; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008104 (gene) of Snake gourd v1 genome

Gene IDTan0008104
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG01:24794868..24795823
RNA-Seq ExpressionTan0008104
SyntenyTan0008104
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]9.3e-6249.28Show/hide
Query:  SVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILH--R
        S++EVWASN   EI +L+ CL++N ILSIDTEFPG IRSTPWGSID+ V          +++  +G  + D+SG +V  GS     S  +      +   
Subjt:  SVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILH--R

Query:  FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGL
         SF +QNGLDF K+KK GIP+ LFT     ++R++++ +WVTFHG        +A+G+ +ELPES++EF E+V+  +G VRDLK +AR+CEGLE G++GL
Subjt:  FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGL

Query:  QRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMPKFLNDY
        +RLG+LLG+KRFG KHHAGSDSLLTA +H KM   + L+S   DG+ YGL NKL   MK  + Q I+F Q+   L DY
Subjt:  QRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMPKFLNDY

KAG7027009.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5750Show/hide
Query:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI
        RG+   +REVWA NL  EI +LD CL S  ++SIDTEFPG I+ TPWG+ID+ +          ++V  +G    D+ G +      T   +  +  P I
Subjt:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI

Query:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL
          H      F KQNGLDF K+KKDGI ++ F     Y LRK+ + RW+TFHG         A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGL
Subjt:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL

Query:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK
        E G LGL++LGQLL QKRFG KHHAGSDSL+TA LH KM++ Y   +EICDG+ YGLS K
Subjt:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK

XP_022146113.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]1.6e-6148.35Show/hide
Query:  VREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI----LH
        +REVW+ N   E++ L+ CL    IL+IDTEFPGFIRSTPWG+I++ +          +++  +G  + D+ G +     ST   +  +  P I      
Subjt:  VREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI----LH

Query:  RFSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLG
          SF KQNGLDF+K+K+ GIP+  FT+   ++ RK++++RWVTFHG        +A+G+  E+PES++EF E+V  ALG V DLK+MA+FCEGLEDGKLG
Subjt:  RFSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLG

Query:  LQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMP
        L++L QL+ QKRFG KHHAGSDSLLTASL+ KM   + L SE+CDG+ YGL  KL    K ++YQN++F Q+P
Subjt:  LQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMP

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]3.0e-6050.39Show/hide
Query:  SVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILH--R
        S++EVWASN   EI +L+ CL++N ILSIDTEFPG IRSTPWGSID+ V          +++  +G  + D+SG   V GS     S  +      +   
Subjt:  SVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILH--R

Query:  FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGL
         +F +QNGLDF K+KK GIP+ LFT     ++R++++ +WVTFHG        +A+G+ +ELPES++EF E+V+  +G VRDLK +AR+CEGLE G++GL
Subjt:  FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGL

Query:  QRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKL
        +RLG+LLG+KRFG KHHAGSDSLLTA +H KM   + L+SE  DG+ YGL NKL
Subjt:  QRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKL

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]4.2e-6249.1Show/hide
Query:  VREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLN-----RTPTIL
        + +VWASN   EISKL+ CLE + I+SIDTEFPGFIR++PWGSID+ +          +++  +G  + D SG   + GS     S  +     ++P+  
Subjt:  VREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLN-----RTPTIL

Query:  HRFSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIE-IVSALGPVRDLKYMARFCEGLEDGKL
           SF +QNGLDF K+KK GIP+ LFT    +++RK+ + RWVTFHG        +A+G+ + LPE+++EF   +V  LG VRDLK+MARFCEGLEDGKL
Subjt:  HRFSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIE-IVSALGPVRDLKYMARFCEGLEDGKL

Query:  GLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCN-QMKEEMYQN--IIFAQMP
        GL+RLG+LL QKR+G KH+AGSDSLLTAS H +MI+ + + +EICDGY YG SNKL +  +   M+    I F Q+P
Subjt:  GLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCN-QMKEEMYQN--IIFAQMP

TrEMBL top hitse value%identityAlignment
A0A6J1CXP9 Poly(A)-specific ribonuclease7.7e-6248.35Show/hide
Query:  VREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI----LH
        +REVW+ N   E++ L+ CL    IL+IDTEFPGFIRSTPWG+I++ +          +++  +G  + D+ G +     ST   +  +  P I      
Subjt:  VREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI----LH

Query:  RFSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLG
          SF KQNGLDF+K+K+ GIP+  FT+   ++ RK++++RWVTFHG        +A+G+  E+PES++EF E+V  ALG V DLK+MA+FCEGLEDGKLG
Subjt:  RFSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLG

Query:  LQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMP
        L++L QL+ QKRFG KHHAGSDSLLTASL+ KM   + L SE+CDG+ YGL  KL    K ++YQN++F Q+P
Subjt:  LQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMP

A0A6J1G7L2 Poly(A)-specific ribonuclease1.4e-6050.39Show/hide
Query:  SVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILH--R
        S++EVWASN   EI +L+ CL++N ILSIDTEFPG IRSTPWGSID+ V          +++  +G  + D+SG   V GS     S  +      +   
Subjt:  SVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILH--R

Query:  FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGL
         +F +QNGLDF K+KK GIP+ LFT     ++R++++ +WVTFHG        +A+G+ +ELPES++EF E+V+  +G VRDLK +AR+CEGLE G++GL
Subjt:  FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGL

Query:  QRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKL
        +RLG+LLG+KRFG KHHAGSDSLLTA +H KM   + L+SE  DG+ YGL NKL
Subjt:  QRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNKL

A0A6J1G7T4 Poly(A)-specific ribonuclease1.5e-5750.38Show/hide
Query:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI
        RG+   +REVWA NL  EI +LD CL S  I+SIDTEFPG I+ TPWG+ D+ +          ++V  +G    D+SG +      T   +  +  P I
Subjt:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI

Query:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL
          H      F KQNGLDF K+KKDGI ++ F     Y L K+ + RWVTFHG         A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGL
Subjt:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL

Query:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK
        E G LGL++LGQLL QKRFG KHHAGSDSL+TA LH KM++ Y   +EICDG+ YGLS K
Subjt:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK

A0A6J1I4S7 Poly(A)-specific ribonuclease1.3e-5649.23Show/hide
Query:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI
        RG+   + EVWA NL DEI +LD CL    ++SIDTEFPG I+ TPWG+ID+ +          ++V  +G    D+SG +      T   +  +  P I
Subjt:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI

Query:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL
          H      F KQNGLDF K+KKDGI ++ F     Y +RK+ + +W+TFHG         A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGL
Subjt:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL

Query:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK
        E G LGL++LGQLL QKRFG KHHAGSDSL+TA LH KM++ Y   +EICDG+ YGLS K
Subjt:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK

A0A6J1I6H7 Poly(A)-specific ribonuclease9.7e-5749.23Show/hide
Query:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI
        RG+   + EVWA NL DEI +LD CL    ++SIDTEFPG I+ TPWG+ID+ +          ++V  +G    D+SG +      T   +  +  P I
Subjt:  RGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTI

Query:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL
          H      F KQNGLDF K+KKDGI ++ F     Y +RK+ + +W+TFHG         A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGL
Subjt:  -LHR---FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGF----IRHRAIGLVKELPESVQEFIEIVS-ALGPVRDLKYMARFCEGL

Query:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK
        E G LGL++LGQLL QKRFG KHHAGSDSL+TA LH KM++ Y   +EICDG+ YGLS K
Subjt:  EDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGLSNK

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 53.8e-2635.5Show/hide
Query:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQ--SGMLVVHGSSTSRTSTLNRTPTILHRFSF
        EVW  N   E++ +  CL+    ++IDTEFPG ++ TP  + D+I  R      + + +  +G   F +  +    ++ S  + + +L    +I    +F
Subjt:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQ--SGMLVVHGSSTSRTSTLNRTPTILHRFSF

Query:  TKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV-KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDGKLGLQR
         K NGLD +KI+++GI ++ F      +L  K+  +RWVTF G      +  GL  K LPE+ +EF E V  L    V D+K MA  C GL   + GLQR
Subjt:  TKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV-KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMI
        +  +L  +R G+ HHAGSDS LTA + TK+I
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMI

Q9C6M9 Putative CCR4-associated factor 1 homolog 44.2e-2533.9Show/hide
Query:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----
        EVW  N   E+  +  CL+    ++IDTEFPG ++ TP  + ++I  R      + + +  +GF  FD+ G+        ++T  +N +    H+     
Subjt:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----

Query:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLR-KNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG
           +F K NGL+ +KI ++GI ++ F      +L+ K+  + WV F G   +  +  GL   K LPE+ +EF E V  L    V D+K +A  C GL   
Subjt:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLR-KNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG

Query:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM
        + GLQR+  +L  KR G+ HHAGSDS LTA + TK+
Subjt:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 83.7e-2132.6Show/hide
Query:  ISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHRFSFTKQNGLDF
        +S ++ CL S   ++IDTEFP  +R T   + D+      S   + +++  +G   FD +G +     ++ S        N          F ++NGLD 
Subjt:  ISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHRFSFTKQNGLDF

Query:  EKIKKDGIPMKLFTTCIHYVLRKNKM-LRWVTFHGF--IRHRAIGLVKE-LPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKR
         KI+++GI ++ F + + ++L+K +  + WVTFHG   I +   G   E LP + + F + V+  LG V DLK MA  CEGL   +LGL+ L    G  R
Subjt:  EKIKKDGIPMKLFTTCIHYVLRKNKM-LRWVTFHGF--IRHRAIGLVKE-LPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKR

Query:  FGRKHHAGSDSLLTASLHTKMIESYGL
         G  HHAGS++ LTA +  K++  + L
Subjt:  FGRKHHAGSDSLLTASLHTKMIESYGL

Q9SFX6 Putative CCR4-associated factor 1 homolog 35.5e-2533.9Show/hide
Query:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----
        EVW  N   E++ +  CL+    ++IDTEFPG ++ TP  + ++I  R      + + +  +GF  FD+ G         ++T  +N +    H+     
Subjt:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----

Query:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG
           +F K NGL+ +KI+++GI +  F      +L  K+  + WV F G   +  +  GL   K LPE+ +EF E V  L    V D+K +A  C GL   
Subjt:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG

Query:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM
        + GLQR+  +L  KR G+ HHAGSDS LTA + TK+
Subjt:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.1e-2534.77Show/hide
Query:  REVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHR
        R VW SN+ +E++++  CL+   +++ DTE+PG I  T + S      R      E +++   GF  F+  G +     ++ S+    S      +I   
Subjt:  REVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHR

Query:  FSFTKQNGLDFEKIKKDGIPM-------KLFTTCIHYVLRKNKMLRWVTFHG---FIRHRAIGLVKELPESVQEF-IEIVSALGPVRDLKYMARFCEGLE
          F +++GLD +KI+ +G+ M       KL T     V R  K + +VTF G   F    +I    +LPE+  EF  E+V   G V D K MA FCEGL 
Subjt:  FSFTKQNGLDFEKIKKDGIPM-------KLFTTCIHYVLRKNKMLRWVTFHG---FIRHRAIGLVKELPESVQEF-IEIVSALGPVRDLKYMARFCEGLE

Query:  DGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGL
        +  LGL +L QLL   R GR HHAGSDSL+TA +  K+   Y   S    G  YG+
Subjt:  DGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.9e-2734.77Show/hide
Query:  REVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHR
        R VW SN+ +E++++  CL+   +++ DTE+PG I  T + S      R      E +++   GF  F+  G +     ++ S+    S      +I   
Subjt:  REVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHR

Query:  FSFTKQNGLDFEKIKKDGIPM-------KLFTTCIHYVLRKNKMLRWVTFHG---FIRHRAIGLVKELPESVQEF-IEIVSALGPVRDLKYMARFCEGLE
          F +++GLD +KI+ +G+ M       KL T     V R  K + +VTF G   F    +I    +LPE+  EF  E+V   G V D K MA FCEGL 
Subjt:  FSFTKQNGLDFEKIKKDGIPM-------KLFTTCIHYVLRKNKMLRWVTFHG---FIRHRAIGLVKELPESVQEF-IEIVSALGPVRDLKYMARFCEGLE

Query:  DGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGL
        +  LGL +L QLL   R GR HHAGSDSL+TA +  K+   Y   S    G  YG+
Subjt:  DGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIESYGLKSEICDGYFYGL

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-2633.9Show/hide
Query:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----
        EVW  N   E++ +  CL+    ++IDTEFPG ++ TP  + ++I  R      + + +  +GF  FD+ G         ++T  +N +    H+     
Subjt:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----

Query:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG
           +F K NGL+ +KI+++GI +  F      +L  K+  + WV F G   +  +  GL   K LPE+ +EF E V  L    V D+K +A  C GL   
Subjt:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG

Query:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM
        + GLQR+  +L  KR G+ HHAGSDS LTA + TK+
Subjt:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-2633.9Show/hide
Query:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----
        EVW  N   E+  +  CL+    ++IDTEFPG ++ TP  + ++I  R      + + +  +GF  FD+ G+        ++T  +N +    H+     
Subjt:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHR-----

Query:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLR-KNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG
           +F K NGL+ +KI ++GI ++ F      +L+ K+  + WV F G   +  +  GL   K LPE+ +EF E V  L    V D+K +A  C GL   
Subjt:  --FSFTKQNGLDFEKIKKDGIPMKLFTTCIHYVLR-KNKMLRWVTFHGFIRHRAI--GLV--KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDG

Query:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM
        + GLQR+  +L  KR G+ HHAGSDS LTA + TK+
Subjt:  KLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-2735.5Show/hide
Query:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQ--SGMLVVHGSSTSRTSTLNRTPTILHRFSF
        EVW  N   E++ +  CL+    ++IDTEFPG ++ TP  + D+I  R      + + +  +G   F +  +    ++ S  + + +L    +I    +F
Subjt:  EVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQ--SGMLVVHGSSTSRTSTLNRTPTILHRFSF

Query:  TKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV-KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDGKLGLQR
         K NGLD +KI+++GI ++ F      +L  K+  +RWVTF G      +  GL  K LPE+ +EF E V  L    V D+K MA  C GL   + GLQR
Subjt:  TKQNGLDFEKIKKDGIPMKLFTTCIHYVL-RKNKMLRWVTFHGFIRHRAI--GLV-KELPESVQEFIEIVSAL--GPVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMI
        +  +L  +R G+ HHAGSDS LTA + TK+I
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMI

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-2232.6Show/hide
Query:  ISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHRFSFTKQNGLDF
        +S ++ CL S   ++IDTEFP  +R T   + D+      S   + +++  +G   FD +G +     ++ S        N          F ++NGLD 
Subjt:  ISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGML----VVHGSSTSRTSTLNRTPTILHRFSFTKQNGLDF

Query:  EKIKKDGIPMKLFTTCIHYVLRKNKM-LRWVTFHGF--IRHRAIGLVKE-LPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKR
         KI+++GI ++ F + + ++L+K +  + WVTFHG   I +   G   E LP + + F + V+  LG V DLK MA  CEGL   +LGL+ L    G  R
Subjt:  EKIKKDGIPMKLFTTCIHYVLRKNKM-LRWVTFHGF--IRHRAIGLVKE-LPESVQEFIEIVS-ALGPVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKR

Query:  FGRKHHAGSDSLLTASLHTKMIESYGL
         G  HHAGS++ LTA +  K++  + L
Subjt:  FGRKHHAGSDSLLTASLHTKMIESYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAGGAGAGTGTTTTTCTGTTCGAGAGGTTTGGGCTTCAAATTTACATGATGAAATCTCGAAACTGGATGCGTGTCTTGAATCCAACTGCATTTTGTCAATCGA
CACAGAATTTCCAGGGTTTATTAGGAGCACCCCATGGGGCTCCATTGATAAAATAGTATCACGAAGATCTTCGATTCAATGTGAACCAAGCGAAGTTGATTCAATTGGGT
TTAACAGTTTCGATCAATCGGGAATGTTGGTGGTTCATGGGAGTTCAACTTCTCGGACTTCGACCTTGAATCGGACGCCCACAATCCTTCATCGATTTTCGTTTACGAAG
CAGAATGGGCTTGATTTTGAGAAAATAAAGAAAGATGGAATCCCTATGAAACTATTCACTACGTGCATCCATTATGTGTTGAGAAAGAATAAGATGTTGAGATGGGTCAC
ATTTCATGGATTTATACGACATCGGGCGATTGGGTTAGTGAAGGAGTTGCCGGAATCAGTGCAAGAATTTATAGAGATAGTGAGTGCATTGGGGCCTGTGAGGGATTTGA
AGTACATGGCTCGGTTTTGTGAAGGATTGGAAGATGGGAAACTTGGACTTCAAAGATTGGGTCAATTATTAGGCCAAAAGCGCTTTGGAAGAAAGCATCATGCTGGTTCT
GACAGCTTGTTAACTGCTTCTTTACATACAAAGATGATAGAGTCTTATGGTTTGAAATCAGAAATTTGTGATGGATATTTCTATGGCCTCTCCAACAAACTCTGCAACCA
AATGAAAGAGGAAATGTATCAGAACATCATCTTTGCCCAAATGCCCAAATTTCTGAATGATTATTGGTTGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGAGGAGAGTGTTTTTCTGTTCGAGAGGTTTGGGCTTCAAATTTACATGATGAAATCTCGAAACTGGATGCGTGTCTTGAATCCAACTGCATTTTGTCAATCGA
CACAGAATTTCCAGGGTTTATTAGGAGCACCCCATGGGGCTCCATTGATAAAATAGTATCACGAAGATCTTCGATTCAATGTGAACCAAGCGAAGTTGATTCAATTGGGT
TTAACAGTTTCGATCAATCGGGAATGTTGGTGGTTCATGGGAGTTCAACTTCTCGGACTTCGACCTTGAATCGGACGCCCACAATCCTTCATCGATTTTCGTTTACGAAG
CAGAATGGGCTTGATTTTGAGAAAATAAAGAAAGATGGAATCCCTATGAAACTATTCACTACGTGCATCCATTATGTGTTGAGAAAGAATAAGATGTTGAGATGGGTCAC
ATTTCATGGATTTATACGACATCGGGCGATTGGGTTAGTGAAGGAGTTGCCGGAATCAGTGCAAGAATTTATAGAGATAGTGAGTGCATTGGGGCCTGTGAGGGATTTGA
AGTACATGGCTCGGTTTTGTGAAGGATTGGAAGATGGGAAACTTGGACTTCAAAGATTGGGTCAATTATTAGGCCAAAAGCGCTTTGGAAGAAAGCATCATGCTGGTTCT
GACAGCTTGTTAACTGCTTCTTTACATACAAAGATGATAGAGTCTTATGGTTTGAAATCAGAAATTTGTGATGGATATTTCTATGGCCTCTCCAACAAACTCTGCAACCA
AATGAAAGAGGAAATGTATCAGAACATCATCTTTGCCCAAATGCCCAAATTTCTGAATGATTATTGGTTGTGTTGA
Protein sequenceShow/hide protein sequence
MDRGECFSVREVWASNLHDEISKLDACLESNCILSIDTEFPGFIRSTPWGSIDKIVSRRSSIQCEPSEVDSIGFNSFDQSGMLVVHGSSTSRTSTLNRTPTILHRFSFTK
QNGLDFEKIKKDGIPMKLFTTCIHYVLRKNKMLRWVTFHGFIRHRAIGLVKELPESVQEFIEIVSALGPVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKRFGRKHHAGS
DSLLTASLHTKMIESYGLKSEICDGYFYGLSNKLCNQMKEEMYQNIIFAQMPKFLNDYWLC