; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007924 (gene) of Snake gourd v1 genome

Gene IDTan0007924
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationLG06:64967858..64969203
RNA-Seq ExpressionTan0007924
SyntenyTan0007924
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033232.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]5.9e-4148.62Show/hide
Query:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY
        ++K+ SNF +++ D++  K     +++ IA+RDNFQY AVKSNK  +I+ C  +NCK  L A  C +GD     W++ R+DSEHTCS+D+ LTDH+ A++
Subjt:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY

Query:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY
        +VIKD IK+ I +  + L TPK+I  YI  EHGL I YQ AWRARE  ++EI GSPEDSYKM+  F ++LK+  P ++  Y
Subjt:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY

KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]2.5e-3944.34Show/hide
Query:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY
        ++K+ SNF +++ D++  K +    ++ I +RDNFQY  VKSNK  +I+ C  +NCKW LRA  C +GD     W++ RFD EHT S+D+ LTDH+QA++
Subjt:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY

Query:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY---------YFFFVNIYLI
        +VIKD IK+ I++  + L TPK I  +I  EHGL ISYQKAWRA ++ +++I+GS EDSYKML  FA++L++ N  ++  Y         YFF      I
Subjt:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY---------YFFFVNIYLI

Query:  S---NCVLRIYL
        S   +C L I++
Subjt:  S---NCVLRIYL

KAA0060121.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]2.4e-4247.31Show/hide
Query:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY
        ++K+ SNF++++ D++  K +    ++ IAIRDNFQY  VKSNK  +I+ C  +NCKW LRA  C +GD     W++ RFDSEHTC +D+ L+D++QA++
Subjt:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY

Query:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYYYFFFV
        +V KD IK+ I++    L T K+I  +I  EHGL ISYQKAWRA E  +++I+GSP+DSYKML  FA++L++ NP   + Y  + V
Subjt:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYYYFFFV

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]3.0e-4549.46Show/hide
Query:  GRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDSWIIKRFDSEHTCSLDIILTD
        G+ Y  IDV  IS+ F I ++D + GK  L NALR +AIR NF ++ VKSN+  LIV C+ +NC+WFL A ++GD  S+ WI+K+F  EHTCSL+I+L D
Subjt:  GRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDSWIIKRFDSEHTCSLDIILTD

Query:  HKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTL
        H+QA++SVIK+ IK  IN     LP+ K+  S++  E  + I+YQKA  ARE  + EI+GSPE SY ++  F HM+K KNP ++
Subjt:  HKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTL

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]1.1e-4747.06Show/hide
Query:  MLDNIP--HIGSTNNTAIVEGRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDS
        +LD +P     S +N     G+ +++IDVT I  NF I+++D + GK  L NALR +AIRDNFQ++ +KSN+  LIV    DNC+W+L A ++GD  S+ 
Subjt:  MLDNIP--HIGSTNNTAIVEGRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDS

Query:  WIIKRFDSEHTCSLDIILTDHKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKN
        WI+K+F  EHTCSL+I+L DH+QA++SVIK+ IK   N+    L + K++ S++    G+ I+YQKAWR R+  + EIKGSPE+SY ++ SF HM+K+KN
Subjt:  WIIKRFDSEHTCSLDIILTDHKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKN

Query:  PDTL
        P ++
Subjt:  PDTL

TrEMBL top hitse value%identityAlignment
A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.2e-3944.34Show/hide
Query:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY
        ++K+ SNF +++ D++  K +    ++ I +RDNFQY  VKSNK  +I+ C  +NCKW LRA  C +GD     W++ RFD EHT S+D+ LTDH+QA++
Subjt:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY

Query:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY---------YFFFVNIYLI
        +VIKD IK+ I++  + L TPK I  +I  EHGL ISYQKAWRA ++ +++I+GS EDSYKML  FA++L++ N  ++  Y         YFF      I
Subjt:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY---------YFFFVNIYLI

Query:  S---NCVLRIYL
        S   +C L I++
Subjt:  S---NCVLRIYL

A0A5A7V2Y2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.2e-4247.31Show/hide
Query:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY
        ++K+ SNF++++ D++  K +    ++ IAIRDNFQY  VKSNK  +I+ C  +NCKW LRA  C +GD     W++ RFDSEHTC +D+ L+D++QA++
Subjt:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY

Query:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYYYFFFV
        +V KD IK+ I++    L T K+I  +I  EHGL ISYQKAWRA E  +++I+GSP+DSYKML  FA++L++ NP   + Y  + V
Subjt:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYYYFFFV

A0A5D3BGB6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.9e-4148.62Show/hide
Query:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY
        ++K+ SNF +++ D++  K     +++ IA+RDNFQY AVKSNK  +I+ C  +NCK  L A  C +GD     W++ R+DSEHTCS+D+ LTDH+ A++
Subjt:  VTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRA--CRYGDDNSDSWIIKRFDSEHTCSLDIILTDHKQASY

Query:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY
        +VIKD IK+ I +  + L TPK+I  YI  EHGL I YQ AWRARE  ++EI GSPEDSYKM+  F ++LK+  P ++  Y
Subjt:  SVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYY

A0A6J1C328 uncharacterized protein LOC1110069941.5e-4549.46Show/hide
Query:  GRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDSWIIKRFDSEHTCSLDIILTD
        G+ Y  IDV  IS+ F I ++D + GK  L NALR +AIR NF ++ VKSN+  LIV C+ +NC+WFL A ++GD  S+ WI+K+F  EHTCSL+I+L D
Subjt:  GRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDSWIIKRFDSEHTCSLDIILTD

Query:  HKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTL
        H+QA++SVIK+ IK  IN     LP+ K+  S++  E  + I+YQKA  ARE  + EI+GSPE SY ++  F HM+K KNP ++
Subjt:  HKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTL

A0A6J1DNQ8 uncharacterized protein LOC1110223475.4e-4847.06Show/hide
Query:  MLDNIP--HIGSTNNTAIVEGRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDS
        +LD +P     S +N     G+ +++IDVT I  NF I+++D + GK  L NALR +AIRDNFQ++ +KSN+  LIV    DNC+W+L A ++GD  S+ 
Subjt:  MLDNIP--HIGSTNNTAIVEGRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDS

Query:  WIIKRFDSEHTCSLDIILTDHKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKN
        WI+K+F  EHTCSL+I+L DH+QA++SVIK+ IK   N+    L + K++ S++    G+ I+YQKAWR R+  + EIKGSPE+SY ++ SF HM+K+KN
Subjt:  WIIKRFDSEHTCSLDIILTDHKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKN

Query:  PDTL
        P ++
Subjt:  PDTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGACAACATACCCCATATTGGTTCAACCAACAATACCGCTATTGTAGAAGGACGTGTATATCACAACATTGATGTTACTAAGATATCATCCAACTTTATCATTCA
AATGGATGACATATATATTGGTAAGGATGTATTACACAATGCATTACGCGGTATTGCAATTAGAGATAATTTTCAATACAAAGCTGTAAAATCGAACAAGACATTTCTGA
TTGTCCTATGTGTCCATGATAATTGCAAGTGGTTTCTTAGAGCTTGTCGTTATGGAGACGACAATAGTGACTCTTGGATCATTAAAAGATTTGATTCTGAACATACTTGC
TCTCTTGATATCATTTTAACGGATCACAAGCAAGCTTCATACTCTGTTATAAAGGATTGTATCAAGTCTTTGATTAATATAGATGACAACTCATTACCCACTCCGAAAGA
AATTAGAAGCTACATCCTTGTCGAACATGGTTTAAGAATAAGTTATCAGAAAGCTTGGCGTGCACGTGAATTAACAATGAATGAGATTAAAGGTTCACCAGAGGACTCCT
ACAAAATGCTTCTATCATTTGCTCACATGTTGAAGATCAAGAATCCTGATACGTTATCTTATTACTATTTTTTCTTTGTAAATATATATCTTATATCGAATTGTGTATTG
CGCATATACTTATGGCTATATATATTAACTTATAGTATATTTTTTTTCGTAATATTGGTTCGATAA
mRNA sequenceShow/hide mRNA sequence
TTCAACACAATTGTACAGTTTATACATAGCAGTATGCTATGTTATATGTTGTATTGCATATATACAAAGGTATATTTAAGTACAATGAATTATAACATTAACTTTCATCA
TACACCAGTATATATGATGTTATTCTTTTATATATAGAAGATATTTGTCATCTGATATATATACGAATATATATTTATAGGTAGTTGTGTTCTTCCTATGCTTTATGGTG
AATCTTGGAACCAGTCTTTCAATTATGTTAATTACAAAGTAACTGAGATATCATTACACTATGGAATGACATTCATTGACTTACAACAACGTATCATCAAAAAGTTGGGT
TGTGTTGACCATGTTGACTCTCCCGATATATATGTTTTCATAGGGTCCCAATCTTTCATTAAGAAAGATGCAGAAGTTAATACAGATACTGATGTTGATTGATTATTTAG
CATATTGACCTACCAATAGGGATGAATATTGTGCCCTAATTATTGATTCAAAGAACACCCTATCAGTTATGTTGGACAACATACCCCATATTGGTTCAACCAACAATACC
GCTATTGTAGAAGGACGTGTATATCACAACATTGATGTTACTAAGATATCATCCAACTTTATCATTCAAATGGATGACATATATATTGGTAAGGATGTATTACACAATGC
ATTACGCGGTATTGCAATTAGAGATAATTTTCAATACAAAGCTGTAAAATCGAACAAGACATTTCTGATTGTCCTATGTGTCCATGATAATTGCAAGTGGTTTCTTAGAG
CTTGTCGTTATGGAGACGACAATAGTGACTCTTGGATCATTAAAAGATTTGATTCTGAACATACTTGCTCTCTTGATATCATTTTAACGGATCACAAGCAAGCTTCATAC
TCTGTTATAAAGGATTGTATCAAGTCTTTGATTAATATAGATGACAACTCATTACCCACTCCGAAAGAAATTAGAAGCTACATCCTTGTCGAACATGGTTTAAGAATAAG
TTATCAGAAAGCTTGGCGTGCACGTGAATTAACAATGAATGAGATTAAAGGTTCACCAGAGGACTCCTACAAAATGCTTCTATCATTTGCTCACATGTTGAAGATCAAGA
ATCCTGATACGTTATCTTATTACTATTTTTTCTTTGTAAATATATATCTTATATCGAATTGTGTATTGCGCATATACTTATGGCTATATATATTAACTTATAGTATATTT
TTTTTCGTAATATTGGTTCGATAACAAAACTTAAACTTGATGACGATGGAAGGTTTAAACTTTTCTTTATGTCATTTGCTGCTAGTATTAATGTTTGGAATCACTGTCGA
CCAGTGATTTCAGTTGATGACACCCA
Protein sequenceShow/hide protein sequence
MLDNIPHIGSTNNTAIVEGRVYHNIDVTKISSNFIIQMDDIYIGKDVLHNALRGIAIRDNFQYKAVKSNKTFLIVLCVHDNCKWFLRACRYGDDNSDSWIIKRFDSEHTC
SLDIILTDHKQASYSVIKDCIKSLINIDDNSLPTPKEIRSYILVEHGLRISYQKAWRARELTMNEIKGSPEDSYKMLLSFAHMLKIKNPDTLSYYYFFFVNIYLISNCVL
RIYLWLYILTYSIFFFVILVR