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Tan0007890 (gene) of Snake gourd v1 genome

Gene IDTan0007890
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG08:47218529..47218933
RNA-Seq ExpressionTan0007890
SyntenyTan0007890
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]5.6e-1442.34Show/hide
Query:  SFSPLVLSLLISLFFVGLSTTEGL------VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLI----------------------------------
        SFS   LSL ISL F  + T EG       VTVNITN L+  +N LT+HCKSG+DDLG HQL  L                                   
Subjt:  SFSPLVLSLLISLFFVGLSTTEGL------VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLI----------------------------------

Query:  --NRSHC--TNYLWIVGEKGLCLFNTNTRKYDICYTW
          +R+ C  T  LWIVGE+GLC+F+  T  YDICYTW
Subjt:  --NRSHC--TNYLWIVGEKGLCLFNTNTRKYDICYTW
ONI26956.1 hypothetical protein PRUPE_1G058100 [Prunus persica]1.2e-0836.54Show/hide
Query:  VNITNVLESHNPLTLHCKSGNDDLGFHQLPPLI------------------------------------NRSHCTNYLWIVGEKGLCLFNTNTRKYDICY
        VNITN L     LT+HCKS +DDLG H LPPLI                                    ++  C   +W++   G CLFN  TR+YDICY
Subjt:  VNITNVLESHNPLTLHCKSGNDDLGFHQLPPLI------------------------------------NRSHCTNYLWIVGEKGLCLFNTNTRKYDICY

Query:  TWPP
         W P
Subjt:  TWPP
XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]9.9e-1137.04Show/hide
Query:  VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLIN--------------------------------------RSHCTNYLWIVGEKGLCLFNTNTRK
        +TVNITN +   +N LT+HCKSG+DDLG H+LP L++                                      R + T  LWI+ EKG+C+FN +T+ 
Subjt:  VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLIN--------------------------------------RSHCTNYLWIVGEKGLCLFNTNTRK

Query:  YDICYTWP
        YD CY WP
Subjt:  YDICYTWP
XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]2.4e-1241.28Show/hide
Query:  LVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPL------------------------------------INRSHCTNY-LWIVGEKGLCLFNTNTRKY
        LVTVNITN L   + LT+HCKSG+DDLG HQL PL                                     +R  C    LWIVGE+G+C+F+  T+KY
Subjt:  LVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPL------------------------------------INRSHCTNY-LWIVGEKGLCLFNTNTRKY

Query:  DICYTWPPK
        D CYTW  K
Subjt:  DICYTWPPK
XP_022138779.1 S-protein homolog 5 [Momordica charantia]7.6e-1945.74Show/hide
Query:  LVLSL----LISLFFVGLSTTEGLVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPLINRSH------------------------------------C
        LVLSL    L S   V +       +VNITN+LESH  LT+HCKS +DDLGFHQLPPLI+ +                                     C
Subjt:  LVLSL----LISLFFVGLSTTEGLVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPLINRSH------------------------------------C

Query:  TNYLWIVGEKGLCLFNTNTRKYDICYTWP
        T  LWIVGEKGLCL+N+ T KYDICYTWP
Subjt:  TNYLWIVGEKGLCLFNTNTRKYDICYTWP
TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog2.7e-1442.34Show/hide
Query:  SFSPLVLSLLISLFFVGLSTTEGL------VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLI----------------------------------
        SFS   LSL ISL F  + T EG       VTVNITN L+  +N LT+HCKSG+DDLG HQL  L                                   
Subjt:  SFSPLVLSLLISLFFVGLSTTEGL------VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLI----------------------------------

Query:  --NRSHC--TNYLWIVGEKGLCLFNTNTRKYDICYTW
          +R+ C  T  LWIVGE+GLC+F+  T  YDICYTW
Subjt:  --NRSHC--TNYLWIVGEKGLCLFNTNTRKYDICYTW
A0A1S3CDK4 S-protein homolog4.8e-1137.04Show/hide
Query:  VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLIN--------------------------------------RSHCTNYLWIVGEKGLCLFNTNTRK
        +TVNITN +   +N LT+HCKSG+DDLG H+LP L++                                      R + T  LWI+ EKG+C+FN +T+ 
Subjt:  VTVNITNVLES-HNPLTLHCKSGNDDLGFHQLPPLIN--------------------------------------RSHCTNYLWIVGEKGLCLFNTNTRK

Query:  YDICYTWP
        YD CY WP
Subjt:  YDICYTWP
A0A1S3CP53 S-protein homolog1.1e-1241.28Show/hide
Query:  LVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPL------------------------------------INRSHCTNY-LWIVGEKGLCLFNTNTRKY
        LVTVNITN L   + LT+HCKSG+DDLG HQL PL                                     +R  C    LWIVGE+G+C+F+  T+KY
Subjt:  LVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPL------------------------------------INRSHCTNY-LWIVGEKGLCLFNTNTRKY

Query:  DICYTWPPK
        D CYTW  K
Subjt:  DICYTWPPK
A0A6J1CB24 S-protein homolog3.7e-1945.74Show/hide
Query:  LVLSL----LISLFFVGLSTTEGLVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPLINRSH------------------------------------C
        LVLSL    L S   V +       +VNITN+LESH  LT+HCKS +DDLGFHQLPPLI+ +                                     C
Subjt:  LVLSL----LISLFFVGLSTTEGLVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPLINRSH------------------------------------C

Query:  TNYLWIVGEKGLCLFNTNTRKYDICYTWP
        T  LWIVGEKGLCL+N+ T KYDICYTWP
Subjt:  TNYLWIVGEKGLCLFNTNTRKYDICYTWP
M5XR83 S-protein homolog5.9e-0936.54Show/hide
Query:  VNITNVLESHNPLTLHCKSGNDDLGFHQLPPLI------------------------------------NRSHCTNYLWIVGEKGLCLFNTNTRKYDICY
        VNITN L     LT+HCKS +DDLG H LPPLI                                    ++  C   +W++   G CLFN  TR+YDICY
Subjt:  VNITNVLESHNPLTLHCKSGNDDLGFHQLPPLI------------------------------------NRSHCTNYLWIVGEKGLCLFNTNTRKYDICY

Query:  TWPP
         W P
Subjt:  TWPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.5e-0426.85Show/hide
Query:  TVNITNVLESHNPLTLHCKSGNDDLGFHQLPP-----------------------LINRSHCTNY------------------LWIVGEKGLCLFNTNTR
        TV I N L +   L  HCKS +DDLG   L P                         N SH  +                   +W +   G C FN  T+
Subjt:  TVNITNVLESHNPLTLHCKSGNDDLGFHQLPP-----------------------LINRSHCTNY------------------LWIVGEKGLCLFNTNTR

Query:  KYDICYTW
        ++D+CY W
Subjt:  KYDICYTW
AT5G12060.1 Plant self-incompatibility protein S1 family1.5e-0427.07Show/hide
Query:  LVLSLLISLFFVGLSTTEGL-----VTVNITNVLESHNPLTLHCKSGNDDLGFHQLPP-----------LIN---------------------------R
        +V+ LLI + F  + T   +       V ITN L     L LHCKS +DDLG   L P           ++                            R
Subjt:  LVLSLLISLFFVGLSTTEGL-----VTVNITNVLESHNPLTLHCKSGNDDLGFHQLPP-----------LIN---------------------------R

Query:  SH--CTNYLWIVGEKGLCLFNTNTRKYDICYTW
        SH  C N +W +  +G C+F+ +   ++ICY W
Subjt:  SH--CTNYLWIVGEKGLCLFNTNTRKYDICYTW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGTTCATTTTCACCACTTGTATTGTCTCTATTAATCTCGTTATTTTTTGTTGGCCTAAGTACCACTGAAGGATTGGTTACGGTCAATATAACAAATGTTCTAGA
AAGTCACAATCCACTCACTCTTCATTGCAAATCCGGCAATGACGATTTGGGATTTCACCAGTTGCCGCCTTTGATCAACAGATCGCATTGCACAAATTATTTATGGATCG
TTGGTGAAAAAGGTCTCTGTTTGTTCAATACTAACACCCGCAAGTACGATATTTGCTATACGTGGCCACCTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGTTCATTTTCACCACTTGTATTGTCTCTATTAATCTCGTTATTTTTTGTTGGCCTAAGTACCACTGAAGGATTGGTTACGGTCAATATAACAAATGTTCTAGA
AAGTCACAATCCACTCACTCTTCATTGCAAATCCGGCAATGACGATTTGGGATTTCACCAGTTGCCGCCTTTGATCAACAGATCGCATTGCACAAATTATTTATGGATCG
TTGGTGAAAAAGGTCTCTGTTTGTTCAATACTAACACCCGCAAGTACGATATTTGCTATACGTGGCCACCTAAATAA
Protein sequenceShow/hide protein sequence
MERSFSPLVLSLLISLFFVGLSTTEGLVTVNITNVLESHNPLTLHCKSGNDDLGFHQLPPLINRSHCTNYLWIVGEKGLCLFNTNTRKYDICYTWPPK