; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007725 (gene) of Snake gourd v1 genome

Gene IDTan0007725
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPolyadenylate-binding protein 1-like
Genome locationLG01:4287595..4293209
RNA-Seq ExpressionTan0007725
SyntenyTan0007725
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453839.1 PREDICTED: polyadenylate-binding protein 1-like isoform X2 [Cucumis melo]5.2e-11997.4Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NY+YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        RRPF P AP YPSYGYGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

XP_011653101.1 polyadenylate-binding protein 1 isoform X1 [Cucumis sativus]3.1e-11997.4Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NYSYDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        RRPF+P AP YPSYGYGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

XP_022141261.1 polyadenylate-binding protein 1-like isoform X1 [Momordica charantia]2.0e-11896.12Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHN++Y+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR-
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFR 
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR-

Query:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        GRRPFMPAAPFYPSYGYGRVPR+RRPMRYRPY
Subjt:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

XP_022941798.1 polyadenylate-binding protein 1-like isoform X1 [Cucurbita moschata]1.2e-11896.12Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
        MEHN++YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY DAEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE

Query:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR
        EVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP+GFR
Subjt:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR

Query:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        GRRPFM  APFYPSYGYGRVPR+RRPMRYRPY
Subjt:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

XP_038876136.1 polyadenylate-binding protein 1-like isoform X1 [Benincasa hispida]1.4e-11997.84Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME N++YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        RRPFMPAAP YPSYGYGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

TrEMBL top hitse value%identityAlignment
A0A0A0KXP6 RRM domain-containing protein1.1e-11796.97Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NYSYDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        RRPF+P AP YPSYGYGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

A0A1S3BWP8 polyadenylate-binding protein 2-like isoform X11.8e-11796.97Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NY+YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        RRPF P AP YPSYGYGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

A0A1S3BYF0 polyadenylate-binding protein 1-like isoform X22.5e-11997.4Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NY+YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        RRPF P AP YPSYGYGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

A0A6J1CIL8 polyadenylate-binding protein 1-like isoform X19.6e-11996.12Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHN++Y+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR-
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFR 
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR-

Query:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        GRRPFMPAAPFYPSYGYGRVPR+RRPMRYRPY
Subjt:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

A0A6J1FT42 polyadenylate-binding protein 1-like isoform X15.6e-11996.12Show/hide
Query:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
        MEHN++YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY DAEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
Subjt:  MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE

Query:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR
        EVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP+GFR
Subjt:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR

Query:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        GRRPFM  APFYPSYGYGRVPR+RRPMRYRPY
Subjt:  GRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 27.5e-3651.72Show/hide
Query:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        D +  +   K+L +MK R+ E+E EA  LR MQ +++ E          T A + +KE +D++SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFMPAAPFYPSY
        GHPKGFAY+EF E   V NALLLN S LH R LKV+ KRTNVPGM + RGR       RGR  +   A  +  Y
Subjt:  GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFMPAAPFYPSY

Q28ZX3 Polyadenylate-binding protein 22.8e-3046.63Show/hide
Query:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM-GAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF
        + E S     +LE +K R+KE+EEEA  +++MQ++V+K+M G      ++   +  EK+E+D+RSVYVGNVDY  + EE++ HF  CGT+NRVTIL +K 
Subjt:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM-GAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF

Query:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRR
         GHPKGFAY+EF   + V+ AL +NE+   GRQ+KV +KRTN PG+          F  RG R
Subjt:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRR

Q93VI4 Polyadenylate-binding protein 12.4e-8272.73Show/hide
Query:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
         R FMP  PFYP Y YGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

Q9FJN9 Polyadenylate-binding protein 22.8e-7569.03Show/hide
Query:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY
        +E EHEVYGG+IPD  EMD D++  +   D    D +      K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD+RSV+
Subjt:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY

Query:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFMP
        VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NP+ G+R RRPFM 
Subjt:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFMP

Query:  AAPF-YPSYGYGRVPRYRRPMRYRPY
         +P+ Y  YGYG+ PR+RRPMRY PY
Subjt:  AAPF-YPSYGYGRVPRYRRPMRYRPY

Q9LX90 Polyadenylate-binding protein 33.4e-7369.3Show/hide
Query:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP

Query:  FMPAAPFYPSYGYGRVPRYRRPMRYRPY
        F+P   FY  YGYG+ PR+RRPMRY PY
Subjt:  FMPAAPFYPSYGYGRVPRYRRPMRYRPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-7469.3Show/hide
Query:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP

Query:  FMPAAPFYPSYGYGRVPRYRRPMRYRPY
        F+P   FY  YGYG+ PR+RRPMRY PY
Subjt:  FMPAAPFYPSYGYGRVPRYRRPMRYRPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.9e-6869.16Show/hide
Query:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP

Query:  FMPAAPFYPSYGYG
        F+P   FY  YGYG
Subjt:  FMPAAPFYPSYGYG

AT5G51120.1 polyadenylate-binding protein 11.7e-8372.73Show/hide
Query:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG

Query:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
         R FMP  PFYP Y YGRVPR+RRPMRYRPY
Subjt:  RRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

AT5G51120.2 polyadenylate-binding protein 13.6e-7861.8Show/hide
Query:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q                
Subjt:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------

Query:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE
                            ++  ++  + AEKEEVDSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNE
Subjt:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE

Query:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY
        SELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R FMP  PFYP Y YGRVPR+RRPMRYRPY
Subjt:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPFMPAAPFYPSYGYGRVPRYRRPMRYRPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-7669.03Show/hide
Query:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY
        +E EHEVYGG+IPD  EMD D++  +   D    D +      K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD+RSV+
Subjt:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY

Query:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFMP
        VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NP+ G+R RRPFM 
Subjt:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFMP

Query:  AAPF-YPSYGYGRVPRYRRPMRYRPY
         +P+ Y  YGYG+ PR+RRPMRY PY
Subjt:  AAPF-YPSYGYGRVPRYRRPMRYRPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACAATTACAGCTACGACGAGCACGAGCACGAAGTTTATGGTGGCGATATTCCTGACGACGCTGAGATGGATGCCGACCTCGACATGTCCTCTGGTAGGGCCGA
CGAAGAAGGCTACGACGCCGAGCCTAGTAACGCCAACTCGAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGC
AGGCCAAGGTTGAGAAGGAGATGGGCGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGGTAAT
GTTGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGAACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGTCACCCCAAGGGGTTTGC
TTATGTTGAGTTCGTGGAGGTTGATGCTGTACAGAATGCTTTGCTGTTGAATGAGTCAGAGTTGCACGGTCGCCAACTGAAGGTCTCTGCCAAGAGGACAAATGTCCCTG
GCATGAAGCAATACCGAGGAAGGCGGCCAAACCCATTTGGCTTTCGAGGTCGCCGGCCATTCATGCCTGCTGCACCTTTTTATCCTTCGTATGGTTATGGAAGGGTTCCG
AGGTACAGGCGGCCGATGCGGTACAGACCCTACTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAGGCAGCAGGAATATGAAAGCCAGAGTCGCAGACAGGATCCGAAACCTAATCTTCAGCAATTGGGAACCAGTAGACAAAATACACATACCAACCAGCGATCGAGG
GGCCACCGGAGACGGAGATGGAGCACAATTACAGCTACGACGAGCACGAGCACGAAGTTTATGGTGGCGATATTCCTGACGACGCTGAGATGGATGCCGACCTCGACATG
TCCTCTGGTAGGGCCGACGAAGAAGGCTACGACGCCGAGCCTAGTAACGCCAACTCGAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGG
TGCCCTTCGGGAAATGCAGGCCAAGGTTGAGAAGGAGATGGGCGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAAGTAGATTCTCGAT
CTGTATATGTTGGTAATGTTGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGAACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGT
CACCCCAAGGGGTTTGCTTATGTTGAGTTCGTGGAGGTTGATGCTGTACAGAATGCTTTGCTGTTGAATGAGTCAGAGTTGCACGGTCGCCAACTGAAGGTCTCTGCCAA
GAGGACAAATGTCCCTGGCATGAAGCAATACCGAGGAAGGCGGCCAAACCCATTTGGCTTTCGAGGTCGCCGGCCATTCATGCCTGCTGCACCTTTTTATCCTTCGTATG
GTTATGGAAGGGTTCCGAGGTACAGGCGGCCGATGCGGTACAGACCCTACTAGGAGATATAATGCTCGTATTAATATCGCAAACTATTGTTCGGGTTCTACTGTTTCTTG
GTTGAGGGTTCAATTACCATCTCTATAACTTGGAGGGTGTGGAAAACATTGTACTCTATTGATGTTTAAAAATCTTACTTGAGTTTCTTTTATGAACTTGGTAGCAGTTT
CTAGCTTGAGGGGGTTAAGATTTGTTGTTTGCATTTTAGTTGGCTCTGGAAGGGCTAAAAACCATTAGAGAATTTGAAAGAAAGAAATTTAAGGAAACTAAAGGACATAT
CCTTTGTAGTTTTGTATGGTGAATTGAAATTGATCATGATGTAGAATTCTTTGTTATTTAAGAAGTAATTATAAGTTGATATGTAAACCTTTCTTCAG
Protein sequenceShow/hide protein sequence
MEHNYSYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGN
VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFMPAAPFYPSYGYGRVP
RYRRPMRYRPY