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Tan0007981 (gene) of Snake gourd v1 genome

Gene IDTan0007981
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionStimulator of interferon protein
Genome locationLG06:54640469..54641915
RNA-Seq ExpressionTan0007981
SyntenyTan0007981
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5580.3Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCC+CGD+GFPDKLFRCIKC NRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHG+SS+RP    T+A  I SRS YSGD+IKHHHED+A+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        +V +KGK G A  V SPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

XP_022959271.1 uncharacterized protein LOC111460301 [Cucurbita moschata]6.1e-5680.3Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCC+CGD+GFPDKLFRCIKC NRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHG+SS+RP P  T+   I SRS YSGD+IKHHHED+A+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        +V +KGK G A  V SPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

XP_023006670.1 uncharacterized protein LOC111499326 [Cucurbita maxima]3.2e-5781.06Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCC+CGD+GFPDKLFRC+KC NRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHG+SS+RP P  T+A  I SRS YSGD+IKHHHEDAA+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        +V +KGK G A   PSPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

XP_023548605.1 uncharacterized protein LOC111807219 [Cucurbita pepo subsp. pepo]2.2e-5881.82Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCC+CGD+GFPDKLFRCIKC NRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHG+SS+RP P  T    I SRS YSGD+IKHHHEDAA+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        +  +KGK GAA  VPSPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]2.5e-5781.06Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCCMCGDIGFPDKLFRC KC NRFQHSYCSNYYSESAEPIE+CDWCQCEGR+SSRSHGSSS+RP   GT+A  + SRSEYSG++IKHHH+D+A+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        ++ EKGKHG A   PSPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein2.1e-5480.45Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDR-IKHHHEDAA
        MVDLQIVCCMCGDIGFPDKLF C KCRNRFQHSYCSNYYSESAEPIE+CDWCQCEGRS+SRSHGSSS+RP   GT+A  I +RSEYSGD+ IKHHH D  
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDR-IKHHHEDAA

Query:  SSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
         S  EKGKHG A    SPRPTTRRYKLLKDVMC
Subjt:  SSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC1035044138.9e-5380.74Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRS-SSRSHG-SSSKRPSPAGTDALRITSRSEYSGDR-IKHHHED
        MVDLQIVCCMCGDIGFPDKLF C KCRNRFQHSYCSNYYSESAEPIE+CDWCQCEGRS SSRSHG SSS+RP   GT+A  I SRSEYS D+ IKHHH+D
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRS-SSRSHG-SSSKRPSPAGTDALRITSRSEYSGDR-IKHHHED

Query:  AASSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
           S  EKGKHG A   PSPRPTTRRYKLLKDVMC
Subjt:  AASSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

A0A6J1E160 uncharacterized protein LOC1110249979.2e-5074.81Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKR---PSPAGTDALRITSRSEYSGDRIKHHHED
        MVDLQIVCCMCGDIGFPDKLFRC KCRNRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHGSSSK+   P P       I +RS+Y+  +IKH  + 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKR---PSPAGTDALRITSRSEYSGDRIKHHHED

Query:  AASSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
         A+  A+KGKH    GVPSPRPTTRRYKLLKDVMC
Subjt:  AASSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603013.0e-5680.3Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCC+CGD+GFPDKLFRCIKC NRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHG+SS+RP P  T+   I SRS YSGD+IKHHHED+A+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        +V +KGK G A  V SPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993261.6e-5781.06Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS
        MVDLQIVCC+CGD+GFPDKLFRC+KC NRFQHSYCSNYYSESAEPIE+CDWCQCEGRSSSRSHG+SS+RP P  T+A  I SRS YSGD+IKHHHEDAA+
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAAS

Query:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
        +V +KGK G A   PSPRPTTRRYKLLKDVMC
Subjt:  SVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein3.5e-3355.88Show/hide
Query:  LQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSS---RSHGSSSKRPSPAGTDALRITSRSEYS-GDRIKHH---HE
        ++ VCCMCGD+GF DKLF C  CR RFQHSYCSNYY + AEP E+CDWC+ + R  S   R  GSSSK+PS +       ++RSEYS G RIKH+   H+
Subjt:  LQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSS---RSHGSSSKRPSPAGTDALRITSRSEYS-GDRIKHH---HE

Query:  DAASSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
          A  VA  G      GV SP+  TRRYKLLKDVMC
Subjt:  DAASSVAEKGKHGAAIGVPSPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein2.7e-3355.56Show/hide
Query:  MVDLQ-IVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRS----HGSSSKRPSPAGTDALRITSRSEYSG--DRIKH
        MVDL+  VCCMCGD+GF DKLF C KC NRFQHSYCS+YY E A+PI++CDWCQCE +S + +    +G SSKR           + RSEYS    +IK 
Subjt:  MVDLQ-IVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRS----HGSSSKRPSPAGTDALRITSRSEYSG--DRIKH

Query:  H--HEDAASSV---AEKGKHGAAIGVPSPRPTTRRYKLLKDVMC
           ++  +SS+   A+KGK     GVPSPRP TRRYKLLKDVMC
Subjt:  H--HEDAASSV---AEKGKHGAAIGVPSPRPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCTTCAGATCGTTTGCTGCATGTGCGGCGACATCGGTTTCCCTGACAAGCTCTTCCGCTGCATCAAGTGCCGCAACCGCTTTCAACACTCGTATTGCAGCAA
TTATTATAGCGAATCGGCGGAACCAATTGAGATGTGTGATTGGTGCCAGTGTGAGGGACGGAGCTCTTCCAGATCACACGGAAGCTCCTCCAAGAGACCGTCGCCGGCCG
GTACCGATGCCCTCAGAATCACGAGCCGCTCCGAATATTCCGGCGACAGAATCAAGCACCACCATGAAGATGCCGCCTCCTCCGTCGCCGAGAAGGGGAAACACGGCGCC
GCCATCGGCGTTCCGTCGCCGAGGCCGACCACGCGCAGGTACAAGCTTCTAAAGGACGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
CGACTCCAAAAACTTTCAAAGCCCACCACTTTTCTTTATATTTAAGTCTCTCTCTCTCTGTGTGTGGTGGTTCATCTTCATCTTCATCGAAATTTCATTTTTTTTTTTTT
ATCTCTCTCTCTCTGTCTCTAGAAATTTAATAGCGATTAGGAGGAAATCAGAAGAATGGTGGATCTTCAGATCGTTTGCTGCATGTGCGGCGACATCGGTTTCCCTGACA
AGCTCTTCCGCTGCATCAAGTGCCGCAACCGCTTTCAACACTCGTATTGCAGCAATTATTATAGCGAATCGGCGGAACCAATTGAGATGTGTGATTGGTGCCAGTGTGAG
GGACGGAGCTCTTCCAGATCACACGGAAGCTCCTCCAAGAGACCGTCGCCGGCCGGTACCGATGCCCTCAGAATCACGAGCCGCTCCGAATATTCCGGCGACAGAATCAA
GCACCACCATGAAGATGCCGCCTCCTCCGTCGCCGAGAAGGGGAAACACGGCGCCGCCATCGGCGTTCCGTCGCCGAGGCCGACCACGCGCAGGTACAAGCTTCTAAAGG
ACGTAATGTGCTGAAACAAAAGGGCGGTGAATAAAACGCAGCGTTTTGATGGCCGAATGGGGGGTTCGTTTTATTTTCTCTCTATACTTCTCTCTTCTAATCCTCAAATG
TTAATTATTATTATTATTATTATTATATAAAACCGTATATATATAGATATATAATATAGGTTGCTTTTGAGTGTGCGTGGGTATGTAGACTACTCCATGAATTTTGCTTT
GTGTTATATATATGTGTGTGTTATGAATATATTATATAGTTTTCCCTTTTATATCTTCAAATAAAAAAAATGTAATTATAATACATTTTCTTTCTCTCTTCTCTCAACTT
CCATGCAAATGTAAACCCATAGGGTTAGGTAAAAATTTTGGATTTTCAACTTTGATCAACGTGGTGCTCGCTCCTAGCTTCTTTACTGCAGAAAGAGTATAATAAGTCTT
GAATTTTTTTTTTTCATGTCAAATAATTTACCGTGGTTAACTTCATTAATTTAATGCGC
Protein sequenceShow/hide protein sequence
MVDLQIVCCMCGDIGFPDKLFRCIKCRNRFQHSYCSNYYSESAEPIEMCDWCQCEGRSSSRSHGSSSKRPSPAGTDALRITSRSEYSGDRIKHHHEDAASSVAEKGKHGA
AIGVPSPRPTTRRYKLLKDVMC