| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-156 | 36.77 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
+SS+ + +LA+DKLNG+N+ + K+ +N VL+ DDLRFVL ++CP P+ +ATRTVR +++ +AN+KA YIL ++S+VL+KKHE M+TA+EIM SLQ
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
MFGQ S +++DALKYIYN+RM EG SVREHVLNMMVHFNVA +N VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK------------------------------KLP--YARLKPQENVSIVVKMGTGRG
+K EANV TS +KF RGS+S TKS P ++K++ G K P A+ K + + + TG+G
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK------------------------------KLP--YARLKPQENVSIVVKMGTGRG
Query: -TSQSPLQ---------------------------------------KRKLRKKNKETSSWRQLADSQI--TLRE-------------------------
++ PL+ K + +K KE + + A S+ T R
Subjt: -TSQSPLQ---------------------------------------KRKLRKKNKETSSWRQLADSQI--TLRE-------------------------
Query: -----KQNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK---------------------------------
+QN V R+ ++ D +RS S SFWGYAV+T YILN V SKSVSETP +LW K
Subjt: -----KQNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK---------------------------------
Query: GYSKETKRGLFYDPQEDKV---------------------------------------------------------------------------------
GY K T+ G FYDP+++KV
Subjt: GYSKETKRGLFYDPQEDKV---------------------------------------------------------------------------------
Query: -------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------
VI D IEDPLT+K M D D+D+WIKAM+LE+ESMYFN VW+LVDQPDG +PI CK
Subjt: -------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------SSQHGIHLSKEQ
+HG+ LSKEQ
Subjt: ----------------------------------------------------------------------------------------SSQHGIHLSKEQ
Query: CLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTSR
C KTPQ+VE+MRHIPYAS VGSLMYAMLCTRPDICY VGIVSR Q DLILTGYT+S FQTD DSRKSTS
Subjt: CLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTSR
Query: LVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDV
VFTLN GA+V RSIKQGCI DSTM+AEYVAACEAAKE WLR FL DLEVVP M+ ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDV
Subjt: LVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDV
Query: IVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
IVTQIAS HN+ DPFTKPLTAKVFEGHLESLGLR
Subjt: IVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| KAA0032972.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-149 | 41.63 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+SS +QLLAS KLNGDN+ KSNLNT+LV D L FVLT+ECP PS +A R R +D+ + N+KA VYIL ++ DVL+KKHE + TAKEIM SL+
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQFRTNSVMNKIEYNLTTLFNELQTFETLMKSKGKKKEANVVTSK-KF
MFGQP S+R++A+KYIY RMKEGTSVREHV++MM+HFN+AEVN IDE +Q NLT KSKGK+ EANV T+K KF
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQFRTNSVMNKIEYNLTTLFNELQTFETLMKSKGKKKEANVVTSK-KF
Query: LRGSSSWTKSGPFFLRILVFRKRRRIMGRKKLPYARLKPQENVSIVVKMGTGRGTSQSP-------------LQKRKLRKKNKETSSWRQLADSQIT---
RGSSS +K+GP + +K + ++ + K I +K+GTG S L K L ++ + QL D+ +
Subjt: LRGSSSWTKSGPFFLRILVFRKRRRIMGRKKLPYARLKPQENVSIVVKMGTGRGTSQSP-------------LQKRKLRKKNKETSSWRQLADSQIT---
Query: ----------------LREKQNL-VRHGSIHDELRSAASSFWGYAVETVAYI-----LNMVHSKSVSETPYELWKW----RKGYSKETKRGLFYDPQEDK
LR K L + H ++ + A + Y + + + ++H+KS S ++ +K GYSKE++ GLFYDPQE+K
Subjt: ----------------LREKQNL-VRHGSIHDELRSAASSFWGYAVETVAYI-----LNMVHSKSVSETPYELWKW----RKGYSKETKRGLFYDPQEDK
Query: V----------------------------------------------------------------------------------VIPDDCIEDPLTYKHVM
V +IPDD IEDPL +K VM
Subjt: V----------------------------------------------------------------------------------VIPDDCIEDPLTYKHVM
Query: NDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------------------------------
ND D DQWIK+MDL+MESMY N VW LVDQP+ R I CK
Subjt: NDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------------------------------
Query: --------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-----------------------------
++GIHLSKEQC KTPQEVEDM +IPYASVV SLMY MLCTRPDI Y VGIVS+ Q
Subjt: --------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-----------------------------
Query: --DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKE
DLILTGYT+S FQ D D+R ST VFTLN GA+V RSIKQ CI DSTM+AEYVA CEA KEV WL+KFL L+ VP M+L I LYCDNSGA+ NS+E
Subjt: --DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKE
Query: PRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
PRSHKRGKHIERKYHLIRE V R DVIVT+I+ + N+ DPFTK LT KVFE HL LGLR
Subjt: PRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| KAA0054309.1 gag/pol protein [Cucumis melo var. makuwa] | 8.0e-162 | 39.42 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+S+ + +LA+DKLNG+N+ + K+ +NTVL+ DDLRFVL +ECP P+ +ATRTVR +++ + N+KA YIL ++S+VL+KKHE M+TA+EIM SLQ
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
MFGQ S +++DALKYI N+RM EG SVREHV+NMMVHFNVAE+NG VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRKK----------------------------------LPYARLKPQENVSI-----VV
+K E NV TS +KF RGS+S TKS P ++K++ G K L + Q ++++ +V
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRKK----------------------------------LPYARLKPQENVSI-----VV
Query: KMG--------------------------TGRG-TSQSPLQ---------------------------------------KRKLRKKNKETSSWRQLADS
K G T +G ++ PL+ K + +K KE + + A S
Subjt: KMG--------------------------TGRG-TSQSPLQ---------------------------------------KRKLRKKNKETSSWRQLADS
Query: QI--TLRE------------------------------KQNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK
+ T R +QN V R+ ++ D +RS S SFWGYAV+T YILN V SKSVSETP +LW RK
Subjt: QI--TLRE------------------------------KQNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK
Query: --------------------GYSKETKRGLFYDPQ----------------------------------------EDKVVIPDDCIEDPLTYKHVMNDTD
Y+ E + +P E VI D IEDPLT+K M D D
Subjt: --------------------GYSKETKRGLFYDPQ----------------------------------------EDKVVIPDDCIEDPLTYKHVMNDTD
Query: RDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK----------------------------------------------------------------
+D+WIKAM+LE+ESMYFN VW+LVDQPDG +PI CK
Subjt: RDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK----------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------SSQHGIHLSKE
+HG+ LSKE
Subjt: -----------------------------------------------------------------------------------------SSQHGIHLSKE
Query: QCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTS
QC KTPQ+VE+MRHIPYAS VGSLMYAMLCTRPDICY VGIVSR Q DLILTGYT+S FQTD DSRKSTS
Subjt: QCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTS
Query: RLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGD
VFTLN GA+V RSIKQGCI DSTM+ EYVAACEAAKEV WLR FL DLEVVP M+ ITLYCDN+G V NS+EPRSHKRGKHIERKYHLIREIV RGD
Subjt: RLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
VIVTQI S HN+ DPFTKPLTAKVFEGHLESLG+R
Subjt: VIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-170 | 40.55 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+S+ + +LA+DKLNG+N+ K+ +NTVL+ DDLRFVL +ECP P+ +AT+TVR +++ +AN+KA YIL ++S+VL+KKHE M+TA+EIM SLQ
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
MFGQ S +++DALKYIYN+RM EG SVREHVLN+MVHFNVAE+NG VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQENVSIVVKMGTGRGTSQSPLQKRKLRKKNKETSSWRQLADSQITL
+K EANV TS +KF RGS+S TKS P ++K++ G K L A+ + + + GT + S + R L + S+ L
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQENVSIVVKMGTGRGTSQSPLQKRKLRKKNKETSSWRQLADSQITL
Query: REKQNLVRHGSIHDELRSAASSFWGYAVETVAYILNMVHSKSVSETPYELWKWRKGYSKETKRGLFYDPQEDKV--------------------------
+SFWGYAV+T YILN V SKSVSETP +LW KGY K T+ G FYDP+++KV
Subjt: REKQNLVRHGSIHDELRSAASSFWGYAVETVAYILNMVHSKSVSETPYELWKWRKGYSKETKRGLFYDPQEDKV--------------------------
Query: --------------------------------------------------------------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYF
VI D IEDPLT+K M D D+D+WIKAM+LE+ESMYF
Subjt: --------------------------------------------------------------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYF
Query: NLVWELVDQPDGGRPIRCK---------------------------------------------------------------------------------
N VW+L+DQPDG +PI CK
Subjt: NLVWELVDQPDGGRPIRCK---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ
+HG+ LSKEQC KTPQ+VE+MRHIPYAS VGSLMYAMLCTRPDICY VGIVSR Q
Subjt: -------------------------------------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ
Query: -------------------------------DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKF
DLILTGYT+S FQTD DSRKST VFTLN GA+V RSIKQGCI DSTM+AEYV ACEAAKE WLR F
Subjt: -------------------------------DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKF
Query: LADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
L DLEVVP M+ ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTQIAS HNI D FTKPLTAKVFEGHLESLGLR
Subjt: LADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| TYJ96755.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-156 | 44.5 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+S+ + +LA+DKLNG+N+ + K+ +NTVL+ DDLRF L +ECP P+ +ATRTVR +++ +AN+KA YIL ++S+
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
S +++DALKYIYN+RM EG S+REHVLNMMVHFN+AE+N VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQ--------------------------ENVSIVVKMGTGR------
+K EANV TS +KF RGS S TKS P+ +K++ G K L A++ + E + +++GTG
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQ--------------------------ENVSIVVKMGTGR------
Query: --GTSQSPLQKRKLRKKNKETSSWRQLADSQIT--------------LREKQNLVRHGSIH---------DELRSAASSFWGYAVETVAYILNMVHSKSV
G + KR K +L S + + + R+G ++ ++ + + ++T ILN V SKSV
Subjt: --GTSQSPLQKRKLRKKNKETSSWRQLADSQIT--------------LREKQNLVRHGSIH---------DELRSAASSFWGYAVETVAYILNMVHSKSV
Query: SETPYELWKWRKGYSKETKRGLFYDPQEDKV-------------------------------------------------------------------VI
SETP +LW RKGY K + G FYDP+++KV VI
Subjt: SETPYELWKWRKGYSKETKRGLFYDPQEDKV-------------------------------------------------------------------VI
Query: PDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCKSS---------------------------------------QHGI
D IEDPLT+K + D D+D+WIKAM+LE+ESMYFN VW+LVDQ DG +PI CK S HG+
Subjt: PDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCKSS---------------------------------------QHGI
Query: HLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTM
LSKEQC KTPQ+VE+MRHIPYAS VGSLM TR D V G +DLILT Y +S FQTD DSRKSTS VFTLN GA+V RSIKQGCI DSTM
Subjt: HLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTM
Query: DAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFE
+AEY+AACEAAKE WLRKFL DLEVVP M ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREI RGDVIVTQIA HN+ DPFTKPLTAKVFE
Subjt: DAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFE
Query: GHLESLGLR
GHL SLGLR
Subjt: GHLESLGLR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNP8 Gag/pol protein | 6.4e-157 | 36.77 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
+SS+ + +LA+DKLNG+N+ + K+ +N VL+ DDLRFVL ++CP P+ +ATRTVR +++ +AN+KA YIL ++S+VL+KKHE M+TA+EIM SLQ
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
MFGQ S +++DALKYIYN+RM EG SVREHVLNMMVHFNVA +N VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK------------------------------KLP--YARLKPQENVSIVVKMGTGRG
+K EANV TS +KF RGS+S TKS P ++K++ G K P A+ K + + + TG+G
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK------------------------------KLP--YARLKPQENVSIVVKMGTGRG
Query: -TSQSPLQ---------------------------------------KRKLRKKNKETSSWRQLADSQI--TLRE-------------------------
++ PL+ K + +K KE + + A S+ T R
Subjt: -TSQSPLQ---------------------------------------KRKLRKKNKETSSWRQLADSQI--TLRE-------------------------
Query: -----KQNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK---------------------------------
+QN V R+ ++ D +RS S SFWGYAV+T YILN V SKSVSETP +LW K
Subjt: -----KQNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK---------------------------------
Query: GYSKETKRGLFYDPQEDKV---------------------------------------------------------------------------------
GY K T+ G FYDP+++KV
Subjt: GYSKETKRGLFYDPQEDKV---------------------------------------------------------------------------------
Query: -------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------
VI D IEDPLT+K M D D+D+WIKAM+LE+ESMYFN VW+LVDQPDG +PI CK
Subjt: -------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------SSQHGIHLSKEQ
+HG+ LSKEQ
Subjt: ----------------------------------------------------------------------------------------SSQHGIHLSKEQ
Query: CLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTSR
C KTPQ+VE+MRHIPYAS VGSLMYAMLCTRPDICY VGIVSR Q DLILTGYT+S FQTD DSRKSTS
Subjt: CLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTSR
Query: LVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDV
VFTLN GA+V RSIKQGCI DSTM+AEYVAACEAAKE WLR FL DLEVVP M+ ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDV
Subjt: LVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDV
Query: IVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
IVTQIAS HN+ DPFTKPLTAKVFEGHLESLGLR
Subjt: IVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| A0A5A7UYX7 Gag/pol protein | 1.3e-146 | 38.09 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+++ + +LA+DKLNG+N+ + K+ +N VL+ DDL+FVL +ECP P+ +AT+TVR +++ + N+K YIL ++S+VL+KKHE M+TA+EIM SLQ
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQFRTNSVMNKIEYNLTTLFNELQTFET-----LMKSKGKKK------
MFGQ S + +DALKYIYN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQ + K E N+ T + T + S G KK
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQFRTNSVMNKIEYNLTTLFNELQTFET-----LMKSKGKKK------
Query: ----EANVVTSKKFLRGSSS------------WTKSGPFFLRILVFRKRRRI-MGR--KKLPYARLKPQENVSIVV-----------KMGTGRG-TSQSP
+AN+ +K + ++ W ++ P +L K+ I + R + + L E S+ + + TG+G ++ P
Subjt: ----EANVVTSKKFLRGSSS------------WTKSGPFFLRILVFRKRRRI-MGR--KKLPYARLKPQENVSIVV-----------KMGTGRG-TSQSP
Query: LQ---------------------------------------KRKLRKKNKETSSWRQLADSQI--TLRE------------------------------K
L+ K + +K KE + + A S+ T R +
Subjt: LQ---------------------------------------KRKLRKKNKETSSWRQLADSQI--TLRE------------------------------K
Query: QNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK---------------------------------GYSKET
QN V R+ ++ D +RS S SFWGYAV+T YILN V SKSV ETP +LW RK GY K T
Subjt: QNLV---RHGSIHDELRSAAS------SFWGYAVETVAYILNMVHSKSVSETPYELWKWRK---------------------------------GYSKET
Query: KRGLFYDPQEDKV---------------------------------------------------------------------------------------
+ G FYD +++KV
Subjt: KRGLFYDPQEDKV---------------------------------------------------------------------------------------
Query: -VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------------
VI D IEDPLT+K M D D+D+WIKAM+LE+ESMYFN VW+LVDQPDG +PI CK
Subjt: -VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------------
Query: ---------------------------------------------------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTR
+H + LSKEQC KTPQ+VE+MRHIPYASVVGSLMY MLC R
Subjt: ---------------------------------------------------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTR
Query: PDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVA
PDICY VGIVSR Q DLILT YT+S FQTD DSRKS VFTLN GA+V RSIKQGCI DSTM+AEYVA
Subjt: PDICYVVGIVSRIQ-------------------------------DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVA
Query: ACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESL
ACE AKE WLRKFL DLEVVP M+ ITLYCDNSGAV NS+EPRSHKRGKHI+RKYHLIREIVQRGDVIVTQIAS HN+ DPFTKPLTAKVFEGHLESL
Subjt: ACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESL
Query: GLR
GLR
Subjt: GLR
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| A0A5A7V6N0 Gag/pol protein | 1.0e-170 | 40.55 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+S+ + +LA+DKLNG+N+ K+ +NTVL+ DDLRFVL +ECP P+ +AT+TVR +++ +AN+KA YIL ++S+VL+KKHE M+TA+EIM SLQ
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
MFGQ S +++DALKYIYN+RM EG SVREHVLN+MVHFNVAE+NG VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQENVSIVVKMGTGRGTSQSPLQKRKLRKKNKETSSWRQLADSQITL
+K EANV TS +KF RGS+S TKS P ++K++ G K L A+ + + + GT + S + R L + S+ L
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQENVSIVVKMGTGRGTSQSPLQKRKLRKKNKETSSWRQLADSQITL
Query: REKQNLVRHGSIHDELRSAASSFWGYAVETVAYILNMVHSKSVSETPYELWKWRKGYSKETKRGLFYDPQEDKV--------------------------
+SFWGYAV+T YILN V SKSVSETP +LW KGY K T+ G FYDP+++KV
Subjt: REKQNLVRHGSIHDELRSAASSFWGYAVETVAYILNMVHSKSVSETPYELWKWRKGYSKETKRGLFYDPQEDKV--------------------------
Query: --------------------------------------------------------------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYF
VI D IEDPLT+K M D D+D+WIKAM+LE+ESMYF
Subjt: --------------------------------------------------------------VIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYF
Query: NLVWELVDQPDGGRPIRCK---------------------------------------------------------------------------------
N VW+L+DQPDG +PI CK
Subjt: NLVWELVDQPDGGRPIRCK---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ
+HG+ LSKEQC KTPQ+VE+MRHIPYAS VGSLMYAMLCTRPDICY VGIVSR Q
Subjt: -------------------------------------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ
Query: -------------------------------DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKF
DLILTGYT+S FQTD DSRKST VFTLN GA+V RSIKQGCI DSTM+AEYV ACEAAKE WLR F
Subjt: -------------------------------DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKF
Query: LADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
L DLEVVP M+ ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTQIAS HNI D FTKPLTAKVFEGHLESLGLR
Subjt: LADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| A0A5D3BE74 Gag/pol protein | 1.9e-156 | 44.5 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+S+ + +LA+DKLNG+N+ + K+ +NTVL+ DDLRF L +ECP P+ +ATRTVR +++ +AN+KA YIL ++S+
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
S +++DALKYIYN+RM EG S+REHVLNMMVHFN+AE+N VIDE S QFR+N+VMNKI Y LTTL NELQTFE+LMK KG
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENS--------------QFRTNSVMNKIEYNLTTLFNELQTFETLMKSKG
Query: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQ--------------------------ENVSIVVKMGTGR------
+K EANV TS +KF RGS S TKS P+ +K++ G K L A++ + E + +++GTG
Subjt: KKKEANVVTS-KKFLRGSSSWTKSGPFFLRILVFRKRRRIMGRK-KLPYARLKPQ--------------------------ENVSIVVKMGTGR------
Query: --GTSQSPLQKRKLRKKNKETSSWRQLADSQIT--------------LREKQNLVRHGSIH---------DELRSAASSFWGYAVETVAYILNMVHSKSV
G + KR K +L S + + + R+G ++ ++ + + ++T ILN V SKSV
Subjt: --GTSQSPLQKRKLRKKNKETSSWRQLADSQIT--------------LREKQNLVRHGSIH---------DELRSAASSFWGYAVETVAYILNMVHSKSV
Query: SETPYELWKWRKGYSKETKRGLFYDPQEDKV-------------------------------------------------------------------VI
SETP +LW RKGY K + G FYDP+++KV VI
Subjt: SETPYELWKWRKGYSKETKRGLFYDPQEDKV-------------------------------------------------------------------VI
Query: PDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCKSS---------------------------------------QHGI
D IEDPLT+K + D D+D+WIKAM+LE+ESMYFN VW+LVDQ DG +PI CK S HG+
Subjt: PDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCKSS---------------------------------------QHGI
Query: HLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTM
LSKEQC KTPQ+VE+MRHIPYAS VGSLM TR D V G +DLILT Y +S FQTD DSRKSTS VFTLN GA+V RSIKQGCI DSTM
Subjt: HLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTM
Query: DAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFE
+AEY+AACEAAKE WLRKFL DLEVVP M ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREI RGDVIVTQIA HN+ DPFTKPLTAKVFE
Subjt: DAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFE
Query: GHLESLGLR
GHL SLGLR
Subjt: GHLESLGLR
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| A0A5D3DE90 Gag/pol protein | 1.7e-149 | 41.63 | Show/hide |
Query: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
M+SS +QLLAS KLNGDN+ KSNLNT+LV D L FVLT+ECP PS +A R R +D+ + N+KA VYIL ++ DVL+KKHE + TAKEIM SL+
Subjt: MSSSFIQLLASDKLNGDNFRTLKSNLNTVLVTDDLRFVLTKECPPPPSLSATRTVRYTFDKLTRANDKAPVYILVNISDVLSKKHEGMITAKEIMGSLQA
Query: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQFRTNSVMNKIEYNLTTLFNELQTFETLMKSKGKKKEANVVTSK-KF
MFGQP S+R++A+KYIY RMKEGTSVREHV++MM+HFN+AEVN IDE +Q NLT KSKGK+ EANV T+K KF
Subjt: MFGQPSSSVRYDALKYIYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQFRTNSVMNKIEYNLTTLFNELQTFETLMKSKGKKKEANVVTSK-KF
Query: LRGSSSWTKSGPFFLRILVFRKRRRIMGRKKLPYARLKPQENVSIVVKMGTGRGTSQSP-------------LQKRKLRKKNKETSSWRQLADSQIT---
RGSSS +K+GP + +K + ++ + K I +K+GTG S L K L ++ + QL D+ +
Subjt: LRGSSSWTKSGPFFLRILVFRKRRRIMGRKKLPYARLKPQENVSIVVKMGTGRGTSQSP-------------LQKRKLRKKNKETSSWRQLADSQIT---
Query: ----------------LREKQNL-VRHGSIHDELRSAASSFWGYAVETVAYI-----LNMVHSKSVSETPYELWKW----RKGYSKETKRGLFYDPQEDK
LR K L + H ++ + A + Y + + + ++H+KS S ++ +K GYSKE++ GLFYDPQE+K
Subjt: ----------------LREKQNL-VRHGSIHDELRSAASSFWGYAVETVAYI-----LNMVHSKSVSETPYELWKW----RKGYSKETKRGLFYDPQEDK
Query: V----------------------------------------------------------------------------------VIPDDCIEDPLTYKHVM
V +IPDD IEDPL +K VM
Subjt: V----------------------------------------------------------------------------------VIPDDCIEDPLTYKHVM
Query: NDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------------------------------
ND D DQWIK+MDL+MESMY N VW LVDQP+ R I CK
Subjt: NDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK------------------------------------------------------------
Query: --------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-----------------------------
++GIHLSKEQC KTPQEVEDM +IPYASVV SLMY MLCTRPDI Y VGIVS+ Q
Subjt: --------------SSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIVSRIQ-----------------------------
Query: --DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKE
DLILTGYT+S FQ D D+R ST VFTLN GA+V RSIKQ CI DSTM+AEYVA CEA KEV WL+KFL L+ VP M+L I LYCDNSGA+ NS+E
Subjt: --DLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKE
Query: PRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
PRSHKRGKHIERKYHLIRE V R DVIVT+I+ + N+ DPFTK LT KVFE HL LGLR
Subjt: PRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGLR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.6e-22 | 32.29 | Show/hide |
Query: PYASVVGSLMYAMLCTRPDICYVVGIVSRIQD------------------------LI----------LTGYTNSSFQTDVDSRKSTSRLVFTLNE-GAI
P S++G LMY MLCTRPD+ V I+SR LI + GY +S + RKST+ +F + + I
Subjt: PYASVVGSLMYAMLCTRPDICYVVGIVSRIQD------------------------LI----------LTGYTNSSFQTDVDSRKSTSRLVFTLNE-GAI
Query: VRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHN
+ +Q + S+ +AEY+A EA +E WL+ L + + K+ I +Y DN G ++ + P HKR KHI+ KYH RE VQ + + I +++
Subjt: VRRSIKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHN
Query: IDDPFTKPLTAKVFEGHLESLGL
+ D FTKPL A F + LGL
Subjt: IDDPFTKPLTAKVFEGHLESLGL
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| P0CV72 Secreted RxLR effector protein 161 | 1.6e-11 | 33.08 | Show/hide |
Query: MRHIPYASVVGSLMYAMLCTRPDICYVVGIVS--------------------------------RIQDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGA
M+++PY S VG++MY M+ TRPD+ VG++S R L GY+++ + DV+SR+STS +F LN G
Subjt: MRHIPYASVVGSLMYAMLCTRPDICYVVGIVS--------------------------------RIQDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGA
Query: IVRRSIKQGCITDSTMDAEYVAACEAAKEVEWL
+ RS KQ + S+ + EY+A EA +E WL
Subjt: IVRRSIKQGCITDSTMDAEYVAACEAAKEVEWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.8e-38 | 34.93 | Show/hide |
Query: LTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCKSSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIV
L K V T R W+ + Y V E + + +P+ + H + LSK+ C T +E +M +PY+S VGSLMYAM+CTRPDI + VG+V
Subjt: LTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCKSSQHGIHLSKEQCLKTPQEVEDMRHIPYASVVGSLMYAMLCTRPDICYVVGIV
Query: SRI-------------------------------QDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEW
SR D IL GYT++ D+D+RKS++ +FT + GAI +S Q C+ ST +AEY+AA E KE+ W
Subjt: SRI-------------------------------QDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRSIKQGCITDSTMDAEYVAACEAAKEVEW
Query: LRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGL
L++FL +L + K +YCD+ A+ SK H R KHI+ +YH IRE+V + V +I++ N D TK + FE E +G+
Subjt: LRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDPFTKPLTAKVFEGHLESLGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-05 | 39.68 | Show/hide |
Query: PQEDKVVIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK
P + V+I DD +P + K V++ +++Q +KAM EMES+ N ++LV+ P G RP++CK
Subjt: PQEDKVVIPDDCIEDPLTYKHVMNDTDRDQWIKAMDLEMESMYFNLVWELVDQPDGGRPIRCK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.2e-16 | 27.85 | Show/hide |
Query: YASVVGSLMYAMLCTRPDICYVVGIVSRI--------------------------------QDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRS
Y +VGSL Y + TRPDI Y V +S+ L L Y+++ + D D ST+ + L I S
Subjt: YASVVGSLMYAMLCTRPDICYVVGIVSRI--------------------------------QDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRS
Query: IKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDP
KQ + S+ +AEY + + E++W+ L +L + ++ +YCDN GA P H R KHI YH IR VQ G + V +++ + D
Subjt: IKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDP
Query: FTKPLTAKVFEGHLESLGL
TKPL+ F+ +G+
Subjt: FTKPLTAKVFEGHLESLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-15 | 27.4 | Show/hide |
Query: YASVVGSLMYAMLCTRPDICYVVGIVSRI--------------------------------QDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRS
Y +VGSL Y + TRPD+ Y V +S+ L L Y+++ + D D ST+ + L I S
Subjt: YASVVGSLMYAMLCTRPDICYVVGIVSRI--------------------------------QDLILTGYTNSSFQTDVDSRKSTSRLVFTLNEGAIVRRS
Query: IKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDP
KQ + S+ +AEY + + E++W+ L +L + +++ +YCDN GA P H R KHI YH IR VQ G + V +++ + D
Subjt: IKQGCITDSTMDAEYVAACEAAKEVEWLRKFLADLEVVPKMNLHITLYCDNSGAVTNSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASKHNIDDP
Query: FTKPLTAKVFEGHLESLGL
TKPL+ F+ +G+
Subjt: FTKPLTAKVFEGHLESLGL
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