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Tan0007814 (gene) of Snake gourd v1 genome

Gene IDTan0007814
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG02:75727264..75729764
RNA-Seq ExpressionTan0007814
SyntenyTan0007814
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0019205 - nucleobase-containing compound kinase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067681.1 UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa]8.0e-1236.28Show/hide
Query:  LWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSG--------NTFG--------HWWKRVWKAGVPPRVKLFIWRAFHDCIPTMAN
        LWD++ L L   ++EV  +S +PF  T  V   +WHFD     +  SG        N  G        HWW R+WK  +P ++K+ +WRAFH  +P +  
Subjt:  LWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSG--------NTFG--------HWWKRVWKAGVPPRVKLFIWRAFHDCIPTMAN

Query:  LHHRRLDVSMPCP
        L  RR+D+S  CP
Subjt:  LHHRRLDVSMPCP

XP_011470502.1 PREDICTED: uncharacterized protein LOC105353223 [Fragaria vesca subsp. vesca]2.1e-1235.77Show/hide
Query:  GTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK---------FEVG--------ASSSGNTFGHW---WKRVWKAGVPPRVKLFIWRA
        G +GE  W+   L   F D E R I ++P S  GG DR +WHFD+         + V          +SS ++ G W   WK+VWK  VPP+V+L  WR 
Subjt:  GTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK---------FEVG--------ASSSGNTFGHW---WKRVWKAGVPPRVKLFIWRA

Query:  FHDCIPTMANLHHRRLDVSMPCP
          + +PT   L  + +D+S+ CP
Subjt:  FHDCIPTMANLHHRRLDVSMPCP

XP_021603893.1 uncharacterized protein LOC110608920 [Manihot esculenta]1.8e-1133.64Show/hide
Query:  LWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK-------------FEVGASSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIPTMANLHH
        +W++  L   F  +++R I  +P S T   D  +WHFDK              ++   SS N  G  W  +W   VPP+VK F WRA+ + +PT  NL  
Subjt:  LWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK-------------FEVGASSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIPTMANLHH

Query:  RRLDVSMPCP
        + +DV   CP
Subjt:  RRLDVSMPCP

XP_021668479.1 uncharacterized protein LOC110656165 [Hevea brasiliensis]2.3e-1134.91Show/hide
Query:  WDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK---------FEVGASSSGNTFGH----WWKRVWKAGVPPRVKLFIWRAFHDCIPTMANLHHR
        WD++ L   F  ++V  IS +P S     D  +WHFDK         + V     G   G      W+++W   +PP++K F+WRA+ D +PT  NL  R
Subjt:  WDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK---------FEVGASSSGNTFGH----WWKRVWKAGVPPRVKLFIWRAFHDCIPTMANLHHR

Query:  RLDVSM
         LDVS+
Subjt:  RLDVSM

XP_030486845.1 uncharacterized protein LOC115703751 [Cannabis sativa]5.5e-1332.48Show/hide
Query:  TGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK----------------FEVGASSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIP
        T E  W+++ L+ YF   +V  I  +P + T   D L+WH +                  E   S SG     WWK+ W+  +P +V++F+WRA +DC+P
Subjt:  TGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK----------------FEVGASSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIP

Query:  TMANLHHRRLDVSMPCP
          A LHH+ +  S  CP
Subjt:  TMANLHHRRLDVSMPCP

TrEMBL top hitse value%identityAlignment
A0A5A7VQ24 Adenylate kinase3.9e-1236.28Show/hide
Query:  LWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSG--------NTFG--------HWWKRVWKAGVPPRVKLFIWRAFHDCIPTMAN
        LWD++ L L   ++EV  +S +PF  T  V   +WHFD     +  SG        N  G        HWW R+WK  +P ++K+ +WRAFH  +P +  
Subjt:  LWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSG--------NTFG--------HWWKRVWKAGVPPRVKLFIWRAFHDCIPTMAN

Query:  LHHRRLDVSMPCP
        L  RR+D+S  CP
Subjt:  LHHRRLDVSMPCP

A0A803LRA3 Uncharacterized protein7.8e-1337.17Show/hide
Query:  WDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK-----------------FEVGASSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIPTMAN
        W  D L  +F D EV EI ++P +  GG D   WHF K                  E  ASSSG      W R+WKA +PP++KLF WR  H+ I   ++
Subjt:  WDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDK-----------------FEVGASSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIPTMAN

Query:  LHHRRLDVSMPCP
        L  R + V   CP
Subjt:  LHHRRLDVSMPCP

A0A803NN93 Uncharacterized protein5.4e-1432.76Show/hide
Query:  TGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHF---DKFEVGA-------------SSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIP
        + +  WD+DKL   F   +V  I ++P S   G D  VWH+   + + V +             SS  +    WWK+ W   +P +VK+F WR  H+ +P
Subjt:  TGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHF---DKFEVGA-------------SSSGNTFGHWWKRVWKAGVPPRVKLFIWRAFHDCIP

Query:  TMANLHHRRLDVSMPC
        + +NLHHRR+  S  C
Subjt:  TMANLHHRRLDVSMPC

A0A803P9P5 Uncharacterized protein5.0e-1228.57Show/hide
Query:  LLHQRGSLARRRALGTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFD-----------------KFEVGASSSGNTFGHWWKRVWKAGV
        L+ +  SL+ + +   T +  W+   L   F + +V +I  +P +     D+L+W+F+                 + ++ A+SS N+   WWK+ W   +
Subjt:  LLHQRGSLARRRALGTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFD-----------------KFEVGASSSGNTFGHWWKRVWKAGV

Query:  PPRVKLFIWRAFHDCIPTMANLHHRRLDVSMPC
        P ++K+F+WRA HDC+P    LHHR +  S  C
Subjt:  PPRVKLFIWRAFHDCIPTMANLHHRRLDVSMPC

A0A803PEK6 Uncharacterized protein2.3e-1231.36Show/hide
Query:  ALGTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSGNTF-----GHW--------WKRVWKAGVPPRVKLFIWRAFHDCI
        +L T G   WDV+ +D  F++++   I ++P      +D ++W FD   + +  S         G W        WK +WK  +PP++K  +WRA  +C+
Subjt:  ALGTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSGNTF-----GHW--------WKRVWKAGVPPRVKLFIWRAFHDCI

Query:  PTMANLHHRRLDVSMPCP
        PTM +L  +R++VS+ CP
Subjt:  PTMANLHHRRLDVSMPCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.7e-0420.34Show/hide
Query:  WDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSGNTFGHWW----------------------KRVWKAGVPPRVKLFIWRAFHDCI
        WD  K+  + D  +   I R+  + +   D+++W+++        S    G+W                        R+W   + P++K F+WRA    +
Subjt:  WDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSGNTFGHWW----------------------KRVWKAGVPPRVKLFIWRAFHDCI

Query:  PTMANLHHRRLDVSMPCP
         T   L  R + +   CP
Subjt:  PTMANLHHRRLDVSMPCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTACAAAAGGAAAAACGCACGAGTTCGAGCCAAATCATCGAAGAGGACGCTATTGTCGCATGGGTGTTGCAAAGGGTTGGTCTGTGGTTGCTGCTGCACCAACG
TGGGTCGCTTGCTCGAAGGCGTGCCCTTGGTACAACTGGAGAAGAGTTGTGGGATGTGGATAAGTTGGATCTTTATTTTGATGACCAGGAGGTGCGCGAAATAAGCAGAG
TCCCTTTTTCTTCGACAGGTGGGGTGGATCGTCTGGTGTGGCATTTTGACAAATTTGAGGTTGGGGCGTCATCTAGTGGAAATACCTTTGGGCATTGGTGGAAGAGGGTG
TGGAAGGCGGGGGTACCTCCTAGGGTGAAGTTGTTTATATGGAGAGCTTTTCATGATTGTATCCCAACTATGGCAAATCTACATCATCGAAGGCTGGATGTTTCTATGCC
TTGCCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGTACAAAAGGAAAAACGCACGAGTTCGAGCCAAATCATCGAAGAGGACGCTATTGTCGCATGGGTGTTGCAAAGGGTTGGTCTGTGGTTGCTGCTGCACCAACG
TGGGTCGCTTGCTCGAAGGCGTGCCCTTGGTACAACTGGAGAAGAGTTGTGGGATGTGGATAAGTTGGATCTTTATTTTGATGACCAGGAGGTGCGCGAAATAAGCAGAG
TCCCTTTTTCTTCGACAGGTGGGGTGGATCGTCTGGTGTGGCATTTTGACAAATTTGAGGTTGGGGCGTCATCTAGTGGAAATACCTTTGGGCATTGGTGGAAGAGGGTG
TGGAAGGCGGGGGTACCTCCTAGGGTGAAGTTGTTTATATGGAGAGCTTTTCATGATTGTATCCCAACTATGGCAAATCTACATCATCGAAGGCTGGATGTTTCTATGCC
TTGCCCGTAA
Protein sequenceShow/hide protein sequence
MIVQKEKRTSSSQIIEEDAIVAWVLQRVGLWLLLHQRGSLARRRALGTTGEELWDVDKLDLYFDDQEVREISRVPFSSTGGVDRLVWHFDKFEVGASSSGNTFGHWWKRV
WKAGVPPRVKLFIWRAFHDCIPTMANLHHRRLDVSMPCP