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Tan0008105 (gene) of Snake gourd v1 genome

Gene IDTan0008105
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:65084497..65085000
RNA-Seq ExpressionTan0008105
SyntenyTan0008105
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3067.48Show/hide
Query:  MVRFLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILG
        M  FLFLLFIFA+ALL+S AV         AEPPS RKLG H S A VSSSP+EAP+SE+KV                LENREHHKSRDMSIAGGGVILG
Subjt:  MVRFLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILG

Query:  GLATTFLVAIICYIRATRRQNSE
        GLATTF VAIICYIRAT+RQNSE
Subjt:  GLATTFLVAIICYIRATRRQNSE

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]3.7e-3979.34Show/hide
Query:  MVRFLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILG
        M  FLFLLFIFANALL SVAVGAAPPP   AEPPSGRKLGKH STAVV SSP+EAPRSE KV   S A+ G +GNEI+LEN EHHKS D S+AGGGVILG
Subjt:  MVRFLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILG

Query:  GLATTFLVAIICYIRATRRQN
        GLATTFLVAI+CYIRATRRQ+
Subjt:  GLATTFLVAIICYIRATRRQN

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]2.2e-3977.5Show/hide
Query:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA
        FLFLLFIFANAL +S+A  AAPPP   AE PS RKLGKH+STA+  SSPTEAPRS MKVQ  S ASGGESGN ++L N +HHKSRD SIAGGGVILGGLA
Subjt:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA

Query:  TTFLVAIICYIRATRRQNSE
        TTFLVA+ICYIRATRRQ SE
Subjt:  TTFLVAIICYIRATRRQNSE

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]7.5e-4079.17Show/hide
Query:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA
        FLFLLFIFANA  +S+A  AAPPP   AE PS RKLGKH+STA+  SSP EAPRSEMKVQ  SAASGGESGN +QL N +HHKSRD SIAGGGVILGGLA
Subjt:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA

Query:  TTFLVAIICYIRATRRQNSE
        TTFLVAIICYIRATRRQ SE
Subjt:  TTFLVAIICYIRATRRQNSE

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]1.3e-3170.99Show/hide
Query:  MVRFLFLLFIFANALLNSVAV-----GAAPPPM-IGAEPPSGRKLGKHRSTAVVS--SSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSI
        M RFLF+LFIFANA LNSV V     GAAP P+  GAE PS RKLGKHRS A VS  SSP+EAPRSEMKVQA SAA+   +G + Q  N   HK+ D SI
Subjt:  MVRFLFLLFIFANALLNSVAV-----GAAPPPM-IGAEPPSGRKLGKHRSTAVVS--SSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSI

Query:  AGGGVILGGLATTFLVAIICYIRATRRQNSE
        AGGGVILGGLATTFLVAIICYIRATRR NSE
Subjt:  AGGGVILGGLATTFLVAIICYIRATRRQNSE

TrEMBL top hitse value%identityAlignment
A0A0A0KXQ0 Uncharacterized protein1.1e-3977.5Show/hide
Query:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA
        FLFLLFIFANAL +S+A  AAPPP   AE PS RKLGKH+STA+  SSPTEAPRS MKVQ  S ASGGESGN ++L N +HHKSRD SIAGGGVILGGLA
Subjt:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA

Query:  TTFLVAIICYIRATRRQNSE
        TTFLVA+ICYIRATRRQ SE
Subjt:  TTFLVAIICYIRATRRQNSE

A0A1S3BJV8 uncharacterized protein LOC1034906753.6e-4079.17Show/hide
Query:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA
        FLFLLFIFANA  +S+A  AAPPP   AE PS RKLGKH+STA+  SSP EAPRSEMKVQ  SAASGGESGN +QL N +HHKSRD SIAGGGVILGGLA
Subjt:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA

Query:  TTFLVAIICYIRATRRQNSE
        TTFLVAIICYIRATRRQ SE
Subjt:  TTFLVAIICYIRATRRQNSE

A0A5A7TSM2 Uncharacterized protein3.6e-4079.17Show/hide
Query:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA
        FLFLLFIFANA  +S+A  AAPPP   AE PS RKLGKH+STA+  SSP EAPRSEMKVQ  SAASGGESGN +QL N +HHKSRD SIAGGGVILGGLA
Subjt:  FLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLA

Query:  TTFLVAIICYIRATRRQNSE
        TTFLVAIICYIRATRRQ SE
Subjt:  TTFLVAIICYIRATRRQNSE

A0A5D2BCQ1 Uncharacterized protein2.6e-1442.86Show/hide
Query:  MVRFLFLLFIFANALLNSVAVGAAPPPMIG----AEPPSGRKLGKHRSTAVV----SSSPTEAPRSEMKV-------QADSAASGGE---------SGNE
        M + L L     NA +   A G AP P  G    AE P+ RKLGKH+         +SSP++AP ++  +        AD  A+  E          G  
Subjt:  MVRFLFLLFIFANALLNSVAVGAAPPPMIG----AEPPSGRKLGKHRSTAVV----SSSPTEAPRSEMKV-------QADSAASGGE---------SGNE

Query:  IQLENREHHKSRDMSIAGGGVILGGLATTFLVAIICYIRATRRQNSE
        I L+N  HH S D S+AGGGVILGGLATTFLVA+ CYIRAT R   E
Subjt:  IQLENREHHKSRDMSIAGGGVILGGLATTFLVAIICYIRATRRQNSE

A0A6J1DCH7 uncharacterized protein LOC1110194726.2e-3270.99Show/hide
Query:  MVRFLFLLFIFANALLNSVAV-----GAAPPPM-IGAEPPSGRKLGKHRSTAVVS--SSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSI
        M RFLF+LFIFANA LNSV V     GAAP P+  GAE PS RKLGKHRS A VS  SSP+EAPRSEMKVQA SAA+   +G + Q  N   HK+ D SI
Subjt:  MVRFLFLLFIFANALLNSVAV-----GAAPPPM-IGAEPPSGRKLGKHRSTAVVS--SSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSI

Query:  AGGGVILGGLATTFLVAIICYIRATRRQNSE
        AGGGVILGGLATTFLVAIICYIRATRR NSE
Subjt:  AGGGVILGGLATTFLVAIICYIRATRRQNSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.0e-1046.07Show/hide
Query:  AEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLATTFLVAIICYIRATRR
        AEPP+ RKLG+H           E P  E       A +   S  E  +    HH + + S+AGGGVILGGLATTFLV + CYIRATR+
Subjt:  AEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLATTFLVAIICYIRATRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGATTTCTATTCCTTCTCTTCATCTTCGCCAATGCTCTTCTCAATTCAGTCGCCGTCGGAGCCGCTCCGCCGCCGATGATCGGAGCCGAACCGCCTTCCGGAAG
GAAGCTCGGGAAGCACCGGAGTACGGCGGTTGTTTCTTCAAGCCCGACTGAAGCGCCGCGTAGCGAAATGAAAGTCCAGGCGGACTCGGCGGCGAGCGGCGGAGAGAGTG
GGAATGAGATTCAATTGGAGAATCGTGAGCATCATAAGTCGAGAGATATGTCTATTGCCGGCGGCGGTGTCATATTGGGCGGACTCGCCACCACTTTTCTGGTGGCGATT
ATTTGTTACATTAGAGCTACGAGGCGACAGAACTCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
GCAGCTCCAAAGACATGGTTCGATTTCTATTCCTTCTCTTCATCTTCGCCAATGCTCTTCTCAATTCAGTCGCCGTCGGAGCCGCTCCGCCGCCGATGATCGGAGCCGAA
CCGCCTTCCGGAAGGAAGCTCGGGAAGCACCGGAGTACGGCGGTTGTTTCTTCAAGCCCGACTGAAGCGCCGCGTAGCGAAATGAAAGTCCAGGCGGACTCGGCGGCGAG
CGGCGGAGAGAGTGGGAATGAGATTCAATTGGAGAATCGTGAGCATCATAAGTCGAGAGATATGTCTATTGCCGGCGGCGGTGTCATATTGGGCGGACTCGCCACCACTT
TTCTGGTGGCGATTATTTGTTACATTAGAGCTACGAGGCGACAGAACTCAGAGTGAAGTGAGCTTTCGAAACGACATGTCGTCCGTGTGGTTTGTAAGCTTGTAATTGTA
ATTTTTTCTTAATGGAGGTTGTAATTGTAATTAATCATAAGTATAAAGGTGAAAGGATTAAAAA
Protein sequenceShow/hide protein sequence
MVRFLFLLFIFANALLNSVAVGAAPPPMIGAEPPSGRKLGKHRSTAVVSSSPTEAPRSEMKVQADSAASGGESGNEIQLENREHHKSRDMSIAGGGVILGGLATTFLVAI
ICYIRATRRQNSE