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Tan0008086 (gene) of Snake gourd v1 genome

Gene IDTan0008086
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
Genome locationLG02:85577491..85578027
RNA-Seq ExpressionTan0008086
SyntenyTan0008086
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]5.8e-2366.23Show/hide
Query:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAER
        G  +  FSREE+KEIFREHD+DGDG+L   E++KA   LGHS+ FYKAHYG+A++D +GDGLI EDEL+KL+DYAER
Subjt:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAER

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.0e-2363.95Show/hide
Query:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        MS    +L+ SRE+IKEIFREHD+DGDG L  SEMVKAF   G  L FYKAHYG+AHAD +GDG I+E+EL+KLVDYAE+ Q++++
Subjt:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]5.8e-2362.79Show/hide
Query:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        MS    RL+ SRE+IKEIFREHD+DGDG L  +EMVKAF   G  L FYKAHYG+AHAD +GDG I+E+EL+KLVDYA++ Q++++
Subjt:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]4.7e-2566.27Show/hide
Query:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        G  +  FSREE+KEIFREHD+DGDG+L  SE++KA   LGHS+ FYKAHYG+A+ D +GDGLI EDEL+KL+DYAER Q R+R
Subjt:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.9e-2265Show/hide
Query:  RLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        RL+ SRE+IKEIFREHD+DGDG L  +EMVKAF   G  L FYKAHYG+AHAD +GDG I+E+EL+KLVDYA++ Q++++
Subjt:  RLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein2.3e-2566.27Show/hide
Query:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        G  +  FSREE+KEIFREHD+DGDG+L  SE++KA   LGHS+ FYKAHYG+A+ D +GDGLI EDEL+KL+DYAER Q R+R
Subjt:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

A0A0A0LRC1 Uncharacterized protein2.8e-2362.79Show/hide
Query:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        MS    RL+ SRE+IKEIFREHD+DGDG L  +EMVKAF   G  L FYKAHYG+AHAD +GDG I+E+EL+KLVDYA++ Q++++
Subjt:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

A0A5A7UYC0 Putative calcium-binding protein CML109.7e-2463.95Show/hide
Query:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        MS    +L+ SRE+IKEIFREHD+DGDG L  SEMVKAF   G  L FYKAHYG+AHAD +GDG I+E+EL+KLVDYAE+ Q++++
Subjt:  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

A0A5A7V2Z9 Putative calcium-binding protein CML102.8e-2366.23Show/hide
Query:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAER
        G  +  FSREE+KEIFREHD+DGDG+L   E++KA   LGHS+ FYKAHYG+A++D +GDGLI EDEL+KL+DYAER
Subjt:  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAER

A0A6J1KUW2 calmodulin-like2.4e-2267.09Show/hide
Query:  LKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
        +K SR +IKEIF EHD+DGDG+L  SE+ KAF+  G  +  YKAHYGLA+ADADGDGLI E+ELEKLVDYAER   +KR
Subjt:  LKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR

SwissProt top hitse value%identityAlignment
P18061 Calmodulin6.7e-0640Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EEIKE FR  D DG+GF+  +E+      LG  L+  +    +  AD DGDG I+ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV

P62184 Calmodulin6.7e-0638.46Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EEI+E FR  D DGDGF+  +E+      LG  L+  +    +  AD DGDG ++ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV

P69097 Calmodulin8.7e-0640Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EEIKE FR  D DG+GF+  +E+      LG  L+  +    +  AD DGDG I+ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV

P69098 Calmodulin8.7e-0640Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EEIKE FR  D DG+GF+  +E+      LG  L+  +    +  AD DGDG I+ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV

Q8RZB5 Probable calcium-binding protein CML103.9e-0638.36Show/hide
Query:  SSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKL
        S G        EE++ +FR+ D +GDG +  SE+   F  LGH+ +  +    +A ADADGDG I  DE   L
Subjt:  SSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKL

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein1.1e-0633.33Show/hide
Query:  FSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYA
        ++ E++  +FR  D DG+GF+  +E+  +   LGH+L+  +    +  AD+DGDG I+  E  K ++ A
Subjt:  FSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYA

AT1G66410.1 calmodulin 45.3e-0636.92Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EE+KE FR  D D +GF+  +E+      LG  L+  +    +  AD DGDG I+ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV

AT1G66410.2 calmodulin 45.3e-0636.92Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EE+KE FR  D D +GF+  +E+      LG  L+  +    +  AD DGDG I+ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV

AT3G03000.1 EF hand calcium-binding protein family2.4e-0633.33Show/hide
Query:  FSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYA
        ++ +++K IFR  D DG+G++  +E+  +   LGH+L+  +    +  AD DGDG ID  E  + +  A
Subjt:  FSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYA

AT5G21274.1 calmodulin 64.0e-0638.46Show/hide
Query:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV
        S EE+KE FR  D D +GF+  +E+      LG  LS  +    +  AD DGDG I+ +E  K++
Subjt:  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAA
GGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGC
TCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAA
mRNA sequenceShow/hide mRNA sequence
CTTACATCGATGACTAAGCAAAAGAAAAAAACAGAAACAAACATTTTAGAAGACAGTTAAAATCAGATAATTTGTGAGAAGAATGTCTTCTGGACCAGGCAGGCTAAAAT
TCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTT
TCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAA
TAGGAAGCGTTAAGGCTATATTTAATTTCCTCTGTTTCGCTAATAATCTCATTCGTTTCATGCATCAGTACTACTTTATTTTCAAGTTTCGACTTTTAATGTTATGTTCT
GTATAAAATAAAAAGAGGAGGAGCCGAGGAGGGCTAGCTTCCTAGTCACTTCTGCTTTCATTTCGCTATTAAATGGAAAGTGCTTTCAATCATCCAA
Protein sequenceShow/hide protein sequence
MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR