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Tan0008113 (gene) of Snake gourd v1 genome

Gene IDTan0008113
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:63430713..63431394
RNA-Seq ExpressionTan0008113
SyntenyTan0008113
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]5.5e-0536.36Show/hide
Query:  MVHSSNT-----ADATAAMVVLILMLSASNCKAASLVLPPNFVNATVAPAAPMWCHGPLDECLAVEEN--------------FFSFNIGVRTGKNDSSIC
        M HSSN+     A A AAM V ILMLS S+C  AS   P ++ N TVA AA MWC G ++EC+  E++              F SF     T   +  +C
Subjt:  MVHSSNT-----ADATAAMVVLILMLSASNCKAASLVLPPNFVNATVAPAAPMWCHGPLDECLAVEEN--------------FFSFNIGVRTGKNDSSIC

Query:  GRFYMGKYIGCIDKDQGSNKPKICRDNYDRSC
         R   G Y  C +  + + K   C   Y R+C
Subjt:  GRFYMGKYIGCIDKDQGSNKPKICRDNYDRSC

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0434.4Show/hide
Query:  MVHSSNTAD--ATAAMVVLILMLSASNCKAASLVLPPNFVNATVAPAAPMWCHGPLDECLAVEENFFSFNIGVRTG----------KNDSSICGRFYMGK
        M HSSN+    A AAM V IL+LS S+C  AS   P ++ N TVA AA MWC G ++EC+  E +  S    ++T            ++ ++C R    +
Subjt:  MVHSSNTAD--ATAAMVVLILMLSASNCKAASLVLPPNFVNATVAPAAPMWCHGPLDECLAVEENFFSFNIGVRTG----------KNDSSICGRFYMGK

Query:  YIGCIDKDQGSNKPKICRDNYDRSC
        Y  C +  + +  P  C   Y R C
Subjt:  YIGCIDKDQGSNKPKICRDNYDRSC

KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]1.4e-1651.38Show/hide
Query:  ADATAAMVVLILMLSASN-CKAASLVLPPNFVNATV-APAAPMWCHGPLDECLAVEENFFSFNIGVRTGKNDSSICGRFYMGKYIGCIDKDQGSNKPKIC
        A +T AM +LIL L+ S+ C AAS VLP NF N T+ A  + ++C+G L +C  VEEN   +    RTG   SS+CGRFY G YI CI   QGS KPK C
Subjt:  ADATAAMVVLILMLSASN-CKAASLVLPPNFVNATV-APAAPMWCHGPLDECLAVEENFFSFNIGVRTGKNDSSICGRFYMGKYIGCIDKDQGSNKPKIC

Query:  RDNYDRSCT
        R  YDR+C+
Subjt:  RDNYDRSCT

TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein6.8e-1751.38Show/hide
Query:  ADATAAMVVLILMLSASN-CKAASLVLPPNFVNATV-APAAPMWCHGPLDECLAVEENFFSFNIGVRTGKNDSSICGRFYMGKYIGCIDKDQGSNKPKIC
        A +T AM +LIL L+ S+ C AAS VLP NF N T+ A  + ++C+G L +C  VEEN   +    RTG   SS+CGRFY G YI CI   QGS KPK C
Subjt:  ADATAAMVVLILMLSASN-CKAASLVLPPNFVNATV-APAAPMWCHGPLDECLAVEENFFSFNIGVRTGKNDSSICGRFYMGKYIGCIDKDQGSNKPKIC

Query:  RDNYDRSCT
        R  YDR+C+
Subjt:  RDNYDRSCT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACATTCTTCAAACACCGCGGACGCAACGGCGGCCATGGTGGTCCTTATTTTGATGCTGAGCGCAAGCAACTGCAAGGCTGCTTCTCTAGTACTTCCTCCCAATTT
CGTCAACGCGACCGTCGCCCCTGCAGCACCGATGTGGTGCCATGGCCCCCTCGATGAATGCCTGGCCGTTGAAGAAAATTTCTTTAGTTTTAACATTGGTGTAAGGACTG
GAAAGAACGATAGTTCAATATGTGGTCGGTTCTATATGGGAAAGTATATTGGCTGTATCGACAAGGATCAAGGATCCAACAAGCCAAAAATTTGTCGTGACAACTATGAC
CGGAGCTGCACGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTCAATAAACTGGACTTAGATCCACAAGTTCATTATCCTTTCTTCCTTTCATTGTTTCATCCCAGCTCTCTCCGCTTCCGATCCAAATTCCATGGTACATTCTTCAAA
CACCGCGGACGCAACGGCGGCCATGGTGGTCCTTATTTTGATGCTGAGCGCAAGCAACTGCAAGGCTGCTTCTCTAGTACTTCCTCCCAATTTCGTCAACGCGACCGTCG
CCCCTGCAGCACCGATGTGGTGCCATGGCCCCCTCGATGAATGCCTGGCCGTTGAAGAAAATTTCTTTAGTTTTAACATTGGTGTAAGGACTGGAAAGAACGATAGTTCA
ATATGTGGTCGGTTCTATATGGGAAAGTATATTGGCTGTATCGACAAGGATCAAGGATCCAACAAGCCAAAAATTTGTCGTGACAACTATGACCGGAGCTGCACGTAAGA
ACAGAAGGAAAAGTCAACATGTCGTCCGCCAATTTCTCCGGCAGCCTATCAGCTCGTAGCTCACTCTAGTGAGTCTTGTTAGGTTATCTCGTTTGAATTTTATTTGATGA
ACTTGGTAAGGCTTCTGCTTACTACACATGCTATTTTATTATTTATTTTATTTTTTAGGTCGTTACAATTTAAAAATGTCTATTTTTGTTATAAATTCGCTACTTTGGAA
TATATATAATGTGGTTTAATTA
Protein sequenceShow/hide protein sequence
MVHSSNTADATAAMVVLILMLSASNCKAASLVLPPNFVNATVAPAAPMWCHGPLDECLAVEENFFSFNIGVRTGKNDSSICGRFYMGKYIGCIDKDQGSNKPKICRDNYD
RSCT