; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008017 (gene) of Snake gourd v1 genome

Gene IDTan0008017
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontranscription factor BEE 3-like
Genome locationLG11:23161454..23164988
RNA-Seq ExpressionTan0008017
SyntenyTan0008017
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR024097 - Basic helix-loop-helix leucine zipper transcription factor
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022994041.1 transcription factor BEE 3-like isoform X1 [Cucurbita maxima]6.8e-5579.27Show/hide
Query:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV
        ++LEMISNHFTV SSNESD Y+GTI  S NPFFT++FCFEKF HFNEIPS V PA  L SSA AN  S P FN E SK  GGRKRK  +NE+D EK K V
Subjt:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV

Query:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        IHVRAKRGQATDSHSLAERVRR+KINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
Subjt:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

XP_022994043.1 transcription factor BEE 3-like isoform X2 [Cucurbita maxima]6.8e-5579.27Show/hide
Query:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV
        ++LEMISNHFTV SSNESD Y+GTI  S NPFFT++FCFEKF HFNEIPS V PA  L SSA AN  S P FN E SK  GGRKRK  +NE+D EK K V
Subjt:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV

Query:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        IHVRAKRGQATDSHSLAERVRR+KINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
Subjt:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

XP_023551454.1 transcription factor BEE 1-like isoform X2 [Cucurbita pepo subsp. pepo]4.4e-5478.05Show/hide
Query:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV--PADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV
        ++LEMISNHFTV SSNESD Y+GTI  S NPFFT++FCFEKF HF+E PS V   A L SSA AN  S P FN E SK  GGRKRK  +NE D EK K V
Subjt:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV--PADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV

Query:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        IHVRAKRGQATDSHSLAERVRREKINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
Subjt:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

XP_038886374.1 transcription factor BEE 3-like isoform X1 [Benincasa hispida]8.9e-5578.4Show/hide
Query:  MSSN-LEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIH
        MSSN LEM+SNHFTV SSN++D +G   INPFFTESFCFEKF HFNEIPS V   LYS       S P FNR D K LGGRKRK  +NE+D EK KEVIH
Subjt:  MSSN-LEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIH

Query:  VRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        VRAKRGQATDSHSLAERVRREKINQRL+FLQDLVPGCYKTMGMAVM DVIINYIQSLQNQIE
Subjt:  VRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

XP_038886375.1 transcription factor BEE 3-like isoform X2 [Benincasa hispida]8.9e-5578.4Show/hide
Query:  MSSN-LEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIH
        MSSN LEM+SNHFTV SSN++D +G   INPFFTESFCFEKF HFNEIPS V   LYS       S P FNR D K LGGRKRK  +NE+D EK KEVIH
Subjt:  MSSN-LEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIH

Query:  VRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        VRAKRGQATDSHSLAERVRREKINQRL+FLQDLVPGCYKTMGMAVM DVIINYIQSLQNQIE
Subjt:  VRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

TrEMBL top hitse value%identityAlignment
A0A6J1CEL5 transcription factor BEE 3-like3.7e-5475.78Show/hide
Query:  MSSNLEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIHV
        MS N EM+S  FT  SSN SD++GTISINPFFTE FC     HFNEIPS VP  L SS  AN  S PP N +DSK LGG KRK  ++E+D EKQ+EVIHV
Subjt:  MSSNLEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIHV

Query:  RAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        RAKRGQATDSHSLAERVRREKINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSL+NQIE
Subjt:  RAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

A0A6J1FKZ5 transcription factor BEE 3-like3.1e-5376.22Show/hide
Query:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV--PADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV
        ++LEMISNHFTV SSNESD Y+GTI  S NPFFT++FCFEKF HFNEIPS V   A L SS   N  S P  + + SK  GGRKRK  +NE+D EK K V
Subjt:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV--PADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV

Query:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        IHVRAKRGQATDSHSLAERVRREKINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
Subjt:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

A0A6J1JY10 transcription factor BEE 3-like isoform X13.3e-5579.27Show/hide
Query:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV
        ++LEMISNHFTV SSNESD Y+GTI  S NPFFT++FCFEKF HFNEIPS V PA  L SSA AN  S P FN E SK  GGRKRK  +NE+D EK K V
Subjt:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV

Query:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        IHVRAKRGQATDSHSLAERVRR+KINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
Subjt:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

A0A6J1K416 transcription factor BEE 3-like isoform X23.3e-5579.27Show/hide
Query:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV
        ++LEMISNHFTV SSNESD Y+GTI  S NPFFT++FCFEKF HFNEIPS V PA  L SSA AN  S P FN E SK  GGRKRK  +NE+D EK K V
Subjt:  SNLEMISNHFTVGSSNESD-YRGTI--SINPFFTESFCFEKFGHFNEIPSYV-PAD-LYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV

Query:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        IHVRAKRGQATDSHSLAERVRR+KINQRL+FLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
Subjt:  IHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

A0A6P5T699 transcription factor bHLH755.7e-3158.5Show/hide
Query:  GSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLA
        G S     R T  + P F      + F H ++ P++     +S++    F+      E  K LGGRKRK + ++KDGEK KEVIHVRAKRGQATDSHSLA
Subjt:  GSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLA

Query:  ERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        ERVRREKIN+RLK LQ+LVPGCYKTMGMAVMLDV+I+Y+QSLQNQIE
Subjt:  ERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

SwissProt top hitse value%identityAlignment
A4D998 Transcription factor bHLH751.3e-2770.53Show/hide
Query:  NREDSKRLGGRKRKIDQNEKDG---EKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        N+E+S     RKR  ++   +G   +K K+V+HVRAKRGQATDSHSLAERVRREKIN+RLK LQDLVPGCYK MGMAVMLDVII+Y++SLQNQIE
Subjt:  NREDSKRLGGRKRKIDQNEKDG---EKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

Q8GWK7 Transcription factor BEE 33.1e-2669.32Show/hide
Query:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        +K    R+ K  +N ++ EK++EV+HVRA+RGQATDSHS+AERVRR KIN+RLK LQD+VPGCYKTMGMA MLD IINY+QSLQNQ+E
Subjt:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

Q8GZ13 Transcription factor BEE 14.1e-2670.45Show/hide
Query:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        S R G R +K  + E++ EK++EV+HVRA+RGQATDSHSLAERVRR KIN+RL+ LQD+VPGCYK MGMA MLD IINY+QSLQNQ+E
Subjt:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

Q9FJL4 Transcription factor bHLH787.9e-2262.22Show/hide
Query:  EDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        +D +  G  +     N K  E  K+ IHVRA+RGQATDSHSLAERVRREKI +R+K LQDLVPGC K  G A+MLD IINY+QSLQ Q+E
Subjt:  EDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

Q9SRT2 Transcription factor bHLH621.0e-2147.37Show/hide
Query:  FNEIPSYVPADLYS---------SASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV------IHVRAKRGQATDSHSLAERVRREKINQRLKF
        F  + S+VPA   S          +  N  S    ++E  ++     ++  ++E++G+K K +      IHVRA+RGQATDSHSLAERVRREKI++R+K 
Subjt:  FNEIPSYVPADLYS---------SASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEV------IHVRAKRGQATDSHSLAERVRREKINQRLKF

Query:  LQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        LQDLVPGC K  G A+MLD IINY+QSLQ Q+E
Subjt:  LQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

Arabidopsis top hitse value%identityAlignment
AT1G18400.1 BR enhanced expression 12.9e-2770.45Show/hide
Query:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        S R G R +K  + E++ EK++EV+HVRA+RGQATDSHSLAERVRR KIN+RL+ LQD+VPGCYK MGMA MLD IINY+QSLQNQ+E
Subjt:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.9e-2970.53Show/hide
Query:  NREDSKRLGGRKRKIDQNEKDG---EKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        N+E+S     RKR  ++   +G   +K K+V+HVRAKRGQATDSHSLAERVRREKIN+RLK LQDLVPGCYK MGMAVMLDVII+Y++SLQNQIE
Subjt:  NREDSKRLGGRKRKIDQNEKDG---EKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

AT1G73830.1 BR enhanced expression 32.2e-2769.32Show/hide
Query:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        +K    R+ K  +N ++ EK++EV+HVRA+RGQATDSHS+AERVRR KIN+RLK LQD+VPGCYKTMGMA MLD IINY+QSLQNQ+E
Subjt:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

AT1G73830.2 BR enhanced expression 32.2e-2769.32Show/hide
Query:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        +K    R+ K  +N ++ EK++EV+HVRA+RGQATDSHS+AERVRR KIN+RLK LQD+VPGCYKTMGMA MLD IINY+QSLQNQ+E
Subjt:  SKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE

AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.6e-2362.22Show/hide
Query:  EDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE
        +D +  G  +     N K  E  K+ IHVRA+RGQATDSHSLAERVRREKI +R+K LQDLVPGC K  G A+MLD IINY+QSLQ Q+E
Subjt:  EDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCAATTTAGAGATGATAAGCAACCATTTTACAGTGGGGAGCTCCAATGAAAGTGATTATCGAGGAACAATCTCCATTAATCCTTTTTTCACTGAGAGCTTTTG
TTTTGAAAAGTTTGGTCATTTTAATGAAATCCCAAGCTATGTTCCAGCAGATCTTTACTCCTCAGCATCTGCAAATAGATTTTCATTGCCTCCATTTAACAGAGAAGATT
CCAAGAGATTGGGGGGAAGAAAGAGGAAAATAGATCAAAATGAAAAGGATGGGGAGAAGCAAAAGGAAGTCATTCATGTGAGAGCAAAAAGAGGCCAAGCTACTGACAGC
CACAGTTTAGCAGAAAGAGTAAGAAGAGAGAAGATAAATCAGAGGCTGAAATTCTTACAGGACTTGGTTCCTGGATGCTACAAGACAATGGGAATGGCAGTAATGCTGGA
TGTGATCATAAATTACATTCAATCTCTGCAGAATCAGATCGAGAGTAGTCATGATACATTTAAGGGGATTTTTTTTTATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCAATTTAGAGATGATAAGCAACCATTTTACAGTGGGGAGCTCCAATGAAAGTGATTATCGAGGAACAATCTCCATTAATCCTTTTTTCACTGAGAGCTTTTG
TTTTGAAAAGTTTGGTCATTTTAATGAAATCCCAAGCTATGTTCCAGCAGATCTTTACTCCTCAGCATCTGCAAATAGATTTTCATTGCCTCCATTTAACAGAGAAGATT
CCAAGAGATTGGGGGGAAGAAAGAGGAAAATAGATCAAAATGAAAAGGATGGGGAGAAGCAAAAGGAAGTCATTCATGTGAGAGCAAAAAGAGGCCAAGCTACTGACAGC
CACAGTTTAGCAGAAAGAGTAAGAAGAGAGAAGATAAATCAGAGGCTGAAATTCTTACAGGACTTGGTTCCTGGATGCTACAAGACAATGGGAATGGCAGTAATGCTGGA
TGTGATCATAAATTACATTCAATCTCTGCAGAATCAGATCGAGAGTAGTCATGATACATTTAAGGGGATTTTTTTTTATCACTAA
Protein sequenceShow/hide protein sequence
MSSNLEMISNHFTVGSSNESDYRGTISINPFFTESFCFEKFGHFNEIPSYVPADLYSSASANRFSLPPFNREDSKRLGGRKRKIDQNEKDGEKQKEVIHVRAKRGQATDS
HSLAERVRREKINQRLKFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIESSHDTFKGIFFYH