CuGenDBv2

Gene ID	Tan0008181
Organism	Trichosanthes anguina (Snake gourd v1)
Description	50S ribosomal protein L33, chloroplastic
Genome location	Contig00034:91843..92043
RNA-Seq Expression	Tan0008181
Synteny	Tan0008181
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001705 - Ribosomal protein L33 IPR011332 - Zinc-binding ribosomal protein IPR018264 - Ribosomal protein L33, conserved site IPR038584 - Ribosomal protein L33 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841804.1 ribosomal protein L33 [Cucumis melo subsp. melo]

2.4e-29

95.45

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVN+ES+GISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009317407.1 ribosomal protein L33 [Coccinia grandis]

8.4e-30

96.97

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVN+ESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009456082.1 ribosomal protein L33 [Momordica charantia]

1.1e-29

95.45

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVN+ESMG+SRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009752264.1 ribosomal protein L33 [Trichosanthes baviensis]

3.8e-30

98.48

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009753895.1 ribosomal protein L33 [Trichosanthes lobata]

2.9e-30

100

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

TrEMBL top hits

e value

%identity

Alignment

A0A410HFB3 50S ribosomal protein L33, chloroplastic

4.1e-30

96.97

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVN+ESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A6H0EPE9 50S ribosomal protein L33, chloroplastic

1.8e-30

98.48

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A6H0ESJ1 50S ribosomal protein L33, chloroplastic

1.8e-30

98.48

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A6H0EV38 50S ribosomal protein L33, chloroplastic

1.4e-30

100

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A6H0EVH4 50S ribosomal protein L33, chloroplastic

1.8e-30

98.48

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

SwissProt top hits

e value

%identity

Alignment

A6MM57 50S ribosomal protein L33, chloroplastic

1.1e-29

89.39

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD R+ VILECT CVRNGVN+ES+GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

B1A956 50S ribosomal protein L33, chloroplastic

2.3e-30

90.91

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+T+ILECT CVRNGVN+ES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Q09WZ6 50S ribosomal protein L33, chloroplastic

5.6e-29

86.36

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+T+ILECT C+RN VN+ES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGE+KK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Q2QD68 50S ribosomal protein L33, chloroplastic

7.1e-32

93.94

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRCVRNGVN++S+GISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Q49KX8 50S ribosomal protein L33, chloroplastic

5.6e-29

86.36

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD R+TVILECT CVR G+N+ES G+SRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00640.1 ribosomal protein L33

4.4e-29

83.33

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Query:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD R+T+ILECT CVRN + +E+ GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Sequences

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CDS sequence

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ATGGCCAAGGGTAAAGATGCCCGAATAACAGTTATTTTGGAATGTACTCGTTGTGTTCGAAACGGTGTTAATAGGGAATCAATGGGTATTTCCAGATATATTACTCAAAA
GAATCGACACAATACGCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCCGTTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG

mRNA sequence

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Protein sequence

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MAKGKDARITVILECTRCVRNGVNRESMGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Tan0008181 (gene) of Snake gourd v1 genome