; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007759 (gene) of Snake gourd v1 genome

Gene IDTan0007759
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA exonuclease 4
Genome locationLG11:5445849..5449225
RNA-Seq ExpressionTan0007759
SyntenyTan0007759
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013087 - Zinc finger C2H2-type
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578645.1 hypothetical protein SDJN03_23093, partial [Cucurbita argyrosperma subsp. sororia]8.6e-16588.29Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRDGST +D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKPIIPVTNYRYE TGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQML
        IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IRFEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPMASDPQNKNNFA WRENEL+RMSPEQML
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQML

Query:  DISRSDYYCWCIDSMI
        +ISRSDYYCWC+D  I
Subjt:  DISRSDYYCWCIDSMI

XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]5.8e-16180.47Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HSLETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC ICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAI DSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLARFANLGIRDGST++D GRTRGSGA+ALACKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKP+  VTNYRYETTGIRPE  R+AM +KQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM
        IQ+ILYNGGEKAR+LVG CVEDDLKRLQIGYPS  IR                           F++Q GIQDPYE+C+ AMR+YKRMRS+VHR EN+PM
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM

Query:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        ASDPQNKNNFA+WRENELQRMSPEQML+ISRSDYYCWC+D  I
Subjt:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

XP_022134351.1 RNA exonuclease 4 isoform X1 [Momordica charantia]1.7e-15779.77Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +H LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEP C ICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFSGV
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRD S +VD GR R +G VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSYVKPIIPVTNYR+ETTGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS
        IQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP                          V + F+IQ GIQDPYEDCVA+MR+YKRMRS+VH+IE++PMAS
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS

Query:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        DPQNKNNF +WR+NEL+RM+PE MLDISRSDYYCWC+D  I
Subjt:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

XP_022938612.1 RNA exonuclease 4-like [Cucurbita moschata]8.4e-16081.05Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRDGST +D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKPIIPVTNYRYE TGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM
        IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR                           FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM

Query:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Subjt:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

XP_022993635.1 RNA exonuclease 4-like [Cucurbita maxima]8.4e-16081.05Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRDGST +D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKP IPVTNYRYETTGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM
        IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR                           FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM

Query:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Subjt:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 46.1e-14069.49Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HSLETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC ICKKHCRSLDSLREHLIGPLPKQEC+NIFATRGCKFCLAILDSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLARFANLGIRDGSTI+D GRTRGSGA+ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TG+RPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGE----------KARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQ-DPYEDCVAAMRVYKRMR
        IQ+ L NG +          KAR+LVGH +++ L  LQI YPS+ IR                           + ++ G + + YE+CVA MR+Y +M+
Subjt:  IQDILYNGGE----------KARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQ-DPYEDCVAAMRVYKRMR

Query:  SEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        S+VH+ E +P+ASDP NK NFA+W++ EL++M+P+Q+L ISRSDYYCWC+D+ +
Subjt:  SEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

A0A6J1BXL4 RNA exonuclease 48.5e-15879.77Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +H LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEP C ICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFSGV
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRD S +VD GR R +G VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSYVKPIIPVTNYR+ETTGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS
        IQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP                          V + F+IQ GIQDPYEDCVA+MR+YKRMRS+VH+IE++PMAS
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS

Query:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        DPQNKNNF +WR+NEL+RM+PE MLDISRSDYYCWC+D  I
Subjt:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

A0A6J1BZE0 RNA exonuclease 43.6e-15679.07Show/hide
Query:  NHSLETS---RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQF
        +H LETS   RHKCAACFRQFNKIEHLVDHMRTSFHSVHEP C ICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQF
Subjt:  NHSLETS---RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQF

Query:  SGVNSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQV
        SGVNSGLLAR ANLGIRD S +VD GR R +G VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSYVKPIIPVTNYR+ETTGIRPE  R+AM LKQV
Subjt:  SGVNSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQV

Query:  QKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHP
        QKKIQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP                          V + F+IQ GIQDPYEDCVA+MR+YKRMRS+VH+IE++P
Subjt:  QKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHP

Query:  MASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        MASDPQNKNNF +WR+NEL+RM+PE MLDISRSDYYCWC+D  I
Subjt:  MASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

A0A6J1FEK0 RNA exonuclease 44.1e-16081.05Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRDGST +D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKPIIPVTNYRYE TGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM
        IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR                           FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM

Query:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Subjt:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

A0A6J1JZ30 RNA exonuclease 44.1e-16081.05Show/hide
Query:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV
        +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS V
Subjt:  NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGV

Query:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK
        NSGLLAR ANLGIRDGST +D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKP IPVTNYRYETTGIRPE  R+AM LKQVQKK
Subjt:  NSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKK

Query:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM
        IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR                           FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Subjt:  IQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM

Query:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI
        ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Subjt:  ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 44.2e-1327.06Show/hide
Query:  VALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIG
        +A+ C++VG G +G     A++ +++   +V+   +VKP   V  +R   +GI+PE  + A+  K+ QKK  DIL     + R+LVGH ++ DL+ L + 
Subjt:  VALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIG

Query:  YPSVAIR-----------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENH
        +P   +R                               IQ+G     ED  A M +YK+ ++E  +I  +
Subjt:  YPSVAIR-----------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENH

Q6CMT3 RNA exonuclease 45.5e-1329.38Show/hide
Query:  RTRGSGA-VALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVED
        RT G G  V++ C++VG G DG     A+V +++   NV+   +V+P  PVT++R   +GI+P     A+  +  QK++ ++L     K R+LVGH V  
Subjt:  RTRGSGA-VALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVED

Query:  DLKRLQIGYPSVAIR-----------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIEN
        DL  L + +P   IR                              +IQ G     ED  A M +YK  + E  ++ N
Subjt:  DLKRLQIGYPSVAIR-----------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIEN

Q6PAQ4 RNA exonuclease 45.0e-1434.04Show/hide
Query:  GVNSGLLARFANLGIRDGSTIVDKGRTRG--SGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQ
        G  + +L R   LG +  +  ++K +  G  + A+AL C+ VG G  G   I A+V ++++    ++  YVKP  PVT+YR   +GIRPE  ++    + 
Subjt:  GVNSGLLARFANLGIRDGSTIVDKGRTRG--SGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQ

Query:  VQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR
        V+K++ ++L     K R+LVGH + +DLK L + +P   IR
Subjt:  VQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR

Q91560 RNA exonuclease 46.5e-1440.52Show/hide
Query:  KGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVE
        +G TR    VA+ C+ VG G DG   I A+V +++     ++  YVKP   VT+YR   +GIRPE  ++    K VQK++ +IL     + R LVGH V 
Subjt:  KGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVE

Query:  DDLKRLQIGYPSVAIR
        +DLK L + +P  AIR
Subjt:  DDLKRLQIGYPSVAIR

Q9GZR2 RNA exonuclease 42.0e-1534.12Show/hide
Query:  GVNSGLLARFANLGIRDGSTIVDKGRTRGSG----AVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMML
        G  +  +AR   LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V ++++    ++  YVKP  PVT+YR   +GIRPE  ++   L
Subjt:  GVNSGLLARFANLGIRDGSTIVDKGRTRGSG----AVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMML

Query:  KQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSE
        + VQK++ ++L     K R+LVGH + +DLK L + +P   IR + QK    P++  V + R   R+ SE
Subjt:  KQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSE

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein4.9e-6537.06Show/hide
Query:  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLL
        RH+C AC++ FN+ EHLV+HM+ S+HS+H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + +++   H+ +C  S       
Subjt:  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLL

Query:  ARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDIL
                R+ S+ +   R +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P++PVT+YR+E TG+  E  ++ M L+ V++++   L
Subjt:  ARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDIL

Query:  ---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS
            N G    +LVGH +  D+  L++ YPS  +R                           ++IQ G  + YEDCV+AMR+YKRMR + H      + S
Subjt:  ---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS

Query:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM
             N     ++++L++M+ E++   S S+Y CWC+D +
Subjt:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM

AT2G48100.2 Exonuclease family protein4.9e-6537.06Show/hide
Query:  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLL
        RH+C AC++ FN+ EHLV+HM+ S+HS+H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + +++   H+ +C  S       
Subjt:  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLL

Query:  ARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDIL
                R+ S+ +   R +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P++PVT+YR+E TG+  E  ++ M L+ V++++   L
Subjt:  ARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDIL

Query:  ---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS
            N G    +LVGH +  D+  L++ YPS  +R                           ++IQ G  + YEDCV+AMR+YKRMR + H      + S
Subjt:  ---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS

Query:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM
             N     ++++L++M+ E++   S S+Y CWC+D +
Subjt:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM

AT2G48100.3 Exonuclease family protein4.9e-6537.06Show/hide
Query:  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLL
        RH+C AC++ FN+ EHLV+HM+ S+HS+H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + +++   H+ +C  S       
Subjt:  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLL

Query:  ARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDIL
                R+ S+ +   R +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P++PVT+YR+E TG+  E  ++ M L+ V++++   L
Subjt:  ARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDIL

Query:  ---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS
            N G    +LVGH +  D+  L++ YPS  +R                           ++IQ G  + YEDCV+AMR+YKRMR + H      + S
Subjt:  ---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS

Query:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM
             N     ++++L++M+ E++   S S+Y CWC+D +
Subjt:  DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM

AT3G27970.1 Exonuclease family protein3.7e-12159.03Show/hide
Query:  SLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNS
        S ET R+KCAAC+RQFNK+EHLV+HM+ S+HS HEPTC +CKKHCRS +SLREHLIGPLPKQECKNIF+ RGC+FC+ IL+S  S+R+HQERCQFS VNS
Subjt:  SLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNS

Query:  GLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQ
        GL  R A LG+RD   ++D   +R    VAL+CK VGGG DGSLD+CA+VC+ DES+NVIF++YVKP + VT+YRYETTGIRPE  R+AM LKQVQ+KIQ
Subjt:  GLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQ

Query:  DILYNG---------GEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVH
        + L NG         G KAR+LVGH ++ DL RLQ+ YPS  IR                           +++  GIQDPYEDCVA MR+Y RMR + H
Subjt:  DILYNG---------GEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVH

Query:  RIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM
        +IE +P+A+D QN++N   WR++E +RMSP++ML ISRSDYYCWC+DS+
Subjt:  RIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM

AT5G40310.1 Exonuclease family protein8.2e-12159.48Show/hide
Query:  LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSG
        ++T R+KC  C+RQFNK EHLV+HMR S+HSVHEPTC IC KHCRS DSLREHLIGPLPKQECKNIF+ RGC+FCL IL+S  ++R+HQERCQ S V SG
Subjt:  LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSG

Query:  LLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQD
        L+ R A LG+R+ STI D   +R    VAL+CK VGGG DGSLD+CA+VC+ DESENV+F++YVKP IPVTNYRYE TGIRPE  R+AM LK  Q+K+Q+
Subjt:  LLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQD

Query:  ILYNG---------GEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHR
         L NG           KAR+LVGH +++ L  LQ+ Y S  IR                           ++I  GIQDPYEDCVA MR+Y RMR + HR
Subjt:  ILYNG---------GEKARVLVGHCVEDDLKRLQIGYPSVAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHR

Query:  IENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM
         E +P+ASD QN NNFA WR+NEL+RMSPE++LD+SRSDYYCWC+DS+
Subjt:  IENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATCATTCACTTGAGACTTCGAGGCATAAATGTGCAGCTTGCTTTAGGCAATTCAACAAGATAGAGCACTTGGTTGATCATATGAGGACCTCTTTTCACTCAGT
TCATGAACCCACTTGTAACATTTGCAAGAAACACTGTAGATCTCTTGATTCTCTTAGAGAACATCTTATTGGGCCACTCCCAAAGCAAGAATGCAAAAACATTTTTGCGA
CAAGAGGATGCAAGTTTTGTTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTTCATCAAGAAAGATGCCAATTCTCTGGTGTAAATTCTGGGCTTCTTGCTCGTTTC
GCCAACTTGGGAATTCGTGATGGTTCGACCATCGTCGACAAGGGAAGAACTCGAGGCTCCGGCGCGGTGGCATTAGCTTGCAAATATGTAGGTGGCGGCGGCGATGGGTC
GCTGGACATCTGCGCCAAGGTCTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCAATAATTCCTGTTACAAATTATAGGTATGAAACGACGG
GTATTCGTCCAGAACAGTTTAGGGAGGCAATGATGCTGAAACAAGTTCAAAAGAAAATTCAAGATATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCAC
TGTGTAGAAGACGATCTCAAACGCCTACAAATTGGATATCCATCCGTCGCGATAAGATTTGAGATTCAAAAAGGGATACAAGATCCTTATGAAGATTGTGTTGCAGCCAT
GAGAGTATACAAAAGAATGAGATCAGAAGTTCATAGGATAGAGAACCATCCAATGGCTTCAGATCCACAAAACAAAAATAACTTTGCAGTTTGGAGGGAAAATGAGCTTC
AGAGAATGAGCCCAGAACAGATGTTGGACATTTCAAGGTCTGATTATTATTGTTGGTGCATCGACTCCATGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATCATTCACTTGAGACTTCGAGGCATAAATGTGCAGCTTGCTTTAGGCAATTCAACAAGATAGAGCACTTGGTTGATCATATGAGGACCTCTTTTCACTCAGT
TCATGAACCCACTTGTAACATTTGCAAGAAACACTGTAGATCTCTTGATTCTCTTAGAGAACATCTTATTGGGCCACTCCCAAAGCAAGAATGCAAAAACATTTTTGCGA
CAAGAGGATGCAAGTTTTGTTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTTCATCAAGAAAGATGCCAATTCTCTGGTGTAAATTCTGGGCTTCTTGCTCGTTTC
GCCAACTTGGGAATTCGTGATGGTTCGACCATCGTCGACAAGGGAAGAACTCGAGGCTCCGGCGCGGTGGCATTAGCTTGCAAATATGTAGGTGGCGGCGGCGATGGGTC
GCTGGACATCTGCGCCAAGGTCTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCAATAATTCCTGTTACAAATTATAGGTATGAAACGACGG
GTATTCGTCCAGAACAGTTTAGGGAGGCAATGATGCTGAAACAAGTTCAAAAGAAAATTCAAGATATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCAC
TGTGTAGAAGACGATCTCAAACGCCTACAAATTGGATATCCATCCGTCGCGATAAGATTTGAGATTCAAAAAGGGATACAAGATCCTTATGAAGATTGTGTTGCAGCCAT
GAGAGTATACAAAAGAATGAGATCAGAAGTTCATAGGATAGAGAACCATCCAATGGCTTCAGATCCACAAAACAAAAATAACTTTGCAGTTTGGAGGGAAAATGAGCTTC
AGAGAATGAGCCCAGAACAGATGTTGGACATTTCAAGGTCTGATTATTATTGTTGGTGCATCGACTCCATGATTTGA
Protein sequenceShow/hide protein sequence
MDNHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARF
ANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGH
CVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI