; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007917 (gene) of Snake gourd v1 genome

Gene IDTan0007917
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG01:74298725..74300240
RNA-Seq ExpressionTan0007917
SyntenyTan0007917
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64330.1 hypothetical protein VITISV_014666 [Vitis vinifera]1.8e-1648.19Show/hide
Query:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK
        +R+ N++P+P+ PD+Q+EE++Q+ Q+ YDG  I+EWN+DG+SD+ ++N++ EM++AS AY+ R   D  I   L+ GFTGQLK
Subjt:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK

CAN67572.1 hypothetical protein VITISV_036870 [Vitis vinifera]7.8e-2032.99Show/hide
Query:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDGVVENTILRRNRVNVEQNVANVQYEGQP
        MNT++   AL +SP G T    S+ LDKS   +PK + W+ +     W    A     +R+ +     E  D +++                   +E +P
Subjt:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDGVVENTILRRNRVNVEQNVANVQYEGQP

Query:  QSPTQTDMDN-RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK
         +    +++  ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+DG+++Y I+  + EM + S AY+   +  DH +A+ +V GFTGQLK
Subjt:  QSPTQTDMDN-RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK

CAN75928.1 hypothetical protein VITISV_021028 [Vitis vinifera]2.3e-1931.38Show/hide
Query:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDG---VVENTILRRN---RVNVEQ-----
        MNT++   AL +SP G T    S+ LDKS   +PK + W+ +     W    A     +R+ ++ QI++  DG   +V +   R +   RV+V +     
Subjt:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDG---VVENTILRRN---RVNVEQ-----

Query:  ------------------NVANVQYEGQPQSPTQTD-------------MDN----RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYL
                          N  NV+  G   S  + D             ++N    ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+D +++Y 
Subjt:  ------------------NVANVQYEGQPQSPTQTD-------------MDN----RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYL

Query:  IINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK
        I+  + EM + S AY+   +  DH +A+ +V GFTGQLK
Subjt:  IINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK

RVX10070.1 hypothetical protein CK203_013013 [Vitis vinifera]1.8e-1648.19Show/hide
Query:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK
        +R+ N++P+P+ PD+Q+EE++Q+ Q+ YDG  I+EWN+DG+SD+ ++N++ EM++AS AY+ R   D  I   L+ GFTGQLK
Subjt:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]1.9e-2647.68Show/hide
Query:  KRNSNLAQIIEPTDGVVENTIL-RRNRVNVEQN-VANVQYEGQPQSPTQTDMDNR--------------SVNWYPQPSFPDIQFEEKTQMTQAFYDGLAI
        K  + +A+I E  D ++   +  + + VNV  N   N ++E +  +  +    NR                NWYPQPSFPDIQFEEKT  TQA YDGLAI
Subjt:  KRNSNLAQIIEPTDGVVENTIL-RRNRVNVEQN-VANVQYEGQPQSPTQTDMDNR--------------SVNWYPQPSFPDIQFEEKTQMTQAFYDGLAI

Query:  HEWNVDGISDYLIINVINEMLIASNAYRQRG-KRDHEIAELLVVGFTGQLK
        +EWN+DG+SDYLI+NV+NEM++A+ AY+ +G K DH+IA++LV GFTGQLK
Subjt:  HEWNVDGISDYLIINVINEMLIASNAYRQRG-KRDHEIAELLVVGFTGQLK

TrEMBL top hitse value%identityAlignment
A0A438JM71 Uncharacterized protein8.7e-1748.19Show/hide
Query:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK
        +R+ N++P+P+ PD+Q+EE++Q+ Q+ YDG  I+EWN+DG+SD+ ++N++ EM++AS AY+ R   D  I   L+ GFTGQLK
Subjt:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK

A5AQL0 CCHC-type domain-containing protein1.1e-1931.38Show/hide
Query:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDG---VVENTILRRN---RVNVEQ-----
        MNT++   AL +SP G T    S+ LDKS   +PK + W+ +     W    A     +R+ ++ QI++  DG   +V +   R +   RV+V +     
Subjt:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDG---VVENTILRRN---RVNVEQ-----

Query:  ------------------NVANVQYEGQPQSPTQTD-------------MDN----RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYL
                          N  NV+  G   S  + D             ++N    ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+D +++Y 
Subjt:  ------------------NVANVQYEGQPQSPTQTD-------------MDN----RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYL

Query:  IINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK
        I+  + EM + S AY+   +  DH +A+ +V GFTGQLK
Subjt:  IINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK

A5B688 CCHC-type domain-containing protein3.8e-2032.99Show/hide
Query:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDGVVENTILRRNRVNVEQNVANVQYEGQP
        MNT++   AL +SP G T    S+ LDKS   +PK + W+ +     W    A     +R+ +     E  D +++                   +E +P
Subjt:  MNTNISPRALRSSPNGSTILIESN-LDKSSITVPKSLSWEQITRNPTWKLTEAFTP-PKRNSNLAQIIEPTDGVVENTILRRNRVNVEQNVANVQYEGQP

Query:  QSPTQTDMDN-RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK
         +    +++  ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+DG+++Y I+  + EM + S AY+   +  DH +A+ +V GFTGQLK
Subjt:  QSPTQTDMDN-RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAELLVVGFTGQLK

A5C8I5 Uncharacterized protein8.7e-1748.19Show/hide
Query:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK
        +R+ N++P+P+ PD+Q+EE++Q+ Q+ YDG  I+EWN+DG+SD+ ++N++ EM++AS AY+ R   D  I   L+ GFTGQLK
Subjt:  NRSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK

M5XBI0 Uncharacterized protein1.7e-1730.56Show/hide
Query:  MNTNISPRALRSSPNGSTILIESNLDKSSITVPKSLSWEQITRNPTWKLTEAF-------TPPKRNSNLAQIIEPTDGVV----ENTILRRN----RVNV
        MNT + P+A      G T L ++NL+KS++ +PK + W  IT    W L E           PKR S LA   E  D +     E T L  +    R   
Subjt:  MNTNISPRALRSSPNGSTILIESNLDKSSITVPKSLSWEQITRNPTWKLTEAF-------TPPKRNSNLAQIIEPTDGVV----ENTILRRN----RVNV

Query:  EQNVANVQYEGQPQSPTQTDMDN-----------RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRD
        ++++  +          Q++++            ++ N+YP+P+  D+QFEE        YD  +I EWN+DG+++Y IIN +  M++ + A + +G RD
Subjt:  EQNVANVQYEGQPQSPTQTDMDN-----------RSVNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRD

Query:  HEIAELLVVGFTGQLK
          +A+ ++ GF GQLK
Subjt:  HEIAELLVVGFTGQLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACTAACATCTCTCCAAGAGCCCTGAGGTCTTCTCCGAATGGATCAACAATTCTCATTGAATCAAATCTTGATAAGTCCTCAATCACTGTTCCGAAAAGTTTATC
TTGGGAACAAATTACCAGAAATCCAACATGGAAGCTTACGGAAGCTTTCACTCCACCAAAAAGAAATTCAAATTTAGCTCAAATTATTGAACCTACAGATGGGGTTGTTG
AAAATACAATTCTCAGAAGAAACAGAGTCAATGTAGAACAAAATGTGGCAAATGTTCAATATGAAGGACAACCACAATCTCCAACTCAAACAGACATGGATAATCGATCT
GTGAATTGGTATCCACAACCATCATTCCCAGATATTCAATTTGAAGAAAAAACACAAATGACTCAAGCTTTTTATGATGGATTAGCCATCCACGAATGGAATGTGGATGG
TATATCCGATTATCTAATCATAAACGTCATAAACGAGATGTTAATCGCCTCCAATGCCTATAGACAAAGAGGCAAAAGGGACCATGAGATCGCTGAACTTCTCGTTGTAG
GATTTACAGGACAATTGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACTAACATCTCTCCAAGAGCCCTGAGGTCTTCTCCGAATGGATCAACAATTCTCATTGAATCAAATCTTGATAAGTCCTCAATCACTGTTCCGAAAAGTTTATC
TTGGGAACAAATTACCAGAAATCCAACATGGAAGCTTACGGAAGCTTTCACTCCACCAAAAAGAAATTCAAATTTAGCTCAAATTATTGAACCTACAGATGGGGTTGTTG
AAAATACAATTCTCAGAAGAAACAGAGTCAATGTAGAACAAAATGTGGCAAATGTTCAATATGAAGGACAACCACAATCTCCAACTCAAACAGACATGGATAATCGATCT
GTGAATTGGTATCCACAACCATCATTCCCAGATATTCAATTTGAAGAAAAAACACAAATGACTCAAGCTTTTTATGATGGATTAGCCATCCACGAATGGAATGTGGATGG
TATATCCGATTATCTAATCATAAACGTCATAAACGAGATGTTAATCGCCTCCAATGCCTATAGACAAAGAGGCAAAAGGGACCATGAGATCGCTGAACTTCTCGTTGTAG
GATTTACAGGACAATTGAAATAA
Protein sequenceShow/hide protein sequence
MNTNISPRALRSSPNGSTILIESNLDKSSITVPKSLSWEQITRNPTWKLTEAFTPPKRNSNLAQIIEPTDGVVENTILRRNRVNVEQNVANVQYEGQPQSPTQTDMDNRS
VNWYPQPSFPDIQFEEKTQMTQAFYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAELLVVGFTGQLK