +  +K  L+  F MKDL  AQ +LG++IVR R ++ L LSQ  YI++V
Subjt:  ----------------NDDEPCVY-KKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKV

Query:  LSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYG
        L RF M+++K    P    + LSK+ CP T +   +M ++PY+SAVGSLMYAM+CTRPDI  AVG+VSR+  NPG EHW  VK IL+YLR T    L +G
Subjt:  LSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYG

Query:  AKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSRE
          D IL GYTD+D   D D++KS++G +FT +GGA+ W++  Q C+A ST EAEY+ A E  K+++WL++F+  L +         +YCD+  A+  S+ 
Subjt:  AKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSRE

Query:  PRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGL
           H + KHI+ +YH IRE+V    + V KI +  N AD  TK +    FE   E +G+
Subjt:  PRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.0e-6123.58Show/hide
Query:  KRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIE
        K PFS     +  PL+ I+SDV     I +     Y++ F+D ++R+  +Y +  KS+  E F  F   +EN+    I T  SD GGE++ L    Y  +
Subjt:  KRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIE

Query:  HGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFEL--------------------W--------
        HGI+   S P TP+ NG+SER++R +++   +++S+A +P ++W Y    AVY++N +P+  +  E+PF+                     W        
Subjt:  HGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFEL--------------------W--------

Query:  ---KGRK----GYPKETRGGLFFDPKEDKVFVSTNVIFLE---------------------------------------------EDHIRDHKP------
           K R+    GY       L    +  ++++S +V F E                                             + H     P      
Subjt:  ---KGRK----GYPKETRGGLFFDPKEDKVFVSTNVIFLE---------------------------------------------EDHIRDHKP------

Query:  --KSKVVLSELDGT--------------------------------------------------------------------------------------
           S+V  S LD +                                                                                      
Subjt:  --KSKVVLSELDGT--------------------------------------------------------------------------------------

Query:  -----IAKVTKNTS-------------------------------------------------------------------------------CKWIYKR
             +A++  N +                                                                               C+WI+ +
Subjt:  -----IAKVTKNTS-------------------------------------------------------------------------------CKWIYKR

Query:  KRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQ--------------
        K   DG +  +KARLVAKGY Q  G+DY ETFS V    SIRI+L +A    + + ++DV    L G L +++YM QP GFI+  +              
Subjt:  KRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQ--------------

Query:  ---------------------EQMNDDEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQ
                               ++D    V ++    S+ ++ +YVDDIL+ GND   L +  D L+ +F +KD  +  + LGI+    R    L LSQ
Subjt:  ---------------------EQMNDDEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQ

Query:  ASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTR
          YI  +L+R  M  +K    P      LS     K     E      Y   VGSL Y +  TRPDI +AV  +S++   P  EH   +K IL+YL  T 
Subjt:  ASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTR

Query:  NY-MLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNS
        N+ + +     L L  Y+D+D+  DKD   ST+G +  +    + W + KQ  +  S+ EAEY      + ++ W+   +  L +   +T P  +YCDN 
Subjt:  NY-MLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNS

Query:  GAVANSREPRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFP
        GA      P  H + KHI   YH IR  V  G + V  + +   +AD  TK L+   F++    +G+   P
Subjt:  GAVANSREPRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.0e-5730.83Show/hide
Query:  CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQMNDDE
        C+WI+ +K   DG +  +KARLVAKGY Q  G+DY ETFS V    SIRI+L +A    + + ++DV    L G L + +YM QP GF++  +     D 
Subjt:  CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQEQMNDDE

Query:  PCVYKKII-------------------------------------NSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNR
         C  +K I                                       S+ ++ +YVDDIL+ GND   L    D L+ +F +K+  D  + LGI+    R
Subjt:  PCVYKKII-------------------------------------NSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNR

Query:  KNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKT
          + L LSQ  Y   +L+R  M  +K    P      L+     K P   E      Y   VGSL Y +  TRPD+ +AV  +S+Y   P  +HW  +K 
Subjt:  KNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKT

Query:  ILKYLRRTRNY-MLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTL
        +L+YL  T ++ + +     L L  Y+D+D+  D D   ST+G +  +    + W + KQ  +  S+ EAEY      + ++ W+   +  L +   ++ 
Subjt:  ILKYLRRTRNY-MLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTL

Query:  PITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFP
        P  +YCDN GA      P  H + KHI   YH IR  V  G + V  + +   +AD  TK L+   F++    +G+   P
Subjt:  PITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKALTAKVFESHLECLGLQVFP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.6e-2534.88Show/hide
Query:  KRPFSGKGYRAKEPLDLIHSDVCG--LMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM
        K PFS     + +PL+ I+SDV    +++I   R   Y++ F+D ++R+  +Y +  KS+  + F  F + VEN+    I TL SD GGE++ L+  +Y+
Subjt:  KRPFSGKGYRAKEPLDLIHSDVCG--LMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYM

Query:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFE
         +HGI+   S P TP+ NG+SER++R +++M  +++S+A +P ++W Y    AVY++N +P+  +  ++PF+
Subjt:  IEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.6e-5229.37Show/hide
Query:  TIAKVTKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIE
        T+    K   CKW+YK K   DG ++ +KARLVAKGYTQ EG+D+ ETFS V  + S++++LAI+A Y++ + ++D+    LNG+L+E +YM  P G+  
Subjt:  TIAKVTKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIE

Query:  PGQEQMNDDEPCVYKKIIN-----------------------------------SSVAFL--TLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQF
           + +  +  C  KK I                                    ++  FL   +YVDDI++  N+   + ++K  L + F+++DL   ++
Subjt:  PGQEQMNDDEPCVYKKIIN-----------------------------------SSVAFL--TLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQF

Query:  VLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNP
         LG++I R+     + + Q  Y   +L    +   K   +P    +  S           + +    Y   +G LMY  + TR DI FAV  +S++   P
Subjt:  VLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNP

Query:  GLEHWTTVKTILKYLRRTRNYMLVYGAK-DLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFML
         L H   V  IL Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+++ST+G    +    + W++ KQ  ++ S+ EAEY     A  +++WL +F  
Subjt:  GLEHWTTVKTILKYLRRTRNYMLVYGAK-DLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFML

Query:  NLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIRE
         L++   ++ P  L+CDN+ A+  +     H++ KHIE   H +RE
Subjt:  NLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.0e-0434.72Show/hide
Query:  TRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGA-KDLILTGYTDSDFQTDKDSQKSTSG
        TRPD+ FAV  +S++ S         V  +L Y++ T    L Y A  DL L  + DSD+ +  D+++S +G
Subjt:  TRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGA-KDLILTGYTDSDFQTDKDSQKSTSG

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-1829.91Show/hide
Query:  FLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRV
        +L LYVDDILL G+    L  +   L++ F MKDL    + LGIQI  +     L LSQ  Y +++L+   M D K    P    ++ S     K P   
Subjt:  FLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQRV

Query:  EDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNY-MLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNG
        +      + S VG+L Y  L TRPDI +AV +V +    P L  +  +K +L+Y++ T  + + ++    L +  + DSD+     +++ST+G    +  
Subjt:  EDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNY-MLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNG

Query:  GAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVW
          + W   +Q  ++ S+ E EY      A ++ W
Subjt:  GAVVWRNIKQGCIADSTMEAEYVEACEAAKKVVW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.0e-0747.27Show/hide
Query:  CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIA
        CKW++K K   DG +   KARLVAKG+ Q EG+ + ET+S V    +IR +L +A
Subjt:  CKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAAGACCTTTTAGTGGAAAAGGTTATAGAGCCAAAGAACCTCTTGATCTTATACATTCGGACGTTTGTGGTCTGATGAATATTAAAGCCAGGAGAGGATGTGA
ATATTTCATCTCTTTTATAGATGATTATTCTAGATTTGGGCATATTTACCTAATGCACCACAAGTCTGAAGCACTTGAAAAGTTCAAGGAATTCATGACTGAGGTTGAAA
ATCAATTAGGTAAAACTATTAAAACACTTCGATCGGATCGAGGTGGAGAGTACATGGATCTAAAATTCCAGAACTATATGATAGAACATGGAATTACATCCCAACTCTCA
GCTCCCGGCACACCTCAGCAAAACGGTGTATCGGAAAGGAGAAATAGAACCTTGTTGGACATGGTTCGATCAATTATGAGTTATGCTCATCTCCCTAGTTCCTTTTGGGG
TTACACAGTGGAGACTGCAGTATACATTTTGAATAATGTGCCCTCAAAAAGTGTCTCTGAAACACCTTTTGAACTCTGGAAAGGACGTAAAGGCTACCCAAAAGAAACAA
GAGGTGGTTTATTCTTTGATCCTAAGGAAGATAAGGTTTTTGTGTCGACAAATGTCATTTTCTTAGAGGAGGACCACATAAGGGACCACAAACCAAAAAGTAAAGTAGTA
TTGAGTGAATTAGACGGAACAATAGCAAAGGTTACTAAGAACACTAGTTGTAAATGGATCTACAAGAGAAAGCGTGGTGTAGATGGGAAGGTGCAAACCTTTAAAGCTAG
ACTAGTAGCGAAGGGTTATACCCAGGTTGAAGGGGTTGACTATGAGGAGACCTTTTCACTTGTTGCTATGGTAAAGTCTATCCGTATCCTTCTCGCCATTGCCGCATATT
ATGACTATGAGGTATGGAAAATGGATGTCAAAACAACCATTTTGAATGGCAATCTTGAGGAAAACATGTACATGGACCAACCCAAAGGGTTCATTGAACCAGGACAAGAG
CAAATGAATGATGATGAACCTTGTGTCTACAAGAAAATCATCAATAGTTCTGTCGCATTCCTAACTCTCTACGTGGATGATATCCTACTCATTGGGAATGATGTAGGTTA
TCTTACTGACATTAAGGATTGGCTAGCTACACAATTCCAAATGAAAGATTTGGCTGATGCACAGTTTGTTCTTGGGATCCAGATTGTCCGGAACCGCAAGAATAAAACAC
TAGCCTTGTCTCAAGCATCTTACATAGACAAAGTGTTGTCAAGATTTAAGATGCAAGATTCCAAAAAGGGCTTGTTGCCTTTTAGACATGGAATTCATTTGTCTAAGGAA
CAGTGTCCTAAGACACCTCAAAGAGTTGAGGATATGAGACGGATTCCTTATGCATCAGCTGTTGGGAGCCTGATGTACGCCATGTTGTGTACAAGGCCTGACATCTATTT
TGCAGTTGGAATGGTTAGTAGGTATCAATCCAATCCAGGACTTGAACACTGGACAACGGTTAAAACAATCCTTAAGTATCTTCGGAGAACAAGGAACTACATGCTTGTGT
ATGGGGCTAAGGATTTGATCCTTACAGGATACACGGATTCTGACTTTCAGACTGATAAAGATTCTCAGAAATCTACATCAGGGTCAGTATTTACTGTTAACGGAGGAGCT
GTAGTATGGCGAAACATCAAGCAAGGATGCATCGCTGATTCTACCATGGAGGCCGAATATGTAGAAGCTTGTGAAGCAGCTAAGAAGGTCGTTTGGTTAAGGAAATTCAT
GCTAAATTTGAAAGTTGTTCCAAATATGACTTTGCCCATCACGCTGTATTGTGATAACAGTGGTGCAGTGGCAAATTCAAGGGAACCCAGAAGTCACAAGAAGGGAAAGC
ACATAGAGCGGAAGTATCATCTCATCCGGGAGATCGTGCATAGAGGAGAAGTGATTGTCACGAAGATAGTCTCAGAGCACAACGTTGCTGATCCTTTTACAAAGGCTCTC
ACGGCTAAAGTATTTGAGAGTCACCTAGAATGTCTAGGTTTACAAGTCTTCCCCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAAGACCTTTTAGTGGAAAAGGTTATAGAGCCAAAGAACCTCTTGATCTTATACATTCGGACGTTTGTGGTCTGATGAATATTAAAGCCAGGAGAGGATGTGA
ATATTTCATCTCTTTTATAGATGATTATTCTAGATTTGGGCATATTTACCTAATGCACCACAAGTCTGAAGCACTTGAAAAGTTCAAGGAATTCATGACTGAGGTTGAAA
ATCAATTAGGTAAAACTATTAAAACACTTCGATCGGATCGAGGTGGAGAGTACATGGATCTAAAATTCCAGAACTATATGATAGAACATGGAATTACATCCCAACTCTCA
GCTCCCGGCACACCTCAGCAAAACGGTGTATCGGAAAGGAGAAATAGAACCTTGTTGGACATGGTTCGATCAATTATGAGTTATGCTCATCTCCCTAGTTCCTTTTGGGG
TTACACAGTGGAGACTGCAGTATACATTTTGAATAATGTGCCCTCAAAAAGTGTCTCTGAAACACCTTTTGAACTCTGGAAAGGACGTAAAGGCTACCCAAAAGAAACAA
GAGGTGGTTTATTCTTTGATCCTAAGGAAGATAAGGTTTTTGTGTCGACAAATGTCATTTTCTTAGAGGAGGACCACATAAGGGACCACAAACCAAAAAGTAAAGTAGTA
TTGAGTGAATTAGACGGAACAATAGCAAAGGTTACTAAGAACACTAGTTGTAAATGGATCTACAAGAGAAAGCGTGGTGTAGATGGGAAGGTGCAAACCTTTAAAGCTAG
ACTAGTAGCGAAGGGTTATACCCAGGTTGAAGGGGTTGACTATGAGGAGACCTTTTCACTTGTTGCTATGGTAAAGTCTATCCGTATCCTTCTCGCCATTGCCGCATATT
ATGACTATGAGGTATGGAAAATGGATGTCAAAACAACCATTTTGAATGGCAATCTTGAGGAAAACATGTACATGGACCAACCCAAAGGGTTCATTGAACCAGGACAAGAG
CAAATGAATGATGATGAACCTTGTGTCTACAAGAAAATCATCAATAGTTCTGTCGCATTCCTAACTCTCTACGTGGATGATATCCTACTCATTGGGAATGATGTAGGTTA
TCTTACTGACATTAAGGATTGGCTAGCTACACAATTCCAAATGAAAGATTTGGCTGATGCACAGTTTGTTCTTGGGATCCAGATTGTCCGGAACCGCAAGAATAAAACAC
TAGCCTTGTCTCAAGCATCTTACATAGACAAAGTGTTGTCAAGATTTAAGATGCAAGATTCCAAAAAGGGCTTGTTGCCTTTTAGACATGGAATTCATTTGTCTAAGGAA
CAGTGTCCTAAGACACCTCAAAGAGTTGAGGATATGAGACGGATTCCTTATGCATCAGCTGTTGGGAGCCTGATGTACGCCATGTTGTGTACAAGGCCTGACATCTATTT
TGCAGTTGGAATGGTTAGTAGGTATCAATCCAATCCAGGACTTGAACACTGGACAACGGTTAAAACAATCCTTAAGTATCTTCGGAGAACAAGGAACTACATGCTTGTGT
ATGGGGCTAAGGATTTGATCCTTACAGGATACACGGATTCTGACTTTCAGACTGATAAAGATTCTCAGAAATCTACATCAGGGTCAGTATTTACTGTTAACGGAGGAGCT
GTAGTATGGCGAAACATCAAGCAAGGATGCATCGCTGATTCTACCATGGAGGCCGAATATGTAGAAGCTTGTGAAGCAGCTAAGAAGGTCGTTTGGTTAAGGAAATTCAT
GCTAAATTTGAAAGTTGTTCCAAATATGACTTTGCCCATCACGCTGTATTGTGATAACAGTGGTGCAGTGGCAAATTCAAGGGAACCCAGAAGTCACAAGAAGGGAAAGC
ACATAGAGCGGAAGTATCATCTCATCCGGGAGATCGTGCATAGAGGAGAAGTGATTGTCACGAAGATAGTCTCAGAGCACAACGTTGCTGATCCTTTTACAAAGGCTCTC
ACGGCTAAAGTATTTGAGAGTCACCTAGAATGTCTAGGTTTACAAGTCTTCCCCAACTAG
Protein sequenceShow/hide protein sequence
MTKRPFSGKGYRAKEPLDLIHSDVCGLMNIKARRGCEYFISFIDDYSRFGHIYLMHHKSEALEKFKEFMTEVENQLGKTIKTLRSDRGGEYMDLKFQNYMIEHGITSQLS
APGTPQQNGVSERRNRTLLDMVRSIMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFELWKGRKGYPKETRGGLFFDPKEDKVFVSTNVIFLEEDHIRDHKPKSKVV
LSELDGTIAKVTKNTSCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSLVAMVKSIRILLAIAAYYDYEVWKMDVKTTILNGNLEENMYMDQPKGFIEPGQE
QMNDDEPCVYKKIINSSVAFLTLYVDDILLIGNDVGYLTDIKDWLATQFQMKDLADAQFVLGIQIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKE
QCPKTPQRVEDMRRIPYASAVGSLMYAMLCTRPDIYFAVGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLILTGYTDSDFQTDKDSQKSTSGSVFTVNGGA
VVWRNIKQGCIADSTMEAEYVEACEAAKKVVWLRKFMLNLKVVPNMTLPITLYCDNSGAVANSREPRSHKKGKHIERKYHLIREIVHRGEVIVTKIVSEHNVADPFTKAL
TAKVFESHLECLGLQVFPN