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Tan0008037 (gene) of Snake gourd v1 genome

Gene IDTan0008037
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine-rich protein-related
Genome locationLG01:20294756..20295123
RNA-Seq ExpressionTan0008037
SyntenyTan0008037
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577543.1 hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2564.42Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME
        M+PI  E KQ  T+C +PTSKSA PEL+LDD KKNA          +MT+SPS +S CLCSPTTH+GSFRCR HR TA+SRGGS GSNLSDL QKSAA+E
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME

Query:  GSLD
         S++
Subjt:  GSLD

KAG7015599.1 hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2664.15Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME
        M+PI  E KQ  T+C +PTSKSA PEL+LDD KKNA          +MT+SPS +S CLCSPTTH+GSFRCR HR TA+SRGGS GSNLSDL QKSAA+E
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME

Query:  GSLDGQ
         S++G+
Subjt:  GSLDGQ

KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]2.3e-3785Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME
        MDPIRT+ KQ KT+CKTPTSKSA+ E + DDLKKNA+LLMSPTALSRMTKS SIKSNCLCSPTTHIGSFRCRRHRST++SRGGSVGSNLSDL QKS AME
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]1.7e-4089Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME
        MDPIRT+SKQ KT+CKTPTSKSA+ E + DDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRG SVGSNLSDLGQKS  ME
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]1.5e-3680.95Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAH-LLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAM
        MD +  E KQ K +CKTPT+KSALPELDLD+LKK++H L+MSPTALSRM+KSPS KSNCLCSPTTHIGSFRCRRHRSTA+SRGGSVGSNLSDL QKSAAM
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAH-LLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAM

Query:  EGSLD
        E SL+
Subjt:  EGSLD

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein1.1e-3785Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME
        MDPIRT+ KQ KT+CKTPTSKSA+ E + DDLKKNA+LLMSPTALSRMTKS SIKSNCLCSPTTHIGSFRCRRHRST++SRGGSVGSNLSDL QKS AME
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME

A0A5D3D753 Putative PGPS/D10 protein8.2e-4189Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME
        MDPIRT+SKQ KT+CKTPTSKSA+ E + DDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRG SVGSNLSDLGQKS  ME
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAME

A0A5N6L3X1 Uncharacterized protein4.4e-1852Show/hide
Query:  ESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAMEGSLDGQ
        E K  K + K    K  +PE++LDD+KK+ HLL+SP+      K      NCLCSPTTH+GSFRCR HR+++M RGGSVGS LS+L  KS A+  SL  Q
Subjt:  ESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAMEGSLDGQ

A0A6J1CNY2 uncharacterized protein LOC1110133677.2e-3780.95Show/hide
Query:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAH-LLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAM
        MD +  E KQ K +CKTPT+KSALPELDLD+LKK++H L+MSPTALSRM+KSPS KSNCLCSPTTHIGSFRCRRHRSTA+SRGGSVGSNLSDL QKSAAM
Subjt:  MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAH-LLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAM

Query:  EGSLD
        E SL+
Subjt:  EGSLD

W9SBP1 Uncharacterized protein2.6e-1859.3Show/hide
Query:  KSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAMEGSLDGQ
        K  +P+++L++LKK  HLL SP A   +TKS S + NCLCSPTTH GSFRCR HRS+ M RGGSVGSNLS+L +K  A+  SL+ Q
Subjt:  KSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAMEGSLDGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein5.0e-0646.88Show/hide
Query:  NAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV-GSNLSDLGQKSA
        N+ + +    LSR T     K+NCLCSPTTH GSFRCR HRS ++ R  S+  ++L D   K A
Subjt:  NAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV-GSNLSDLGQKSA

AT1G67910.2 unknown protein5.0e-0646.88Show/hide
Query:  NAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV-GSNLSDLGQKSA
        N+ + +    LSR T     K+NCLCSPTTH GSFRCR HRS ++ R  S+  ++L D   K A
Subjt:  NAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV-GSNLSDLGQKSA

AT3G13227.1 serine-rich protein-related7.4e-1046.43Show/hide
Query:  KSALPELDLDDLKKNAHLLMSPTALS---------RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA---MSRGGSVGSNLSDL
        K    ++  DD+K+     MSP              M+KS S++ NCLC+PTTH GSFRCR HR  A   MSRG SV SNLS L
Subjt:  KSALPELDLDDLKKNAHLLMSPTALS---------RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA---MSRGGSVGSNLSDL

AT5G25280.1 serine-rich protein-related8.5e-0633.33Show/hide
Query:  PTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRG-GSVGSNLSDLGQKSAAMEGSL
        P ++S    +D   +  N  + +S    S   K P  +  C+CSPTTH GSFRC  H++ A   G G+     + L  + +AM  SL
Subjt:  PTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRG-GSVGSNLSDLGQKSAAMEGSL

AT5G55980.1 serine-rich protein-related1.3e-0952.46Show/hide
Query:  RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSD-LGQKSAAMEGSLDGQ
        R +   S + NCLCSPTTH GSFRCR HR  +++R GS+GSNL+  L  KS+    SL  Q
Subjt:  RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSD-LGQKSAAMEGSLDGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGATCAGGACGGAATCTAAACAGGCGAAAACAGATTGCAAGACGCCGACCTCGAAATCGGCGCTCCCGGAGTTGGACTTAGACGATCTGAAGAAGAATGCGCA
TCTGCTAATGTCGCCGACGGCGTTATCGAGGATGACGAAGTCGCCGAGCATTAAATCGAACTGCCTCTGCTCTCCGACGACTCACATCGGATCGTTCCGCTGCCGGCGCC
ACCGGAGCACTGCCATGTCCCGCGGCGGCTCCGTCGGCTCCAACCTCTCCGATCTGGGTCAGAAATCGGCGGCGATGGAGGGTTCACTGGATGGCCAGTAG
mRNA sequenceShow/hide mRNA sequence
CCCTAATTAATCCTCCTCCTTCACACAATTCCCATTAAAAAAAAAAAATGGATCCGATCAGGACGGAATCTAAACAGGCGAAAACAGATTGCAAGACGCCGACCTCGAAA
TCGGCGCTCCCGGAGTTGGACTTAGACGATCTGAAGAAGAATGCGCATCTGCTAATGTCGCCGACGGCGTTATCGAGGATGACGAAGTCGCCGAGCATTAAATCGAACTG
CCTCTGCTCTCCGACGACTCACATCGGATCGTTCCGCTGCCGGCGCCACCGGAGCACTGCCATGTCCCGCGGCGGCTCCGTCGGCTCCAACCTCTCCGATCTGGGTCAGA
AATCGGCGGCGATGGAGGGTTCACTGGATGGCCAGTAG
Protein sequenceShow/hide protein sequence
MDPIRTESKQAKTDCKTPTSKSALPELDLDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDLGQKSAAMEGSLDGQ