; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007854 (gene) of Snake gourd v1 genome

Gene IDTan0007854
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationLG01:101984533..101989508
RNA-Seq ExpressionTan0007854
SyntenyTan0007854
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]2.1e-13592.62Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQT D SSAK+RETPGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVGSTQFQSSDSIVKTP+Q GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYST+DEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]1.6e-13592.99Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQT D SSAK+RETPGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVGSTQFQSSDSIVKTP+Q GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]6.5e-13793.73Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTND SSAK+RETPGLVP TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVGSTQFQSSDSIVKTP+Q GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_023524340.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]1.9e-13693.7Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTND S +KSRETPG+VPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQH
        DTKQMDEIQDGMY+RV GHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNG  STQFQSSDS VK  VQ GSSGYQTASSGLSS+QH
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQH

Query:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKI+DSIRSLEDEGLIYSTIDE+HFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]1.4e-13492.25Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFS +QFDS SGFTSSQTND SSAKSRE+PGLVPVTVKQISEASHSGEEKANFV+NGVDITNV IVGKVSEKAERNTDITFTVDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ  NG G TQFQSSDSIVKTPVQ GSSG+QTASSG+ SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein5.2e-13290.04Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSS+QFDS SGFTSSQTND SSAKSRE+PGL+PVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DT QM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ   G GSTQ Q+SDSIVKTPVQ GS+GY T SS + SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSSVAKERGIH+DELSQQLK+P+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like2.7e-13391.51Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSS+QFDSGSGFTSSQTND SSAKSRE+PGLVPVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITFTVDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQ   G GSTQ Q+SDSIVKTPVQ GSSGY T SS + SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSSVAKERGIHRDELSQQLKIP+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A5.4e-12990.37Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  D +SAKSRE+PGLVPVTVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQH
        DTKQMD+IQDGMYIRVNGHLK+FQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ NGV STQ QSSDS V   VQ GSSGYQTASS LSS QH
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQH

Query:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKN D+LVLDYLQLPSSVAKE+GIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like3.1e-13793.73Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTND SSAK+RETPGLVP TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVGSTQFQSSDSIVKTP+Q GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like1.5e-13492.31Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQTND SSAK+RETPGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTAS--SGLSS
        DTKQMDEIQDGMYIRVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVGSTQFQSSDSIVKTP+Q GSSGYQTAS  S L S
Subjt:  DTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGSTQFQSSDSIVKTPVQCGSSGYQTAS--SGLSS

Query:  EQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.8e-2537.23Show/hide
Query:  SGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTFDTK
        S +G  ++    PS  +     G VP TV  IS +     +  G     F I+GV+ TNV ++G+V     R+TD+ FT+DD TG+I   RW+ D  DT+
Subjt:  SGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTFDTK

Query:  QMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ
            IQ+G+Y++V  +L  FQ+ KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q     S Q   ++     P   G   YQ
Subjt:  QMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ

Q6H7J5 Replication protein A 32 kDa subunit B8.7e-4436.82Show/hide
Query:  SSSQFDSGSGFTSSQTNDPSSA---------KSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCK
        ++S    G GF  SQ  + +           KSR    L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+DDGTGR+   
Subjt:  SSSQFDSGSGFTSSQTNDPSSA---------KSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCK

Query:  RWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR--NSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTA
        RW ND+ DTK+M +IQ+G Y+ VNG LK FQ  +Q+ A+SVR +TNF+++T HF+ C+H HL     K Q N   +T    + ++ +  +    S     
Subjt:  RWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR--NSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTA

Query:  SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKS
        +S  S+ Q+T     N  +LVL+    P+ +  + G+  D +S++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A7.6e-4843.06Show/hide
Query:  MFSSSQFD--SGSGFTSSQ---TNDPSSAKSRETPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGC
        M S SQ D  S S FTSSQ    +  + +KSR     +P+TVKQISEA  S   GE+ A FV++GV+  NV +VG VS K ERNTD++FT+DDGTGR+  
Subjt:  MFSSSQFD--SGSGFTSSQ---TNDPSSAKSRETPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGC

Query:  KRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTAS
         RWVND  D+ +   +Q+GMY+ V G LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q      T      S + +    G S   T +
Subjt:  KRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTAS

Query:  SGLSSEQHTVDV----KKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSA
        S  S+    + V    K + +  VL+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  SGLSSEQHTVDV----KKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B1.3e-4738.32Show/hide
Query:  FSSSQFDSGSGFTSSQT-----NDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV
        F  +   +G GF  SQ         SS K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQT-----NDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLS
        +   +T++M+ ++ GMY+R++GHLK+FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+   +          +  + +   +  YQT  S   
Subjt:  NDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLS

Query:  SEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
          Q   D      + VL+YL  P  +  E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  SEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A8.7e-6849.29Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      +  S+AK+R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG          V T  Q GS+  Q
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A26.2e-6949.29Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      +  S+AK+R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG          V T  Q GS+  Q
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A26.2e-6949.29Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      +  S+AK+R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG          V T  Q GS+  Q
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA329.2e-4938.32Show/hide
Query:  FSSSQFDSGSGFTSSQT-----NDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV
        F  +   +G GF  SQ         SS K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQT-----NDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLS
        +   +T++M+ ++ GMY+R++GHLK+FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+   +          +  + +   +  YQT  S   
Subjt:  NDTFDTKQMDEIQDGMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLS

Query:  SEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
          Q   D      + VL+YL  P  +  E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  SEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA321.2e-4839.36Show/hide
Query:  SSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLK
        SS ++R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T++M+ ++ GMY+R++GHLK
Subjt:  SSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLK

Query:  VFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPSS
        +FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+   +          +  + +   +  YQT  S     Q   D      + VL+YL  P  
Subjt:  VFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPSS

Query:  VAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        +  E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  VAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTAGCAGCCAGTTTGATTCCGGCAGCGGATTTACGTCCTCTCAGACCAATGATCCCTCTTCGGCGAAGAGTCGAGAAACGCCGGGTCTGGTTCCAGTAACTGT
AAAACAGATAAGTGAAGCTTCCCATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGTGTTGACATTACAAATGTTACGATCGTTGGGAAGGTCTCCGAGAAAGCTG
AAAGGAATACTGACATCACATTCACCGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAAGAT
GGAATGTATATACGGGTGAATGGGCATTTGAAAGTATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
TATTGAATGCATACATGACCACCTGCGAAATTCCAAGTTACAGCCCAATGGAGTTGGATCGACACAGTTCCAATCCTCGGATTCAATTGTGAAGACTCCAGTGCAGTGTG
GCTCCAGTGGATATCAGACAGCATCTTCTGGACTATCGTCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGACGAACTGGTCCTTGACTATCTGCAGCTGCCCTCC
AGCGTTGCAAAAGAAAGAGGAATACACAGAGATGAACTTTCCCAACAATTGAAAATTCCTTTGGAGAAAATTCTGGACTCCATAAGATCTCTTGAAGATGAAGGTTTGAT
ATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
CATGAATTTGCATGGACAGAAGCGAATTCATAGGGCTCTATGGGCGCTGTAGCTCTTCGTCTTTCGTCGTTTCGAGCCCGCTATGCTCAGGATCGATATTGCCGCTCATA
AGATCAGGCGGGAAATCTGAGCATCAATGGCGGGAAAACGAAAAGCTTCTACTTCATAAGTTCGTATTTGCATCTGAATTCTTTCGCCACTCTCTCCTCATTGTTGGTTG
TTCATCGATTTATCACTCACGGGATTTTGAAGAATGTTCTCTAGCAGCCAGTTTGATTCCGGCAGCGGATTTACGTCCTCTCAGACCAATGATCCCTCTTCGGCGAAGAG
TCGAGAAACGCCGGGTCTGGTTCCAGTAACTGTAAAACAGATAAGTGAAGCTTCCCATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGTGTTGACATTACAAATG
TTACGATCGTTGGGAAGGTCTCCGAGAAAGCTGAAAGGAATACTGACATCACATTCACCGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACT
TTTGACACTAAGCAAATGGATGAAATACAAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAGTATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCC
TGTTACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACATGACCACCTGCGAAATTCCAAGTTACAGCCCAATGGAGTTGGATCGACACAGTTCCAATCCT
CGGATTCAATTGTGAAGACTCCAGTGCAGTGTGGCTCCAGTGGATATCAGACAGCATCTTCTGGACTATCGTCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGAC
GAACTGGTCCTTGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGAATACACAGAGATGAACTTTCCCAACAATTGAAAATTCCTTTGGAGAAAATTCTGGA
CTCCATAAGATCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAGAATTGTTAATTTTTTAGGTTTTTTTCCTTACAAT
ATTTAATTTCACTATGCTTTAGATGTGGTTGGACATATACTAGTTGCTTGAAACAGATCTATTTCCTGCCTTGCTTTCAGCCTCAAAAGGTTCAATGTATATGTATTTTG
AAGCTTTTGCTTGTCTAAATTCTAAAGTAAGATCAACTTTTTTCTAGGGGTGAAATGAAAAGGCTACCAATAATTTCCAATCCA
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTSSQTNDPSSAKSRETPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDTFDTKQMDEIQD
GMYIRVNGHLKVFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGSTQFQSSDSIVKTPVQCGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPS
SVAKERGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA