; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007726 (gene) of Snake gourd v1 genome

Gene IDTan0007726
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNigrin b-like
Genome locationLG01:7136283..7136756
RNA-Seq ExpressionTan0007726
SyntenyTan0007726
Gene Ontology termsNA
InterPro domainsIPR000772 - Ricin B, lectin domain
IPR035992 - Ricin B-like lectins


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600358.1 hypothetical protein SDJN03_05591, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4364.34Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V +EVN++ PSQSWE TE F P VANI WL+NLCL+S +  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G++VVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

XP_022941584.1 nigrin b-like isoform X1 [Cucurbita moschata]9.2e-4364.34Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V +EVN++ PSQSWE TE F P VANI WL+NLCL+S +  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G++VVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

XP_022941585.1 nigrin b-like isoform X2 [Cucurbita moschata]9.2e-4364.34Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V +EVN++ PSQSWE TE F P VANI WL+NLCL+S +  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G++VVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

XP_022982216.1 ribosome-inactivating protein SNAI-like [Cucurbita maxima]2.9e-4466.43Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V LE N+DAPSQSWE TE   P VANI WL+NLCL+SR+  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G+LVVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

XP_023551012.1 nigrin b-like [Cucurbita pepo subsp. pepo]4.6e-4262.94Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  G+ V +EVN++ PSQSWE TE F+P VANI WL+NLCL+S +  + +V+L EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TS +R+ G++VVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

TrEMBL top hitse value%identityAlignment
A0A5A7T854 Nigrin b-like2.8e-3758.74Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI H ESG+VL G S   YV L+ NK+ PSQSWE TE  +P +ANI WL NLCLQS    + HV L+ CN ++ +QRW A YGDGTI QN NRNYCL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        T SD  +G  +V+SKC  K QQ W+L  +D TI+HPNT++VMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

A0A5D3BL95 Nigrin b-like2.8e-3758.74Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI H ESG+VL G S   YV L+ NK+ PSQSWE TE  +P +ANI WL NLCLQS    + HV L+ CN ++ +QRW A YGDGTI QN NRNYCL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        T SD  +G  +V+SKC  K QQ W+L  +D TI+HPNT++VMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

A0A6J1FNV0 nigrin b-like isoform X14.5e-4364.34Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V +EVN++ PSQSWE TE F P VANI WL+NLCL+S +  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G++VVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

A0A6J1FU34 nigrin b-like isoform X24.5e-4364.34Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V +EVN++ PSQSWE TE F P VANI WL+NLCL+S +  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G++VVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

A0A6J1IYQ6 ribosome-inactivating protein SNAI-like1.4e-4466.43Show/hide
Query:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL
        KDGTI HDESGLVL  K  GR V LE N+DAPSQSWE TE   P VANI WL+NLCL+SR+  + +V+L+EC+  D NQRW A YGDGTI QNE R+ CL
Subjt:  KDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCL

Query:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        TSS+R+ G+LVVVS+C  K QQ W L  ED TINHPNTNLVMD
Subjt:  TSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

SwissProt top hitse value%identityAlignment
O22415 Ribosome-inactivating protein SNAIf6.2e-1840.28Show/hide
Query:  DGTIRHDESGLVL--PGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC
        DGTI +  SGLVL  P  + G  + LE N  A  Q W   +V  P V  I+  + +CL +    +  V L +C      Q W A YGDGTI  N NR+ C
Subjt:  DGTIRHDESGLVL--PGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC

Query:  LTSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        +TS D +   L+V+ KC G   Q W  N  + TI++PN  LVMD
Subjt:  LTSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

P28590 Abrin-c7.2e-1434.48Show/hide
Query:  DGTIRHDESGLVLPGK--SVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC
        +GTI + +S LVL  +  S+G  + ++ N+    Q W      SP V +I    +LC+Q++ +  W   L++C+     Q+W A Y DG+I   +N N C
Subjt:  DGTIRHDESGLVLPGK--SVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC

Query:  LTSSDRDVGSLVVVSKC-GGKSQQHWSLNKEDRTINHPNTNLVMD
        LTS D   GS +V+  C  G + Q W L K D +I + + ++VMD
Subjt:  LTSSDRDVGSLVVVSKC-GGKSQQHWSLNKEDRTINHPNTNLVMD

P93543 Ribosome-inactivating protein SNAI'6.9e-1739.04Show/hide
Query:  DGTIRHDESGLVL--PGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDN---NQRWAAFYGDGTIGQNENR
        DGTI +  SGLVL  P  + G  V LE N  A  Q W    V  P V  I+  E +CL++    +  VSL +C+ K     +Q+W A YGDGTI  N +R
Subjt:  DGTIRHDESGLVL--PGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDN---NQRWAAFYGDGTIGQNENR

Query:  NYCLTSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVM
        + C+TS  +     +++ KC G + Q W  N  D TI++P++ LVM
Subjt:  NYCLTSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVM

Q06076 Abrin-d2.7e-1334.48Show/hide
Query:  DGTIRHDESGLVLPGK--SVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC
        +GTI + +S LVL  +  S+G  + ++ N+    Q W      SP V +I    +LC+Q++ +  W   L++C+     Q+W A Y DG+I   +N N C
Subjt:  DGTIRHDESGLVLPGK--SVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC

Query:  LTSSDRDVGSLVVVSKC-GGKSQQHWSLNKEDRTINHPNTNLVMD
        LTS D   GS +V+  C  G + Q W L K D +I     ++VMD
Subjt:  LTSSDRDVGSLVVVSKC-GGKSQQHWSLNKEDRTINHPNTNLVMD

Q41358 Ribosome-inactivating protein SNAI6.2e-1839.58Show/hide
Query:  DGTIRHDESGLVL--PGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC
        DGTI +  SGLVL  P  + G  + LE N  A  Q W   +V  P V  I+  + +CL+     ++ V L +C      Q W A YGDGTI  N NR+ C
Subjt:  DGTIRHDESGLVL--PGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYC

Query:  LTSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD
        +TS D +   L+V+ KC G   Q W  N  + TI++PN  L+MD
Subjt:  LTSSDRDVGSLVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATGGAACCATACGCCATGACGAGTCGGGGCTCGTCCTGCCGGGAAAATCTGTAGGGAGATATGTAAAGTTGGAAGTGAATAAAGATGCACCATCACAGAGCTG
GGAAGGCACAGAAGTTTTCTCCCCAACGGTGGCCAATATCATGTGGCTTGAAAACTTGTGTTTGCAATCTAGAAAAGCTGTTGATTGGCATGTATCGTTGAGTGAGTGTA
ATGGAAAAGATAACAACCAAAGATGGGCGGCATTTTATGGGGATGGCACCATTGGACAAAATGAGAATAGAAACTATTGCTTGACTTCGTCCGACAGAGATGTTGGTTCT
TTGGTAGTTGTGTCTAAATGTGGAGGCAAGTCGCAACAACATTGGAGTCTCAACAAAGAAGACAGAACCATCAACCATCCCAACACCAACTTGGTCATGGATGCCACTTG
GGCTCTCGCCCCTGCCGCCAGTCATTTTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGATGGAACCATACGCCATGACGAGTCGGGGCTCGTCCTGCCGGGAAAATCTGTAGGGAGATATGTAAAGTTGGAAGTGAATAAAGATGCACCATCACAGAGCTG
GGAAGGCACAGAAGTTTTCTCCCCAACGGTGGCCAATATCATGTGGCTTGAAAACTTGTGTTTGCAATCTAGAAAAGCTGTTGATTGGCATGTATCGTTGAGTGAGTGTA
ATGGAAAAGATAACAACCAAAGATGGGCGGCATTTTATGGGGATGGCACCATTGGACAAAATGAGAATAGAAACTATTGCTTGACTTCGTCCGACAGAGATGTTGGTTCT
TTGGTAGTTGTGTCTAAATGTGGAGGCAAGTCGCAACAACATTGGAGTCTCAACAAAGAAGACAGAACCATCAACCATCCCAACACCAACTTGGTCATGGATGCCACTTG
GGCTCTCGCCCCTGCCGCCAGTCATTTTCGTTGA
Protein sequenceShow/hide protein sequence
MKDGTIRHDESGLVLPGKSVGRYVKLEVNKDAPSQSWEGTEVFSPTVANIMWLENLCLQSRKAVDWHVSLSECNGKDNNQRWAAFYGDGTIGQNENRNYCLTSSDRDVGS
LVVVSKCGGKSQQHWSLNKEDRTINHPNTNLVMDATWALAPAASHFR