; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007991 (gene) of Snake gourd v1 genome

Gene IDTan0007991
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranslation initiation factor IF-3
Genome locationLG08:7602319..7606307
RNA-Seq ExpressionTan0007991
SyntenyTan0007991
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]1.9e-12683.95Show/hide
Query:  MAGLTSRFPFKPLLSHSSATATATTSSSA-------TAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPAD
        MAGL+  FPFK LLS SSA AT T+SSSA       ++ TPFRTS   LP+SSS SNAF+FRLHKSNSLRL+F    ++PIR++VFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSHSSATATATTSSSA-------TAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPAD

Query:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D++GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]8.5e-12785.52Show/hide
Query:  MAGLTSRFPFKPLLSHSSATATATT----SSSATAATPFRTSISPLPLSSS-KSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPADSK
        MAGL+  FPFK LLS SSA +T T+     +S+++ TPFRTS   LP+SSS  SNAF+ RLHKSNSLRLVF    ++PIR++VFAR GGAPRSSGP DSK
Subjt:  MAGLTSRFPFKPLLSHSSATATATT----SSSATAATPFRTSISPLPLSSS-KSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPADSK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]2.0e-13691.75Show/hide
Query:  MAGLTSRFPFKPLLSHSSAT---ATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDL
        MAGLTSRFPFKPLLS SSAT   A A++SSSA AA PFRTSISPLPLSSS+SNAF FRLH SNSLRL+ ++PIR +VFAR+GGAPRSSGPADSKRSDDD 
Subjt:  MAGLTSRFPFKPLLSHSSAT---ATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDL

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        LKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_023536766.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]5.5e-12686.55Show/hide
Query:  MAGLTSRFPFKPLLSHSSATATATTS--SSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDLG
        MAGLT RFPFKPLLSHSSAT T + S  SS+  ATP RTS+SPLPLSSSKSNAFRFRLH SNSL LVFTT  RSTV A+YGG  R SGPADSKR DD LG
Subjt:  MAGLTSRFPFKPLLSHSSATATATTS--SSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDLG

Query:  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRL
        +D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRL
Subjt:  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRL

Query:  KAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        KAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSA V
Subjt:  KAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]5.7e-13188.85Show/hide
Query:  MAGLTSRFPFKPLLSHSSATATATTSSSAT---AATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLV----FTTPIRSTVFARYGGAPRSSGPADSKRS
        MAGL+ RFPFKPLLS S+ TAT T++++AT   +ATPFRTSI PLPLSSSK+NAF+FRL KSNSLRLV     ++PIR++VF+RYGGAPRSSGPADSKRS
Subjt:  MAGLTSRFPFKPLLSHSSATATATTSSSAT---AATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLV----FTTPIRSTVFARYGGAPRSSGPADSKRS

Query:  DDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
        DD+ GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
Subjt:  DDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD

Query:  YSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV
        YSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSAGV
Subjt:  YSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-39.1e-12783.95Show/hide
Query:  MAGLTSRFPFKPLLSHSSATATATTSSSA-------TAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPAD
        MAGL+  FPFK LLS SSA AT T+SSSA       ++ TPFRTS   LP+SSS SNAF+FRLHKSNSLRL+F    ++PIR++VFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSHSSATATATTSSSA-------TAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPAD

Query:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D++GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A1S3BV82 Translation initiation factor IF-34.1e-12785.52Show/hide
Query:  MAGLTSRFPFKPLLSHSSATATATT----SSSATAATPFRTSISPLPLSSS-KSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPADSK
        MAGL+  FPFK LLS SSA +T T+     +S+++ TPFRTS   LP+SSS  SNAF+ RLHKSNSLRLVF    ++PIR++VFAR GGAPRSSGP DSK
Subjt:  MAGLTSRFPFKPLLSHSSATATATT----SSSATAATPFRTSISPLPLSSS-KSNAFRFRLHKSNSLRLVF----TTPIRSTVFARYGGAPRSSGPADSK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1DYM5 Translation initiation factor IF-39.7e-13791.75Show/hide
Query:  MAGLTSRFPFKPLLSHSSAT---ATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDL
        MAGLTSRFPFKPLLS SSAT   A A++SSSA AA PFRTSISPLPLSSS+SNAF FRLH SNSLRL+ ++PIR +VFAR+GGAPRSSGPADSKRSDDD 
Subjt:  MAGLTSRFPFKPLLSHSSAT---ATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDL

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        LKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1FCR3 Translation initiation factor IF-32.5e-12485.91Show/hide
Query:  MAGLTSRFPFKPLLSHSSA--TATATTSSSATAATPFRTSISPLPL-SSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDL
        MAGLT+RFPFKPLLSHSSA  T +A   SS+  ATP RTSISPLPL SSSKSNAFRFRLH SNSL L+FTT  RSTV A+YGG  R SGPADSKR DD L
Subjt:  MAGLTSRFPFKPLLSHSSA--TATATTSSSATAATPFRTSISPLPL-SSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDL

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        G+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        LKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSA V
Subjt:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1I0C0 Translation initiation factor IF-32.2e-12586.99Show/hide
Query:  MAGLTSRFPFKPLLSHSSATAT---ATTSSSATA-ATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLT RFPFKPLLSHSSAT T   A  SSSATA ATP RTSISPLPLSSSK NAFRFR H SNSL LVFTT  RSTV ++YGGA RSSGPADSKR DD 
Subjt:  MAGLTSRFPFKPLLSHSSATAT---ATTSSSATA-ATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
        LG+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSA V
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-38.2e-3242.61Show/hide
Query:  DSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  DL      IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic1.3e-7460.79Show/hide
Query:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFA---RYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNV
        A  T++T       T    ++S   L S  S     RL K+  L     TP     FA   R+GG     R SG       K ++ D  LD+S+IRS  V
Subjt:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFA---RYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNV

Query:  RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGD
        RLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGD
Subjt:  RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGD

Query:  KVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        KVKVIV++KGRENEFRNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  KVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

Q8R9C2 Translation initiation factor IF-35.3e-3144.1Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARK
        IR   VRLID     +GI+S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-39.0e-3143.33Show/hide
Query:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG
        P   K+   DL      IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM 
Subjt:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A +FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic2.2e-7762.72Show/hide
Query:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIR----STVFARY--GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNN
        A  T+T   +A  A   +T   P+     KS  F  RL       +V  +P        +  RY  GG   S  P D     K S+DD  LD+SAIRS  
Subjt:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIR----STVFARY--GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNN

Query:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDG
        VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVR++AARKFL+DG
Subjt:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDG

Query:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA
        DKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VSA
Subjt:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein3.8e-0831.25Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + + V  VS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         K ++ G +VK + V  K +  E      +EL+ RF   IG+ A  E+    DR   +V+V +         PPKK
Subjt:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein9.5e-7660.79Show/hide
Query:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFA---RYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNV
        A  T++T       T    ++S   L S  S     RL K+  L     TP     FA   R+GG     R SG       K ++ D  LD+S+IRS  V
Subjt:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFA---RYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNV

Query:  RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGD
        RLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGD
Subjt:  RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGD

Query:  KVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        KVKVIV++KGRENEFRNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  KVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein1.6e-7862.72Show/hide
Query:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIR----STVFARY--GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNN
        A  T+T   +A  A   +T   P+     KS  F  RL       +V  +P        +  RY  GG   S  P D     K S+DD  LD+SAIRS  
Subjt:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIR----STVFARY--GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNN

Query:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDG
        VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVR++AARKFL+DG
Subjt:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDG

Query:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA
        DKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VSA
Subjt:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein1.6e-6254.48Show/hide
Query:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIR----STVFARY--GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNN
        A  T+T   +A  A   +T   P+     KS  F  RL       +V  +P        +  RY  GG   S  P D     K S+DD  LD+SAIRS  
Subjt:  ATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIR----STVFARY--GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNN

Query:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDG
        VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                              YNIDQHDYSVR++AARKFL+DG
Subjt:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDG

Query:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA
        DKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VSA
Subjt:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCAGCAGATTTCCTTTCAAACCTCTCTTATCCCATTCCTCCGCCACCGCCACCGCCACCACTTCCTCCTCCGCCACCGCCGCCACTCCCTTCCGGAC
CTCAATTTCCCCTCTCCCCCTCTCCTCCTCTAAATCCAATGCCTTCAGATTCCGCCTTCACAAGTCCAACTCTTTGCGTCTCGTTTTCACTACTCCAATTCGTAGTACTG
TATTTGCTCGATACGGCGGTGCTCCTCGATCTTCAGGGCCGGCGGATTCTAAGCGCTCTGACGATGATCTTGGTCTCGATGTTTCCGCCATCAGGTCGAATAATGTGAGG
CTTATCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACCTGATGCAGATCC
TCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAGAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGTATGGATTTAAAAGAGCTTA
AAATGGGTTACAACATCGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAAGTTCTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAACTTGAAAGGTCGT
GAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAAGCCAAAAACTTCAGAGACAGGAATATATTTAT
TGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAAGACAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTAAATTTTCTTTTTCAATTTCTTAAAATATTTCCGGCAAACTCCGACCCTCCACTGCCCCGTTCCACAGCTCAAAGCTATGGCTGGGCTCACCAGCAGATTTCCTTT
CAAACCTCTCTTATCCCATTCCTCCGCCACCGCCACCGCCACCACTTCCTCCTCCGCCACCGCCGCCACTCCCTTCCGGACCTCAATTTCCCCTCTCCCCCTCTCCTCCT
CTAAATCCAATGCCTTCAGATTCCGCCTTCACAAGTCCAACTCTTTGCGTCTCGTTTTCACTACTCCAATTCGTAGTACTGTATTTGCTCGATACGGCGGTGCTCCTCGA
TCTTCAGGGCCGGCGGATTCTAAGCGCTCTGACGATGATCTTGGTCTCGATGTTTCCGCCATCAGGTCGAATAATGTGAGGCTTATCGATGCACAACAGAACATGGTTGG
AATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACCTGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATA
AATATAGGTATGAACTGCAAAAGAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGTATGGATTTAAAAGAGCTTAAAATGGGTTACAACATCGACCAACATGAT
TACTCTGTTCGTTTGAAAGCTGCAAGGAAGTTCTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGA
GCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAAGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTAC
AGAAGGCTCAAGAACCCCCCAAGAAAAAAGACAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAAGCTCGGGAAGCGTCGAGCTTAAGCCAAAAATAGAACGGTTAG
TCGCAACAATCTAAATCTTCTTCTACCATAGAGAAATTTGAGAGATTAATGTATAATGTTTTGTTTAATCTAATGCATCATACTGCTGTCCATCCTATTTTTTAGTGGAA
TGTTTAGAAATCAGATGTGTTACTAATTCTTTTGAAAACACCAAATCATACAGCATTCGTAGCACTGAGCTTAGTTTTTAGTTGCTCCTAACTTAGTTTTCAGAACCTAG
GATGATGGTATAAGAGAGATTATGCAACTCAATTTGGACTAACAAATTTACCGCCTGTGATAAATATGCTCATGGACAGAATATAGACTCAACTTCTTTACCTCGGATTG
CATAGGCATAACCCCCCTCGGTTAGATAGGCTTGATTCAAGGTGAAGGGCATAGGGTTCAAGTAGAAATTGAAAAACTTGATTGGATCAATTCAGTTCGGGGGCGGATTT
ACCATGGGCTATTTTTT
Protein sequenceShow/hide protein sequence
MAGLTSRFPFKPLLSHSSATATATTSSSATAATPFRTSISPLPLSSSKSNAFRFRLHKSNSLRLVFTTPIRSTVFARYGGAPRSSGPADSKRSDDDLGLDVSAIRSNNVR
LIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGR
ENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV