; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008111 (gene) of Snake gourd v1 genome

Gene IDTan0008111
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationLG04:55590749..55594988
RNA-Seq ExpressionTan0008111
SyntenyTan0008111
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN60902.1 hypothetical protein VITISV_023048 [Vitis vinifera]1.7e-2949.39Show/hide
Query:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        ++E SALV     + K      K++E+PRVWCD+CNKPRHT E CWK+HG   N K     P+    R++           +AN A+++PF+ EQ++ LL
Subjt:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALSC-LNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK N +SG  SVSLA TG    ALSC   S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALSC-LNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

KAG6468480.1 hypothetical protein ZIOFF_073168 [Zingiber officinale]7.2e-3351.41Show/hide
Query:  MIDKK-VIDSVESSALVVKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFS
        M++K+   +SVE+SAL          N   + ++KPRVWCD+CNKPRHTRETCWK+HG   N K++K G               N+   +AN AD+ PF+
Subjt:  MIDKK-VIDSVESSALVVKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFS

Query:  KEQVDQLLKLLKVNSSSGNPSVSLAQTGTCP------QALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI
        K+Q+DQLLKL+K N SS  PSVSLAQT + P      +ALSCLNSS WIID GA DHM+S S LF++YSP   NEKI
Subjt:  KEQVDQLLKLLKVNSSSGNPSVSLAQTGTCP------QALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

KAG6510170.1 hypothetical protein ZIOFF_028179 [Zingiber officinale]2.2e-2951.52Show/hide
Query:  THKASNQAPKNNEKPR---------VWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLK
        +H      PK+ EK           V CD+CNKPRHTRETCWK++G   N K++K G               N+    AN ADS  F+KEQ+DQLLKL+K
Subjt:  THKASNQAPKNNEKPR---------VWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLK

Query:  VNSSSGNPSVSLAQTGTCP------QALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         N SS  PSVSLAQ G+ P      +ALSCLNSSPWIIDSGA+DHM+S S LF++YSP   NEKI
Subjt:  VNSSSGNPSVSLAQTGTCP------QALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

RVW50129.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.8e-2951.53Show/hide
Query:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        ++E SALV     + KA+    K++E+PRVWCD+CNKPRHTRE CWK+HG   N K    G T            G     +AN A+++PF+ EQ++ LL
Subjt:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEK
         LLK N +SG  SVSLA TG    ALS C  S+PWIIDSGASDHMT+SS +FESYSP   N+K
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEK

RVX14577.1 hypothetical protein CK203_012112 [Vitis vinifera]9.7e-3051.22Show/hide
Query:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        ++E SALV     + KA+    K++E+PRVWCD+CNKPRHTRE CWK+HG   N K    G T            G     +AN A+++PF+ EQ++ LL
Subjt:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK N +SG  SVSLA TG    ALS C  S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

TrEMBL top hitse value%identityAlignment
A0A2N9EE05 Uncharacterized protein2.2e-3559.39Show/hide
Query:  SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        +VESSALV   A + KA     + ++KPRVWCDYCNKP HTRETCWK+HG   N KS+K G     DRS        Q+  +AN A+   F+KEQ++ LL
Subjt:  SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK NSSSG PSVS+AQTG  P ALS CLNSS PWIIDSGASDHMTSS   FESYSP    EK+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI

A0A2N9GQ49 Uncharacterized protein2.2e-3558.79Show/hide
Query:  SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        +VESSALV   A + KA     + ++KP+VWCDYCNKPRHTRETCWK+HG   N KS+K G     DRS        ++  +AN A+   F+KEQ++ LL
Subjt:  SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK NSSSG PSVS+AQTG  P ALS CLNSS PWIIDSGASDHMTSS   FESYSP    EK+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI

A0A2N9I543 Uncharacterized protein7.5e-3659.39Show/hide
Query:  SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        +VESSALV   A + KA     + ++KPRVWCDYCNKPRHTRETCWK+HG   N KS+K G     DRS        ++  +AN A+   F+KEQ++ LL
Subjt:  SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK NSSSG PSVS+AQTG  P ALS CLNSS PWIIDSGASDHMTSS   FESYSP    EK+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI

A0A438K044 Uncharacterized protein4.7e-3051.22Show/hide
Query:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        ++E SALV     + KA+    K++E+PRVWCD+CNKPRHTRE CWK+HG   N K    G T            G     +AN A+++PF+ EQ++ LL
Subjt:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK N +SG  SVSLA TG    ALS C  S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

A5B3M7 Reverse transcriptase Ty1/copia-type domain-containing protein8.0e-3049.39Show/hide
Query:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL
        ++E SALV     + K      K++E+PRVWCD+CNKPRHT E CWK+HG   N K     P+    R++           +AN A+++PF+ EQ++ LL
Subjt:  SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLL

Query:  KLLKVNSSSGNPSVSLAQTGTCPQALSC-LNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI
         LLK N +SG  SVSLA TG    ALSC   S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Subjt:  KLLKVNSSSGNPSVSLAQTGTCPQALSC-LNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGACAAGAAAGTCATTGATTCAGTTGAAAGTTCGGCTCTAGTAGTTAAAGCTACAACACATAAGGCATCAAATCAGGCACCCAAAAATAATGAAAAGCCTCGAGT
CTGGTGTGATTACTGCAACAAGCCTCGACATACTCGTGAAACATGCTGGAAACTTCACGGAAACTCCATTAATCGGAAGAGTAATAAGCATGGCCCCACTTCATCTGATG
ACAGGAGTGTAAATCAACACTCATCTGGTAATCAATCATCATTCTCTGCTAATATTGCTGATTCTAATCCATTTAGCAAGGAGCAAGTCGATCAACTCCTGAAGCTGTTA
AAGGTCAATTCATCATCGGGTAATCCCAGTGTTTCCTTGGCACAAACAGGTACTTGTCCTCAAGCCCTTTCTTGTCTTAACTCCTCCCCATGGATCATAGATTCCGGGGC
TTCTGATCACATGACCAGTTCCTCAAAATTATTTGAATCATACTCTCCGATGTACTGTAATGAAAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
GCTAAAAAAAAAAAGGGAAATTTTTCGTTAAACCTCTCGTTCTCTTTCTCAAACACCCAGGAGCTTCTTTCTTTCGTGTAGAACCATCTTCTTCTTCTCATTCGCCCATC
TTCTTCTCCTTCCTTCGCCCATCTTCTTCTTCTCATGCCAACATCGACAGCGACACTGCACATTTCTTACAATAGTCGACCAACAAGTGCATATCATCTGTTTGTTTCGC
AGTTCACACGTCTTCTTCAACCTCACGCCAATGTTTCTTGCAACGATGTGGGGGGTGACGTGCGAAGGATCCCTTGCGCTGACCTGTAGCAGCAACGGGTTCAACCTTTG
TGCTGGCTGTCAACGTCGTCTCCTGTTCCAGGTGCATAAATGATAAATCCACACAATTTGGAGTCTCGAATAATTTCAATTCAGTGACTCACACTAAGGTTAGTCTTAAA
TTTGATAGGTGTGTTACTGAACCTTGTTAACTTTTGGAGATTTGACATTTCAGATCAATTTTAGAAACCTGAACTCCTACAAAATTAGGTCATCCATTTCGTTTTTTTGT
AGAATAGATTAATTGATTATATCTGATCGTAGGTTTCTTTTGGTCCTAGATCGAATTAAGACATTTCATTTGACTAAATGATAGATTGAATATGTTTGAGAAAACTTCAG
AAAATTCATTGAAACGTAGTAAAACAGAGTTTTAATTTTTTTTATTTATCTTTGTTGTTTTTTATTCCTTTTTTGCATTCAAAGTGTGATGTTGTTTATGTTCTGCTTTT
TTTTTCTTATGTTTAGTTCTGAACTGTTATATTTAGATTGTTTATTCTTTTACCTTTTGTATTTGTATTTAGTTGTTGAATCTAGTTGCATAGGTGAAATAGAGAGTTGT
TATGGTTGTTGGACTGTTTAGGAGCACAAGGTGTAATTTAGGTGCAAGTATTGATTATGTGGTTTAGGTACAACTGCACAAGTATGTAATAGATTGGTTGAAAGCTTTGG
TTGAAAGCTTACCATTTAAAAGGTAATGACTGAGTACATCTATGAATTTGGCAGATTGATATGAGTACCTTTTTCTTCTTCTTCAATAGATAACTCTCATGGTTGTTAAG
CTCATCAAATTAAGTTGGAGAGAATGTATGAGATAGTTTTTGGTTGGTCTTTGTTGTTTCTTTGATTGTTTTTGTTGGTTATTCTCTTTATTTATTAATAAGGAAATATT
GGCTATTCCCTTATTTGTCAATAAATATTTCATTGTATTTGCCATATTGTAGATGCTGGAATTTTATTTCCTTGTATGTAAATATAGGTTTCTTCTATATAAGAAATCTT
GTACCTTCATTGTGAAATATAGAAAATATTTCTACTCTCATTATTTTCTACATGGTATCAGAGCAGAAACCCTAAATCTGTTCAAAGAAAAACCCTAATTCCCTTTTTGT
TCAAAACCCTAAATCGGCTGCAACACCCATTACCAGTCTCTCACGACCAGCAAACTCACGACATCTTCAACCTTCCTTTCGTTTTCTGGAAAGGAACCCATAAACTTCCT
TTCGTTTTCTGGAAAGAACCCACGAGCAACAAACCCACAAAAATACCCACGAACCTGAGAAGACCCAGACCCGACCCGCGAAGCATACCCACGAATCCAGCGGCTTTGTC
TGCGACTCTTAACCCGCGAAGCATACCCACGAATCCGCGAAGCATACCCGCGAACTAACCAGGTTGGTCGGCTTTGTCTGCCGTCGGACCCGTAAACTAACCCAGCGGAT
TTTTCTTGACCCACTACCGTTGGTCTCCGCCGCGAACTAACCGGAGTTTGTCGGTCTCCGCCGCTGGACTCATACGTTTGTTGTTTCTCTACATCTTTACTTATAGTTTT
CTTTTTTATCAAAGGGAGTTTCTGTTTTTTGCTTTGTTTGTTGTTACTGTGTGGTGTTCTCCAACAGAATGTCAAACAATAAGTTGTTGCCCATTGTAAAAACCTCAGAT
AGTCGGATCCACTCCAACAGTCTTGTTGTCCAAATTACAACCATTCGACTTAATGGCGATAACTTCCTTCGTTGGTCGCAAAGTGTTCGAATGTACATCCGAGGACAAGG
GAAGATTGGATACCTTACTGGAGAGAAATCCATGCCTGCAGAAGACGATCCTTCGTTCACTGTATGGGATGCTGAAAACTCCATGGTGATGACCTGGTTAGTAAATTCCA
TGGTAGAAGAAATAAGTTCTAACTATATGTGCTACTCTACTGCTAAGGAATTGTGGGAGAATGTGACTCAGATGTATTCTGACCTGGGAAATCAATCACAAGTGTTTGAA
CTCAATCTTAAAGCTGGGTGATATACGACGGAAATAATTACTCACACACAAGACTTTCATTTGTTAAAACGAATTTGGCAGGACTTGGATTTATTTGATACGTATGAGTG
GAAGTCAACTGATGATCAAAGGCACTACAGGAAAGTTGTGGAAGACGGGCGGATTTATAAATTCCTCGCAGGGCTCAACGTTGAATTCGATGAGGTTAGAGGACGAATAC
TGGGAAAAACTGTACTCCCAAATATTAATGATGTGTTTTCTGAAGTTCGCAGGGAAGAGAGTCGTAGAAGTGATATGATCGACAAGAAAGTCATTGATTCAGTTGAAAGT
TCGGCTCTAGTAGTTAAAGCTACAACACATAAGGCATCAAATCAGGCACCCAAAAATAATGAAAAGCCTCGAGTCTGGTGTGATTACTGCAACAAGCCTCGACATACTCG
TGAAACATGCTGGAAACTTCACGGAAACTCCATTAATCGGAAGAGTAATAAGCATGGCCCCACTTCATCTGATGACAGGAGTGTAAATCAACACTCATCTGGTAATCAAT
CATCATTCTCTGCTAATATTGCTGATTCTAATCCATTTAGCAAGGAGCAAGTCGATCAACTCCTGAAGCTGTTAAAGGTCAATTCATCATCGGGTAATCCCAGTGTTTCC
TTGGCACAAACAGGTACTTGTCCTCAAGCCCTTTCTTGTCTTAACTCCTCCCCATGGATCATAGATTCCGGGGCTTCTGATCACATGACCAGTTCCTCAAAATTATTTGA
ATCATACTCTCCGATGTACTGTAATGAAAAAATTTGAATTGCAGACGGTAGTTTTAATTCCATTGCAGGAAAAGGAACTATTAGACTATCCTAAAAAATTAATCTATATT
CTGTATTGCATGTTGCAAAACTAGAATGTAATTTGTTATCTGTCAGTAAAATATCTAAGGATGCTAATTGTCGTGTCACCTTCTGTGATTCCCATTGTGTTTTTCCGGAT
CAGGGATCGGGGGAGATGATTGGGCGTGCTAGAATGCTTGAAGGTCTCTACTATTTTGAGGAACCCTCGACTAGTCATAAAACAGTTCGAGGCTTGAGTAGTGTTAGTTC
TTCCCCTGTTAAAGAAACTATAATGCTTTGGCATCGTAGATTAGAGCATCCCAGTTTTTTCTATTTAAAGTATTTGTTTCCATATTTAAAGGTATTGATTGCTCCATTTT
TCAGTGTGAAAGCTGTATTTTTGCAAAAAATCACAGATCAACTTATTCACCCAACTCTTACAAAGCATCTACTCCTTTTTACCTAATTCATAGTGATGTTTGGGGACCTT
CAAAAGTTTTAACTCATAGTGAAAAACGGTGGTTTGTTAATTTTATTGATGACCATACTAGGTTAACCTGGATTTATTTGCTTAAAAACAAGTCAGATGTGAAAGATATT
TTTATCCAGTTTTATAACATGATTGAAACTCATTCCAAACTAAAATTAGCATTTTGCATTCTGATAATGGAAAAGAGTATTTCAATGAATATTTAAATGAATTCTTTAAA
GTCAAAGGTATTTTTCACCAATCGACGTGTCGTGACACTCCCCAACAAAATGGCATTGCTGAAAGGAAAAATAGACACTTACTTGATGTTGCTCGTGCACTTATGTTTTC
TATGCATGTTCCTAATTATTTGTGGGGAGAAGCTATTCTTACGGCAGCGTATCTTATTAATCGAATGCCTTCAAAAAATTTGGATTTTAAGACACCCCTAGATCATTTTA
AAACTTTTTTTTCCCTCCGTTCGCTTATTTTCTGATTTGCCTATCAAGGTTTTTGGGTGTACAACATATGTTCACCTTCCTAACATTTGTCGGTCTAAACTTGAGCCTAG
GGCTTCTAAATGTATTTTAAGTGGATATGTTTCAAACAAGAAAGCATATAAATGTTTTTA
Protein sequenceShow/hide protein sequence
MIDKKVIDSVESSALVVKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLL
KVNSSSGNPSVSLAQTGTCPQALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI