; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007705 (gene) of Snake gourd v1 genome

Gene IDTan0007705
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG01:102588455..102589853
RNA-Seq ExpressionTan0007705
SyntenyTan0007705
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030117 - membrane coat (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR033443 - Pentacotripeptide-repeat region of PRORP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024539.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-13980.88Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA+  NRVL LAK GSSR+PL+L+E H+R   RRFVSTD SNSI NPL+LRL+QEPSSSVKSVLDS ENAFL SS+LSW ALV SL+SSS PKKAQL LE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLEKMSK NERDPDFYIDLIRLCGELQN  LAMRVFTAMEFQGVKPTVTAFNSLIE C+SSHNMITAFS+FE+MKNSES KPNADTF  FISAFAK  D
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SM++W SAKRAF FS DLRTYEALIHGSVKSKCFDFAVRCF+EMM SGIVPN IIL+NMLEG CKRK+LDE+KKFL VV DKGWEINWNV EK+I I 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKS
        F SGE EGMEE+LTKLN++
Subjt:  FGSGEVEGMEELLTKLNKS

XP_022148798.1 pentatricopeptide repeat-containing protein At3g48810-like [Momordica charantia]2.6e-14080.43Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MAL W+RVL LAK GSSRI LQL E  +R  SR F STDHSN  SNPLLLRLLQEPSSSVKSVLDS E+AFLCSS++S  +LVRSL+SSS PKKAQLVLE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLE+MSK NE DPD YIDLIRLCGELQNF LAMRVF AMEFQGVKPT   FNSL+EACLSSHNMITAFSIFEVMKNSES+KPNADTFTSFISAFA+L D
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        VDSMQ+W SAKRAFGFSPDL+TYE+LI+GSV+SKCFDFAVRCFEEMM SGIVPN IILENM+EGLCKRKN +EVKKFLN+VFD GWEI+  VA+K+IR  
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPDADS
        F  G V+GMEELLTKL+KSNLAPD  S
Subjt:  FGSGEVEGMEELLTKLNKSNLAPDADS

XP_022975914.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima]1.0e-13980.88Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA+  NRVL LAK GSSRIPL+L+E H+R   RRFVSTD SNSI NPL+LRL+QEPSSSVKSVLDS EN FL SS+LSW ALV SL+SSS PKKAQL LE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLEKM+K NERDPDFYIDLIRLCGELQN  LAMRVFTAMEFQGVKPTVTAFNSLIE C+SSHNMITAFS+FE+MKNSESFKPNADTF  FISAFAKLRD
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SM++W SAKRAF FS DLRTYEALIHGSV SKCFDFAVRCF+EMM SGIVPN IIL+NMLEG CKRK+LDE+KKFL VV DKGWEI WNV EK+I I 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKS
        F SGE EGMEE+LTKLN++
Subjt:  FGSGEVEGMEELLTKLNKS

XP_023534997.1 pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucurbita pepo subsp. pepo]4.2e-13880.25Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA+  NRVL LAK GSSRIPL+ +E H+R   RRFVSTD SNSI NP +LRL+QEPSSSVKSVLDS ENAFL +S+LSW ALV SL+SSS PKKAQL LE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLEKMSK NERDPDFYIDLIRLCGELQN  LAMRVFTAMEFQGVKPTVTAFNSLIE C+SSHNMITAFS+FE+MKNSES KPNADTF  FISAFAK  D
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SM++W SAKRAF FS DLRTYEALIHGSVKSKCFDFAVRCF+EMM SGIVPN IIL+NMLEG CKRK+LDE+KKFL VV DKGWEINWNV EK+I I 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKS
        F SGE EGMEE+LTKLN++
Subjt:  FGSGEVEGMEELLTKLNKS

XP_038897030.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benincasa hispida]7.9e-14583.23Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MALT  RVL LA SGSSRIPLQL++ H  LC RRFVSTD SN ISNPLLLRLLQEP+SSVKSVLDSQENAFLCSS+LS++ LV SL+SSS PKKAQLVLE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        W+LEKMSK NERDPDFYIDL+RLCGELQN  LAM VFT MEFQGVKPTVTAFNSLIEAC+SS NMITAFSIFEVMKNSES+KPN+DTF  FI  FAKL D
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SMQ+W SAK+AFGFSPDLRTYEALIHGSVKSKCFDFAV+CFEEMM SGIVPNTIILENMLEGLCKRKNLDEVKKFLNVV DKGWEINWNV  K+  I 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLA
        F SGE+EGMEE+LTK+NKSN A
Subjt:  FGSGEVEGMEELLTKLNKSNLA

TrEMBL top hitse value%identityAlignment
A0A1S3CS56 pentatricopeptide repeat-containing protein At3g09060-like7.5e-13376.54Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA T  RVL LA++ S  IPLQ ++ H+ L  R F STD S SI+NPLLL+LLQEP+SSVKSVLDSQEN FLCSS+LS + LV SL+SSS PKKAQLVLE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        W+LEKMSK NE DPD YI+LIRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIEAC+SSHNMITAF IFEVMKNS++FKPN DTF  FIS F+KLRD
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SMQ+W SAK+AF FSPDLRTYEALIHGSVKSKCFDFAV+CFEEMM S IVPN IILENMLEGLCKRKN DEVKKFLNVV D GWEINWNV EK+I + 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPD
        F SGE+EGM+E+LTK+NKSN A D
Subjt:  FGSGEVEGMEELLTKLNKSNLAPD

A0A5D3E5Z9 Pentatricopeptide repeat-containing protein7.5e-13376.54Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA T  RVL LA++ S  IPLQ ++ H+ L  R F STD S SI+NPLLL+LLQEP+SSVKSVLDSQEN FLCSS+LS + LV SL+SSS PKKAQLVLE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        W+LEKMSK NE DPD YI+LIRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIEAC+SSHNMITAF IFEVMKNS++FKPN DTF  FIS F+KLRD
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SMQ+W SAK+AF FSPDLRTYEALIHGSVKSKCFDFAV+CFEEMM S IVPN IILENMLEGLCKRKN DEVKKFLNVV D GWEINWNV EK+I + 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPD
        F SGE+EGM+E+LTK+NKSN A D
Subjt:  FGSGEVEGMEELLTKLNKSNLAPD

A0A6J1D545 pentatricopeptide repeat-containing protein At3g48810-like1.3e-14080.43Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MAL W+RVL LAK GSSRI LQL E  +R  SR F STDHSN  SNPLLLRLLQEPSSSVKSVLDS E+AFLCSS++S  +LVRSL+SSS PKKAQLVLE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLE+MSK NE DPD YIDLIRLCGELQNF LAMRVF AMEFQGVKPT   FNSL+EACLSSHNMITAFSIFEVMKNSES+KPNADTFTSFISAFA+L D
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        VDSMQ+W SAKRAFGFSPDL+TYE+LI+GSV+SKCFDFAVRCFEEMM SGIVPN IILENM+EGLCKRKN +EVKKFLN+VFD GWEI+  VA+K+IR  
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPDADS
        F  G V+GMEELLTKL+KSNLAPD  S
Subjt:  FGSGEVEGMEELLTKLNKSNLAPDADS

A0A6J1FC94 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X13.7e-13278.91Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA+  NRVL LAK GSSR+PL+L+E H+R   RRFVSTD SNSI NPL+LRL+QEPSSSVKSVLDS ENAFL SS LSW ALV SL+SSS PKKAQL LE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLEKMSK NERDPDFYIDLIRLCGELQN  LAMRVFTAMEFQGV+PTVTAFNSLIE C+SSHNMITAFS+FE+MKNSES KPNADTF  FISAFAK  D
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SM++W SA RAF FS DLRTYEALIHGSVKSKCFDFAVRCF+EMM SGIVPN IIL+NMLEG CKRK+LDE+KKFL VV DKGWEINWNV EK+I I 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELL
        F SG  +G    L
Subjt:  FGSGEVEGMEELL

A0A6J1II25 pentatricopeptide repeat-containing protein At2g37230-like isoform X14.8e-14080.88Show/hide
Query:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE
        MA+  NRVL LAK GSSRIPL+L+E H+R   RRFVSTD SNSI NPL+LRL+QEPSSSVKSVLDS EN FL SS+LSW ALV SL+SSS PKKAQL LE
Subjt:  MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLE

Query:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD
        WRLEKM+K NERDPDFYIDLIRLCGELQN  LAMRVFTAMEFQGVKPTVTAFNSLIE C+SSHNMITAFS+FE+MKNSESFKPNADTF  FISAFAKLRD
Subjt:  WRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V+SM++W SAKRAF FS DLRTYEALIHGSV SKCFDFAVRCF+EMM SGIVPN IIL+NMLEG CKRK+LDE+KKFL VV DKGWEI WNV EK+I I 
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKS
        F SGE EGMEE+LTKLN++
Subjt:  FGSGEVEGMEELLTKLNKS

SwissProt top hitse value%identityAlignment
Q9CAN0 Pentatricopeptide repeat-containing protein At1g63130, mitochondrial2.0e-1326.34Show/hide
Query:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD
        L+KM +G  E     Y  +I      +N   A+ +FT M+ +G++P V  +NSLI  CL ++   +  S            PN  TF++ I AF K  + 
Subjt:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V++ + +D   +     PD+ TY +LI+G       D A   FE M+     PN +    +++G CK K +DE  +    +  +G   N       I   
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPD
        F + E +  + +  ++    + PD
Subjt:  FGSGEVEGMEELLTKLNKSNLAPD

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461004.4e-1326.19Show/hide
Query:  YIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEA-CLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFG
        Y+ ++ +  E     LA + +  M   G+ PTV + N LI+A C +   +     IF  M       P++ T+ + IS   +   +D  +   +      
Subjt:  YIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEA-CLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFG

Query:  FSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTK
         +P + TY +LI+G   SK  D A+R  EEM   GI PN     ++++GLCK     +  +   ++  +G   N       I       +++   ELL +
Subjt:  FSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTK

Query:  LNKSNLAPDA
        +N   L PDA
Subjt:  LNKSNLAPDA

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic3.2e-1627.23Show/hide
Query:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD
        L+KM KG  E D   Y  +I      +N   A+ +FT M+ +G++P V  +NSLI  CL ++   +  S            PN  TF++ I AF K  + 
Subjt:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V++ + +D   +     PD+ TY +LI+G       D A   FE M+     PN +    +++G CK K ++E  +    +  +G   N       I+  
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPD
        F +G+ +  +++  K+    + PD
Subjt:  FGSGEVEGMEELLTKLNKSNLAPD

Q9M302 Pentatricopeptide repeat-containing protein At3g488102.7e-1522.86Show/hide
Query:  WSALVRSLMSSSLPKKAQLVLEWRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNS
        ++AL+  L      K A    E   E + KG   +   Y  LI +        LA    T M  +G  P +   +SL++ C        A  ++  M   
Subjt:  WSALVRSLMSSSLPKKAQLVLEWRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNS

Query:  ESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFL
           +PN   + + +  F    ++    S  S     G SP++RTY +LI+G  K    D AV  + +M+ SG  PN ++  NM+E LC+     E +  +
Subjt:  ESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFL

Query:  NVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNLAP
         ++  +    +      +I+    +G ++  E++  ++ + +  P
Subjt:  NVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNLAP

Q9M9X9 Pentatricopeptide repeat-containing protein At1g06710, mitochondrial2.0e-1326.11Show/hide
Query:  RLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLR
        R+CG      + M  F   +    +P V  + +L++    SH +  A  + + M + E  +PN   + + I    K+  +D  Q   +     GF   L 
Subjt:  RLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLR

Query:  TYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNL
        TY +LI    K K  D A +   +M+ +   PN +I   M++GLCK    DE  K + ++ +KG + N       I      G++E   ELL ++    +
Subjt:  TYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNL

Query:  APD
        AP+
Subjt:  APD

Arabidopsis top hitse value%identityAlignment
AT1G06710.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-1426.11Show/hide
Query:  RLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLR
        R+CG      + M  F   +    +P V  + +L++    SH +  A  + + M + E  +PN   + + I    K+  +D  Q   +     GF   L 
Subjt:  RLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLR

Query:  TYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNL
        TY +LI    K K  D A +   +M+ +   PN +I   M++GLCK    DE  K + ++ +KG + N       I      G++E   ELL ++    +
Subjt:  TYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNL

Query:  APD
        AP+
Subjt:  APD

AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-1727.23Show/hide
Query:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD
        L+KM KG  E D   Y  +I      +N   A+ +FT M+ +G++P V  +NSLI  CL ++   +  S            PN  TF++ I AF K  + 
Subjt:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V++ + +D   +     PD+ TY +LI+G       D A   FE M+     PN +    +++G CK K ++E  +    +  +G   N       I+  
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPD
        F +G+ +  +++  K+    + PD
Subjt:  FGSGEVEGMEELLTKLNKSNLAPD

AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-1426.34Show/hide
Query:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD
        L+KM +G  E     Y  +I      +N   A+ +FT M+ +G++P V  +NSLI  CL ++   +  S            PN  TF++ I AF K  + 
Subjt:  LEKMSKGN-ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKL-RD

Query:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC
        V++ + +D   +     PD+ TY +LI+G       D A   FE M+     PN +    +++G CK K +DE  +    +  +G   N       I   
Subjt:  VDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRIC

Query:  FGSGEVEGMEELLTKLNKSNLAPD
        F + E +  + +  ++    + PD
Subjt:  FGSGEVEGMEELLTKLNKSNLAPD

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-1622.86Show/hide
Query:  WSALVRSLMSSSLPKKAQLVLEWRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNS
        ++AL+  L      K A    E   E + KG   +   Y  LI +        LA    T M  +G  P +   +SL++ C        A  ++  M   
Subjt:  WSALVRSLMSSSLPKKAQLVLEWRLEKMSKGNERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNS

Query:  ESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFL
           +PN   + + +  F    ++    S  S     G SP++RTY +LI+G  K    D AV  + +M+ SG  PN ++  NM+E LC+     E +  +
Subjt:  ESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFL

Query:  NVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNLAP
         ++  +    +      +I+    +G ++  E++  ++ + +  P
Subjt:  NVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNLAP

AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein3.1e-1426.19Show/hide
Query:  YIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEA-CLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFG
        Y+ ++ +  E     LA + +  M   G+ PTV + N LI+A C +   +     IF  M       P++ T+ + IS   +   +D  +   +      
Subjt:  YIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEA-CLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFG

Query:  FSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTK
         +P + TY +LI+G   SK  D A+R  EEM   GI PN     ++++GLCK     +  +   ++  +G   N       I       +++   ELL +
Subjt:  FSPDLRTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTK

Query:  LNKSNLAPDA
        +N   L PDA
Subjt:  LNKSNLAPDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTAACTTGGAACAGGGTTTTGGTATTGGCCAAAAGCGGTTCCTCCAGGATTCCGCTACAGTTAAAGGAAGTTCATCATCGACTTTGTTCCCGTCGATTCGTTTC
TACTGATCACTCGAATTCGATTTCGAATCCTTTGCTTCTCAGGTTGCTTCAGGAGCCAAGTTCGTCTGTCAAATCCGTGCTCGATTCGCAGGAAAATGCTTTTCTCTGTA
GCTCCCAACTTTCCTGGAGTGCCCTCGTTAGGTCTCTTATGTCTTCTTCATTGCCTAAGAAGGCTCAGCTGGTTTTGGAGTGGAGATTGGAGAAAATGAGCAAAGGAAAT
GAGAGGGATCCTGATTTTTACATAGACCTGATTCGTTTATGTGGAGAGCTTCAAAATTTCACTCTTGCAATGCGTGTCTTCACTGCTATGGAATTTCAAGGAGTTAAACC
CACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTTTATCTTCGCATAATATGATAACTGCCTTCAGCATATTCGAAGTAATGAAAAACTCTGAAAGTTTTAAACCAA
ATGCTGACACTTTCACTTCTTTCATTTCGGCATTTGCCAAATTGCGCGATGTTGATTCCATGCAATCATGGGATTCGGCCAAAAGAGCATTTGGATTCTCTCCTGACCTT
CGAACCTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAATGCTTTGATTTTGCTGTTAGATGTTTTGAGGAAATGATGTTCTCTGGCATTGTGCCCAACACAATCAT
ATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAACTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGTTCGACAAAGGATGGGAGATCAATTGGAATGTGGCAG
AGAAGTACATTCGAATATGTTTTGGATCTGGGGAGGTGGAAGGGATGGAGGAGCTCCTTACCAAGCTTAATAAATCGAATCTGGCTCCCGATGCCGATAGTAAATCGTCG
TAA
mRNA sequenceShow/hide mRNA sequence
CGTAAATCATCACAAGCCACGACGGAAGCTCCGGCGACTGTCACGTATAAAAGCTCGAACGGCCATTGCACATACAGCCTAAACTATGGCGTTAACTTGGAACAGGGTTT
TGGTATTGGCCAAAAGCGGTTCCTCCAGGATTCCGCTACAGTTAAAGGAAGTTCATCATCGACTTTGTTCCCGTCGATTCGTTTCTACTGATCACTCGAATTCGATTTCG
AATCCTTTGCTTCTCAGGTTGCTTCAGGAGCCAAGTTCGTCTGTCAAATCCGTGCTCGATTCGCAGGAAAATGCTTTTCTCTGTAGCTCCCAACTTTCCTGGAGTGCCCT
CGTTAGGTCTCTTATGTCTTCTTCATTGCCTAAGAAGGCTCAGCTGGTTTTGGAGTGGAGATTGGAGAAAATGAGCAAAGGAAATGAGAGGGATCCTGATTTTTACATAG
ACCTGATTCGTTTATGTGGAGAGCTTCAAAATTTCACTCTTGCAATGCGTGTCTTCACTGCTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTT
ATAGAGGCTTGTTTATCTTCGCATAATATGATAACTGCCTTCAGCATATTCGAAGTAATGAAAAACTCTGAAAGTTTTAAACCAAATGCTGACACTTTCACTTCTTTCAT
TTCGGCATTTGCCAAATTGCGCGATGTTGATTCCATGCAATCATGGGATTCGGCCAAAAGAGCATTTGGATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATG
GTAGTGTGAAATCAAAATGCTTTGATTTTGCTGTTAGATGTTTTGAGGAAATGATGTTCTCTGGCATTGTGCCCAACACAATCATATTGGAGAATATGCTTGAAGGGCTC
TGTAAGAGGAAAAACTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGTTCGACAAAGGATGGGAGATCAATTGGAATGTGGCAGAGAAGTACATTCGAATATGTTTTGG
ATCTGGGGAGGTGGAAGGGATGGAGGAGCTCCTTACCAAGCTTAATAAATCGAATCTGGCTCCCGATGCCGATAGTAAATCGTCGTAA
Protein sequenceShow/hide protein sequence
MALTWNRVLVLAKSGSSRIPLQLKEVHHRLCSRRFVSTDHSNSISNPLLLRLLQEPSSSVKSVLDSQENAFLCSSQLSWSALVRSLMSSSLPKKAQLVLEWRLEKMSKGN
ERDPDFYIDLIRLCGELQNFTLAMRVFTAMEFQGVKPTVTAFNSLIEACLSSHNMITAFSIFEVMKNSESFKPNADTFTSFISAFAKLRDVDSMQSWDSAKRAFGFSPDL
RTYEALIHGSVKSKCFDFAVRCFEEMMFSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVFDKGWEINWNVAEKYIRICFGSGEVEGMEELLTKLNKSNLAPDADSKSS