| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004154029.1 RNA polymerase sigma factor sigB [Cucumis sativus] | 1.0e-288 | 91.14 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFK T ANYSHHHSFLPTA S+YTKVRDPHSLRTQCILSAASPPTSTGT TT +VDRLKLPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEA+IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQSS K D LHFKWAQFMESERADIIGE +GVN RP++GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
ST ESD MEPTSEELELLQDELS++I V+S RQTERKARRTRAAEKT +SV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| XP_008460092.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo] | 6.0e-289 | 91.48 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFK T AN SHHHSF+PTA S+YTKVRDPHSLRTQCILSAASPPTSTGT TT NVDRLKLPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQ S K D LHFKWAQFMESERADIIGE +GVN RP++GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
ST ESD +EPTS+ELELLQDELS++I V+S RQTERKARRTRAAEKT +SVV KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAETAED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| XP_022155781.1 RNA polymerase sigma factor sigB [Momordica charantia] | 1.8e-296 | 93.02 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKTTAIT+TTTANYSHHH+FLPTANS+ TKVRDPHSLRTQCILSAASP TSTGT TTFNV+RLKLPP D NTDS+SAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSS+TG KSQSS K+D LHFKW QFMESERADIIG +GVNNRP +GDAL+
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
H TAESDY +PT+EELELLQDELS NIAVRS RQTER+A+RTRAAEK A+SVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAET+EDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| XP_022964550.1 RNA polymerase sigma factor sigB [Cucurbita moschata] | 3.4e-284 | 90.1 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT A TIT T SHHH+FLPTANSTY K RDPHSLRTQCILSAASPPT TGT TTFNVDRLKLPPFDTNTDSVSAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNSSR+ TKSQSS +++ LHFKW QFMESERADIIGE +GVNNRPV+GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
STAESD MEPTSEELELL+DE SK+IAVRS RQTERKARRTRA+EK A+SVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRSLEQK GINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
EA TAEDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
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| XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | 1.1e-290 | 92.01 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYS-HHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLR
MSCLLPQFKCHPETFSIQFK T ANY+ HHH+FLPTANS+YTKVRDPHSLRTQCILSAASPPTSTGT TT NVDRL LPPFDTNTDSVS ERLR
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYS-HHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLR
Query: SYLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDAL
SYLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVKVA+DAALL NNSNSSR G KS+SS + D LHFKWAQFMESERADIIGE +GVNNRP++ DAL
Subjt: SYLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDAL
Query: EHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELS
+ ST +SD MEPTSEELELLQDELS++I VRS RQTERKARRTRAAEKTA+SVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTA EELELS
Subjt: EHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELS
Query: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
EGIQDLLKLERLQEELA+RYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Subjt: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Query: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
Subjt: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
Query: PEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
PEAETAED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL+S
Subjt: PEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K917 RNA polymerase sigma factor | 5.0e-289 | 91.14 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFK T ANYSHHHSFLPTA S+YTKVRDPHSLRTQCILSAASPPTSTGT TT +VDRLKLPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEA+IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQSS K D LHFKWAQFMESERADIIGE +GVN RP++GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
ST ESD MEPTSEELELLQDELS++I V+S RQTERKARRTRAAEKT +SV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| A0A1S3CD00 RNA polymerase sigma factor | 2.9e-289 | 91.48 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFK T AN SHHHSF+PTA S+YTKVRDPHSLRTQCILSAASPPTSTGT TT NVDRLKLPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQ S K D LHFKWAQFMESERADIIGE +GVN RP++GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
ST ESD +EPTS+ELELLQDELS++I V+S RQTERKARRTRAAEKT +SVV KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAETAED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| A0A6J1DSR7 RNA polymerase sigma factor | 8.5e-297 | 93.02 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKTTAIT+TTTANYSHHH+FLPTANS+ TKVRDPHSLRTQCILSAASP TSTGT TTFNV+RLKLPP D NTDS+SAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSS+TG KSQSS K+D LHFKW QFMESERADIIG +GVNNRP +GDAL+
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
H TAESDY +PT+EELELLQDELS NIAVRS RQTER+A+RTRAAEK A+SVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAET+EDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| A0A6J1HL45 RNA polymerase sigma factor sigB | 1.7e-284 | 90.1 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT A TIT T SHHH+FLPTANSTY K RDPHSLRTQCILSAASPPT TGT TTFNVDRLKLPPFDTNTDSVSAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNSSR+ TKSQSS +++ LHFKW QFMESERADIIGE +GVNNRPV+GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
STAESD MEPTSEELELL+DE SK+IAVRS RQTERKARRTRA+EK A+SVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRSLEQK GINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
EA TAEDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
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| A0A6J1KM29 RNA polymerase sigma factor | 6.3e-284 | 90.44 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT AITIT T SHHH+FLPTANSTY KVRDPHSLRTQCILSAA TSTGT TTFNVDRLKLPPFDTNTDSVSAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
YLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNS+R+ TKSQSS K++ LHFKW QFMESERADIIGE +GVNNRPV+GDALE
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALE
Query: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
STAESD MEPTSEELELLQDE SK+IAVRSNRQTERKARRTRA+EK A+SVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt: HSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P DEEIA AAGLSMKRLA VLMTPKAPRSLEQK GINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
EA TAEDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Subjt: EAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 9.7e-189 | 63.44 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSY
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T+ +V +L+LP FDT++DS+ ++R +Y
Subjt: SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSY
Query: LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNR
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVAKDA L NSN++ T S + ++ KW QF E ERA I+G + V++
Subjt: LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNR
Query: PVDGDALEHSTAE----SDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
+ D + S + D EE+ELL+++ S ++AVRS RQTERKARR + EKTAS + S+K+GSS +KKR QEVD++DPLRYLR TTS+S+
Subjt: PVDGDALEHSTAE----SDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
Query: LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
LLT EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R++HGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Subjt: LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Query: GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL AVL++PK PRSL+QKIG+N
Subjt: GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
Query: QNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
QNLKPSEVI+DPEA T+ED+LIK+FM+QDL+KVLDSL RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Subjt: QNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| P26683 RNA polymerase sigma factor SigA | 1.7e-76 | 46.39 | Show/hide |
Query: KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKM
KSG +++ +R + + + D +R RLL A EE+EL+ I DLL+LER++E L+E+ +P ++WA A + R RL+ G KDKM
Subjt: KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKM
Query: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P
Subjt: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
Query: DEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
+EEIA +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLEKVLDSL+PRER V+R R+G++DGRMKTL+EIG+I
Subjt: DEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
Query: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
V+RERIRQIE+ A RKL++ R L++Y+
Subjt: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
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| P38023 RNA polymerase sigma factor SigA1 | 4.6e-74 | 45.71 | Show/hide |
Query: SSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIR
++ K + +++ D +R RLL A EE+EL+ I DLL LER+++EL E+ P+ A+WAAA R+RL G KDKM++SN+R
Subjt: SSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIR
Query: LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAE
LV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EEIA
Subjt: LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAE
Query: AAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRE
+++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLE VL +L+PRER V+R R+G++DGRMKTL+EIG++ V+RE
Subjt: AAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRE
Query: RIRQIESCAFRKLKNKKRTKHLQQYL
RIRQIE+ A RKL++ R L++Y+
Subjt: RIRQIESCAFRKLKNKKRTKHLQQYL
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| P52322 RNA polymerase sigma factor SigA | 3.8e-68 | 40.71 | Show/hide |
Query: SSRKKRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEE----------------------LAERYGNEPTFA----------
+S ++R++ ++ Y+ D +R RLL A EE+EL+ I DLLKLER++E+ + E+ EP +
Subjt: SSRKKRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEE----------------------LAERYGNEPTFA----------
Query: -------QWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
+W A + ++RL HG K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++D
Subjt: -------QWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Query: QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLE
QSRTIRLP H+ E R+K+ K L E R P +EEIA +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLE
Subjt: QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLE
Query: KVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
VLD+L+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A RKL++ R L++Y+
Subjt: KVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
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| P74565 RNA polymerase sigma factor SigA | 6.7e-65 | 39.24 | Show/hide |
Query: KRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFA------------------------------------
+++++++ Y+ D +R RLL A EE+EL+ I DLL+LE +++ L + +P+
Subjt: KRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFA------------------------------------
Query: --------QWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
+W+ N R+RL KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++
Subjt: --------QWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Query: DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDL
DQSRTIRLP H+ E R+K+ K L E R P +EEIAE +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DL
Subjt: DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDL
Query: EKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
E VLD+L+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A RKL++ R L++Y+
Subjt: EKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 6.9e-190 | 63.44 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSY
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T+ +V +L+LP FDT++DS+ ++R +Y
Subjt: SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSY
Query: LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNR
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVAKDA L NSN++ T S + ++ KW QF E ERA I+G + V++
Subjt: LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNR
Query: PVDGDALEHSTAE----SDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
+ D + S + D EE+ELL+++ S ++AVRS RQTERKARR + EKTAS + S+K+GSS +KKR QEVD++DPLRYLR TTS+S+
Subjt: PVDGDALEHSTAE----SDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
Query: LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
LLT EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R++HGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Subjt: LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Query: GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL AVL++PK PRSL+QKIG+N
Subjt: GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
Query: QNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
QNLKPSEVI+DPEA T+ED+LIK+FM+QDL+KVLDSL RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Subjt: QNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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| AT1G64860.1 sigma factor A | 2.1e-37 | 30.6 | Show/hide |
Query: DGDALEHSTAESDYMEPTSEELELLQD-------ELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRN-----SLQEVDYSDPLR-YLR
D + E + D + + E + LLQ LS AV S + R+ + T S + + + ++KK N ++ +V +R Y++
Subjt: DGDALEHSTAESDYMEPTSEELELLQD-------ELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRN-----SLQEVDYSDPLR-YLR
Query: ATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQE
S +L+ E + LS+ I+ L+L+ + L +R G EP+ Q A + +++ L+ L ++K+ SN+RLV+SIA+ Y G + DLVQ
Subjt: ATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQE
Query: GCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL
G GL+RG EKFD+SKGF+ STY +WWI+Q V ++L D SRT+RLP H+ E ++ A+ +L E G P + IAE+ +S K++ SL
Subjt: GCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL
Query: EQKIGINQNLKPSEV----ISDPEAET-----AEDLLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRK
++ + N P E I+D E +DL +K+++ K++ +L RE+++IR +G+ D T ++I + +G+SRER+RQ+ A K
Subjt: EQKIGINQNLKPSEV----ISDPEAET-----AEDLLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRK
Query: LKNKKRTKHLQQYLM
LK+ R + ++ ++
Subjt: LKNKKRTKHLQQYLM
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| AT2G36990.1 RNApolymerase sigma-subunit F | 3.1e-65 | 39.72 | Show/hide |
Query: KNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPT
K VRS RQ ER+A+ RA + +S KK+ Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT
Subjt: KNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPT
Query: FAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI
+WA A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RKS+ SRTI
Subjt: FAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI
Query: RLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDS
RLP ++ +V EARK E P EE+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+
Subjt: RLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDS
Query: LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
L+P+ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.2e-53 | 33.16 | Show/hide |
Query: SEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQ
S+ EL+ ++ + V S R+ ++KARR+ + SL G R N++ P +Y + SR E E+S G++ + +ER++
Subjt: SEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQ
Query: EELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA
+L E G + + WAAAAG+N++ L + L++G +C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+++GAE+FD ++G+KFSTY +WI+++
Subjt: EELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA
Query: VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIK
+ +S +R + +P ++ +++ARK L + +G ++ DEEIA+ G S+K++ A K S+++K+G K E D E+ E+ +++
Subjt: VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIK
Query: QFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
Q ++D+ +L+ L PRE+QV+ R+G++D R K+L+EIG+++ VS+E IR+IE A KL+++ + L+ YL
Subjt: QFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
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| AT5G13730.1 sigma factor 4 | 8.4e-47 | 35.97 | Show/hide |
Query: STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
S S L+ EE++L +++ KLE L + E NE A+ G +R+ + L ++K+ + RLV+SIA YQG G+NLQDL+QEG
Subjt: STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
GL+RGAE+FD +G+K STY +WWIKQA+ ++++ +SR ++LP M E T +V EA L + R P EEIAE L++ + + ++P SL++
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
Query: IGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
N + E++ P+ E+++ ++ MK ++E++L SL RE +V+ FG+ + +EIG+ + +SRER+RQI A +KL+N L+ Y
Subjt: IGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
Query: LMS
S
Subjt: LMS
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