; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007753 (gene) of Snake gourd v1 genome

Gene IDTan0007753
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-directed RNA polymerase V subunit 7
Genome locationLG06:76962570..76964845
RNA-Seq ExpressionTan0007753
SyntenyTan0007753
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150402.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]4.1e-9298.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_008465191.1 PREDICTED: DNA-directed RNA polymerase V subunit 7 [Cucumis melo]8.3e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_022138329.1 DNA-directed RNA polymerase V subunit 7 [Momordica charantia]1.2e-9197.14Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIP+ENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVF+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_022958784.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata]1.2e-9197.14Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_023006755.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima]1.6e-9197.14Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ1 Uncharacterized protein2.0e-9298.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A1S3CNB4 DNA-directed RNA polymerase V subunit 74.0e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A5D3CAJ0 DNA-directed RNA polymerase V subunit 74.0e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1C9U9 DNA-directed RNA polymerase V subunit 75.8e-9297.14Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIP+ENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVF+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1H315 DNA-directed RNA polymerase V subunit 75.8e-9297.14Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIII LLDEFATKKATKDLGYFLAVTTLE+IGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 71.5e-7672.16Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG
        MFLKVQLPWNV+IPAEN+DAKGLML+R+I++ LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV FSG+TFK+++GEI+ GVVHKVLKHG
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+F+N+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

P38421 DNA-directed RNA polymerase II subunit 74.7e-1431.95Show/hide
Query:  LMLQRSIIIH------LLDEFATKKATKDL--------GYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPV
        ++L+R++ +H       L E    K  KD+        G+ +A+T +++IG+G +R  TG V FPV +  + F+ ++GEILE VV  V K G F   GPV
Subjt:  LMLQRSIIIH------LLDEFATKKATKDL--------GYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPV

Query:  ENIYLSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        +     +L   D  +  G+ P +  +D   KI+K+  VR  +IGT+ ++A   F  + +++ D+LG ++
Subjt:  ENIYLSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

P46279 DNA-directed RNA polymerase II subunit RPB75.5e-1537.4Show/hide
Query:  GYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVV
        G+ +AVT +E+IG+G +R  TG V FPV +  + F+ ++GEILE VV  V K G F   GPV+    ++L   D  +  G+ P +  +D   KI+KD  V
Subjt:  GYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVV

Query:  RFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        R  +IGT+ ++A   F  + +++ D+LG ++
Subjt:  RFIVIGTKWLEAEREFQALVSLEGDYLGPVS

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein3.8e-2438.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L+SIG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

Q8LE42 DNA-directed RNA polymerase IV subunit 74.5e-5759.2Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVR-QTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG
        MF+KV+LPW+V IPAE++D  GLMLQR+I+I LL+ F+ +KATKDLGY +  T LE+IGEGK++ QTG++ FPV F+GI FK+++GEI+ GVVHKV K G
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVR-QTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP F+N  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain3.2e-5859.2Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVR-QTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG
        MF+KV+LPW+V IPAE++D  GLMLQR+I+I LL+ F+ +KATKDLGY +  T LE+IGEGK++ QTG++ FPV F+GI FK+++GEI+ GVVHKV K G
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVR-QTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP F+N  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

AT4G14520.1 DNA-directed RNA polymerase II-related2.7e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L+SIG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14520.2 DNA-directed RNA polymerase II-related2.7e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L+SIG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14520.3 DNA-directed RNA polymerase II-related2.7e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L+SIG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGK--------VRQTGDVLFPVTFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.0e-7772.16Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG
        MFLKVQLPWNV+IPAEN+DAKGLML+R+I++ LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV FSG+TFK+++GEI+ GVVHKVLKHG
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQ-TGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+F+N+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCAAAGTGCAATTGCCCTGGAATGTCATCATTCCTGCTGAAAACTTGGACGCAAAGGGCTTGATGCTCCAAAGGTCTATTATAATTCATCTATTAGATGAATT
TGCCACAAAAAAGGCCACCAAGGATCTCGGCTATTTCCTCGCAGTTACGACACTGGAAAGTATAGGGGAAGGGAAAGTTCGACAAACGGGCGATGTCTTGTTTCCTGTTA
CTTTTAGCGGCATCACCTTCAAGCTTTATAGGGGAGAGATCTTGGAGGGGGTTGTTCACAAGGTACTCAAACATGGTGTTTTCTTGAGATGTGGACCTGTTGAGAACATA
TATCTATCTTATCTAAAAATGCCAGATTACCGCTACGTGCCGGGTGAAAATCCCGTCTTCTTGAATGACAAGCTCTCAAAAATTGAGAAGGATGTAGTAGTTCGTTTTAT
TGTCATCGGAACGAAGTGGCTCGAGGCAGAAAGGGAATTTCAGGCACTGGTAAGTTTGGAGGGTGATTATCTAGGGCCTGTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCGGAAAGGGCAAGTTTCTTCTTCTTCTTCTTTTTCAGATTTCTGATAGGTTGAAGAAGTAGGAAAAATGTTTCTCAAAGTGCAATTGCCCTGGAATGTCATCATTCCTG
CTGAAAACTTGGACGCAAAGGGCTTGATGCTCCAAAGGTCTATTATAATTCATCTATTAGATGAATTTGCCACAAAAAAGGCCACCAAGGATCTCGGCTATTTCCTCGCA
GTTACGACACTGGAAAGTATAGGGGAAGGGAAAGTTCGACAAACGGGCGATGTCTTGTTTCCTGTTACTTTTAGCGGCATCACCTTCAAGCTTTATAGGGGAGAGATCTT
GGAGGGGGTTGTTCACAAGGTACTCAAACATGGTGTTTTCTTGAGATGTGGACCTGTTGAGAACATATATCTATCTTATCTAAAAATGCCAGATTACCGCTACGTGCCGG
GTGAAAATCCCGTCTTCTTGAATGACAAGCTCTCAAAAATTGAGAAGGATGTAGTAGTTCGTTTTATTGTCATCGGAACGAAGTGGCTCGAGGCAGAAAGGGAATTTCAG
GCACTGGTAAGTTTGGAGGGTGATTATCTAGGGCCTGTTTCTTAATGAATTTCAGGCACTGGTAAGTTTGTAGTCTGTATCTAAGTACATGTCTTGATAACATTCTGACT
CTTTTTGATGTAATTAACCTTGTTAGATGTTGGAAGTTAAATTTCATGCGAAGGACAGTTATGAATCATGTTAGAGTTTCAAGTGTCAATCATACTGATTCATTAGCATG
CATTCTATGGTATATTAGAAAAACCAAATCATATTGTCTTCAGGGGATGAACAATATGTATAGATGACATTACTAATTGAAGCTAAATGTTTGTAGGAAGTTTCTTGGAC
AGTAGGC
Protein sequenceShow/hide protein sequence
MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIHLLDEFATKKATKDLGYFLAVTTLESIGEGKVRQTGDVLFPVTFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENI
YLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS