; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008012 (gene) of Snake gourd v1 genome

Gene IDTan0008012
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionbinding partner of ACD11 1-like
Genome locationLG01:26264431..26267261
RNA-Seq ExpressionTan0008012
SyntenyTan0008012
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148750.1 binding partner of ACD11 1 isoform X1 [Cucumis sativus]5.7e-13694.72Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MSIKTV+VSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FN+VAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_008448657.1 PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]4.4e-13695.07Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MSIKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_008448658.1 PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]1.3e-13594.72Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M IKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_038906357.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]3.6e-13896.48Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MSIKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKD QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG KAPGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW ADAFNKVAKAAGEVGQKTKEKVVVSEEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_038906358.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.0e-13796.13Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M IKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKD QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG KAPGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW ADAFNKVAKAAGEVGQKTKEKVVVSEEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

TrEMBL top hitse value%identityAlignment
A0A0A0L545 RRM domain-containing protein2.8e-13694.72Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MSIKTV+VSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FN+VAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A1S3BK74 binding partner of ACD11 1 isoform X26.2e-13694.72Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M IKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A1S3BK81 binding partner of ACD11 1 isoform X12.1e-13695.07Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MSIKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A5A7UH68 Binding partner of ACD11 1 isoform X26.2e-13694.72Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M IKTVKVSNVSLGAS+RDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSW AD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A6J1CV14 binding partner of ACD11 1-like isoform X15.2e-13593.99Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MSIKTVKVSNVSLGASDRD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPP A G  APGAA
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQGLIL
        IM NR+VMSGTSW ADAFNKVAKAAGEVGQKTKEK V SEEEQ+KKTVEDFAQVHLSESPKAA+APPEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQGLIL

SwissProt top hitse value%identityAlignment
P87216 Protein vip19.3e-0425.14Show/hide
Query:  VKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFR
        V V+N+S   +++ I +FFSF G +  +  +   E +Q A + F+     +TA+LL  A +    + IT          A +     GA    AA    +
Subjt:  VKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFR

Query:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGT------LLVSDKVREVDQKFQVSEK
            ++S +L++G+ L    L  +   D+ + ++S          K  G  E   +G         V++K  EVD KF +S+K
Subjt:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGT------LLVSDKVREVDQKFQVSEK

Q9LFD5 Binding partner of ACD11 14.4e-7058.33Show/hide
Query:  IKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AE
        +++VKV N+S GA++ DIKEFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   + AE
Subjt:  IKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-9770.55Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP-PPAPGAKAPGA
        M++ TVKVSNVSLGA+DRD+KEFFSFSGDI YLE QSE+ER+++AYVTFKD QGAETAVLLSGATIVD SV +++ P+Y+L PEA A   P    K+P A
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP-PPAPGAKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQLTSTASAKVA+FDKKIGFT+KI+ GT++V +KVREVDQK+QVSEKTKSA A AE+ VSNAGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS

Query:  AIMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPK
        AIMKNRYV++G +W   AFNKVAKAA EVGQK KEKV ++EEE ++K V++FA+VHLSESPKAAS+  E ++  K
Subjt:  AIMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPK

AT5G16840.1 binding partner of acd11 13.1e-7158.33Show/hide
Query:  IKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AE
        +++VKV N+S GA++ DIKEFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   + AE
Subjt:  IKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G16840.2 binding partner of acd11 11.6e-7258.33Show/hide
Query:  IKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AE
        +++VKV N+S GA++ DIKEFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   + AE
Subjt:  IKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G16840.3 binding partner of acd11 16.2e-7258.27Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-
        M++++VKV N+S GA++ DIKEFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   + 
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE+ VS+AGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS

Query:  AIMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-8763.32Show/hide
Query:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP----PPAPGAKA
        MS+ TVKVSNVSL A++RD+KEFFSFSGDI YLE QSE++ S++AYVTFKD QGAETAVLL+G+TIVD SV +T+ P+Y+LPP+A A       +  + +
Subjt:  MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP----PPAPGAKA

Query:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS
        P   + S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQLTSTASA+V +FDK+IGFTEKI+ GT +VS+KV+EVDQKFQV+EKTKSA A AE+ VS
Subjt:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS

Query:  NAGSAIMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVS--EEEQRKKTVEDFAQVHLSESPKAA------SAPPEPQQRPKPE
        NAGSAIMKNRYV++G +W   AFN+V+KAA EVGQK KEKV ++  EEE++KK V++ A VHL+ESPKA       S  PE + +P  E
Subjt:  NAGSAIMKNRYVMSGTSWFADAFNKVAKAAGEVGQKTKEKVVVS--EEEQRKKTVEDFAQVHLSESPKAA------SAPPEPQQRPKPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTAAGACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGATCGAGATATCAAGGAGTTTTTTTCCTTTTCTGGTGATATTGAATATCTGGAAATGCAGAG
TGAAAGTGAACGGTCTCAAATTGCTTATGTAACCTTTAAGGATGCCCAAGGAGCAGAGACTGCCGTTCTTCTGTCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCA
CTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCAACCGCACCACCTCCTGCCCCAGGAGCTAAAGCACCTGGTGCTGCTGAGTCCGCCTTTCGGAAAGCAGAGGATGTG
GTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCAGCAAAGGCATTTGATGAGAAACACCAGTTAACTTCCACGGCCTCGGCCAAAGTTGC
TACATTCGATAAAAAAATCGGGTTCACCGAGAAAATTAGTGCTGGTACATTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTA
AATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCAATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGTGGGACTAGCTGGTTTGCTGATGCATTCAATAAG
GTAGCGAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAAACAGTCGAAGATTTTGCTCAGGTTCATCTCTC
GGAATCACCTAAAGCAGCATCTGCACCTCCTGAGCCTCAACAACGTCCCAAGCCCGAACCTGCTCAAGGTCTGATTCTCTGA
mRNA sequenceShow/hide mRNA sequence
CTCGTTTGTTCGTGCTATAGCGATTTTTTTTCATCAGAGGAGACGAAGACTTGAGGGCGCACTGAGAGAAAATCCCAAATTCAGAATCAAAATTTCCGTTCTAATTCGTG
TGGGTTTCAGTTTTCTGGCGATCGTCGGTTGATTCAGTCCCCGTTCCGGCGATTTTATCTTCGTCATTTCCAGCGATGTCGATTAAGACTGTTAAAGTCAGCAATGTCTC
CTTGGGAGCGTCTGATCGAGATATCAAGGAGTTTTTTTCCTTTTCTGGTGATATTGAATATCTGGAAATGCAGAGTGAAAGTGAACGGTCTCAAATTGCTTATGTAACCT
TTAAGGATGCCCAAGGAGCAGAGACTGCCGTTCTTCTGTCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCA
ACCGCACCACCTCCTGCCCCAGGAGCTAAAGCACCTGGTGCTGCTGAGTCCGCCTTTCGGAAAGCAGAGGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGG
TAAAGATGCACTCAACTCAGCAAAGGCATTTGATGAGAAACACCAGTTAACTTCCACGGCCTCGGCCAAAGTTGCTACATTCGATAAAAAAATCGGGTTCACCGAGAAAA
TTAGTGCTGGTACATTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGC
AATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGTGGGACTAGCTGGTTTGCTGATGCATTCAATAAGGTAGCGAAGGCAGCTGGAGAAGTTGGTCAGAAAAC
AAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAAACAGTCGAAGATTTTGCTCAGGTTCATCTCTCGGAATCACCTAAAGCAGCATCTGCACCTCCTGAGC
CTCAACAACGTCCCAAGCCCGAACCTGCTCAAGGTCTGATTCTCTGAATTGTTGTCATGTTTGTTGATATCTATGTCTGAAAGTTCTTGTAGTTGTAATGTGTACTTCCC
CTTCATTTCTGGCATCATGGTGGTTATATTTTAGGGTGAAAATATAGAATAGATTTCTTCCTCAATTAGTAGTCTGGACTTGATTGCATAAGATATCTTCATTTGACAGA
ATATAAAAACAGCAGATTTTTCCATATTGAGAACAAATTCTGCTTTTTCTACTATGCTATGTATCAGTGCAGTTCTGGGCTAGTTTTTGGAGTTCAGAGATTTATTTATT
ATGTGCTTGGGA
Protein sequenceShow/hide protein sequence
MSIKTVKVSNVSLGASDRDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDV
VSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWFADAFNK
VAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQGLIL