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Tan0007650 (gene) of Snake gourd v1 genome

Gene IDTan0007650
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMitochondrial import inner membrane translocase subunit
Genome locationLG07:3845128..3852284
RNA-Seq ExpressionTan0007650
SyntenyTan0007650
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0042719 - mitochondrial intermembrane space protein transporter complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily
IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145880.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus]6.5e-3898.85Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_022159838.1 mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia]1.2e-3695.4Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSG SSQFSA+EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_022929052.1 mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata]1.9e-3797.7Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSSQFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_023520535.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo subsp. pepo]1.6e-3696.55Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSSQFS NEFRDQLKTQLAQAYAEEFLETLRVKCF KCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_038906948.1 mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida]1.7e-38100Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

TrEMBL top hitse value%identityAlignment
A0A0A0KK66 Mitochondrial import inner membrane translocase subunit3.1e-3898.85Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A1S3AUN2 Mitochondrial import inner membrane translocase subunit3.1e-3898.85Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1DZZ6 Mitochondrial import inner membrane translocase subunit5.9e-3795.4Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSG SSQFSA+EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1ELP2 Mitochondrial import inner membrane translocase subunit9.1e-3897.7Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSSQFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1I4K9 Mitochondrial import inner membrane translocase subunit9.1e-3897.7Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSSQFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

SwissProt top hitse value%identityAlignment
Q10481 Mitochondrial import inner membrane translocase subunit tim137.0e-1146.38Show/hide
Query:  SSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR
        SS+   + F  Q++ +LA A A E +  +   CFDKCI +PGS+   +E SC+S+CMERY++A +IVSR
Subjt:  SSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR

Q6DGJ3 Mitochondrial import inner membrane translocase subunit Tim134.8e-1249.4Show/hide
Query:  MDSFSSP-SSGSSS-QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
        M+ F S  SSGSSS +       +Q+K Q+A A A+E L+ +  KCF KCI KPGS+L  SE  CI+ CM+RY++A + VSRA
Subjt:  MDSFSSP-SSGSSS-QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA

Q8AVK1 Mitochondrial import inner membrane translocase subunit Tim13-B6.3e-1246.43Show/hide
Query:  MDSFSSPSS---GSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
        MD F S  S    SS +       +Q+K Q+A A A+E L+ +  KCF KCI KPG SL  SE  C++ CM+RY++A +IVSRA
Subjt:  MDSFSSPSS---GSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA

Q9XGY5 Mitochondrial import inner membrane translocase subunit Tim131.2e-2372.94Show/hide
Query:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT
        MDSFSS SSGS     A    DQ+K QLAQAYA+EFLET+  KCF KC+TKPGSSLSGSESSCISRC++RYIEAT IVSRALF +
Subjt:  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT

Q9XH48 Mitochondrial import inner membrane translocase subunit TIM132.9e-2570.24Show/hide
Query:  MDSFSS-PSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        MDS+SS P  GS S  S     + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  MDSFSS-PSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF

Arabidopsis top hitse value%identityAlignment
AT1G61570.1 translocase of the inner mitochondrial membrane 132.1e-2670.24Show/hide
Query:  MDSFSS-PSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        MDS+SS P  GS S  S     + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  MDSFSS-PSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF

AT5G50810.1 translocase inner membrane subunit 84.1e-0637.93Show/hide
Query:  LKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR
        L  +  +A   E +  +   C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Subjt:  LKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATTTTCATCACCTTCAAGCGGCTCTTCTTCCCAATTTTCGGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCCCAGGCCTACGCCGAGGAGTTTCT
TGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGAGAGCAGTTGCATCTCCAGGTGCATGGAGCGCTATATTGAGG
CCACCAGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGA
mRNA sequenceShow/hide mRNA sequence
GGCATAGCCATCGCCTCCTTCGAAAGCAAAATCAGCTCTAGGGCGCAACCAAACTACAAAAGGGCAGTGGTTTATAGGGTTTTGCGACCACCGAACAAATGGATTCATTT
TCATCACCTTCAAGCGGCTCTTCTTCCCAATTTTCGGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCCCAGGCCTACGCCGAGGAGTTTCTTGAGACCTTAAG
AGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGAGAGCAGTTGCATCTCCAGGTGCATGGAGCGCTATATTGAGGCCACCAGCATCG
TCAGTAGAGCCCTGTTTAAGACACCACACTGAAAGAAAGGTTTTGCTGAGACATTATGATTTCGAGGTATCTTTAGCAACCTACAATTTTTCTGAGATTCCCCATTTGAT
ATTTTGTTTTCCAGCTCTAGAATCTTTCGTCAGGAGACATACTTTTGATTTGAGGCCCCATAGATAATATTATTGGTATCATGTACCTGATTTACTGACACGTCAACTTT
GGGTCAATTAAAACTCTCATTTCTTCTCAGTTAACTGTTCAACCAAAGCTGATCAGATACTATTGGTCGAATAAAATAGATGAGTGGCTAGAACGAGGTGAAATGACCTT
GAACCTTTCACTGATAGCAAATTTCAGATGATTCTTTGAAGATTAGGATAACATATTTTAAACTAGGCCAAAAAACATGGTCACTTTAAATGAATGAGGTTGAAAATATC
TTTACCAAATTTGATCAATGATAAATAAAGAAATTGACATGATGGTGTTGATCAACTCTCTAATCGATGCTCCATGATGCAAGCAAAT
Protein sequenceShow/hide protein sequence
MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH