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Tan0008230 (gene) of Snake gourd v1 genome

Gene IDTan0008230
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:63912779..63914199
RNA-Seq ExpressionTan0008230
SyntenyTan0008230
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2672676.1 hypothetical protein I3760_13G053700 [Carya illinoinensis]2.0e-0740.79Show/hide
Query:  FLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNI--PPKGCEC--IPNGFNSRICRCNVVC
        FL+L    +S S    K CP +  + G CSG FG ++C+H+  AKYG    PP  C+C  IPN   +  C+C+V C
Subjt:  FLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNI--PPKGCEC--IPNGFNSRICRCNVVC
KAG6607501.1 hypothetical protein SDJN03_00843, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2875Show/hide
Query:  MDKKFISIPLLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
        M KK I + LLSFLLL LVS SHS DQSKTCP QF STGTC+G  GISECY E+MA+ GNIPPKGC+CIP+G +SRICRCNVVC
Subjt:  MDKKFISIPLLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
KAG6607502.1 hypothetical protein SDJN03_00844, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2671.76Show/hide
Query:  MDKKFI-SIPLLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
        M+KKFI S  LLSFL+L LVS SHS DQSKTCP +F STGTC    G+SECY E+MA++GNIPPKGCECIP G +SRICRCN VC
Subjt:  MDKKFI-SIPLLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
KGN52689.1 hypothetical protein Csa_008701 [Cucumis sativus]2.1e-1764.41Show/hide
Query:  DQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
        DQ +TCPV+F STGTC  P+G + CY E M KYGN PPK C+CIPNG NSR C+CN+ C
Subjt:  DQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
KGN52690.1 hypothetical protein Csa_007932 [Cucumis sativus]2.7e-3379.55Show/hide
Query:  MDKK-FISIPLLSFLLLCLVSISH---SADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
        M+KK FIS+PLLSFLLLCL SI+H   S DQSKTCPV+F STGTCSGPFG+SECYHEAMAKYGNIPPKGCECIP+G NSR C CN++C
Subjt:  MDKK-FISIPLLSFLLLCLVSISH---SADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
TrEMBL top hitse value%identityAlignment
A0A0A0KSV3 Uncharacterized protein1.3e-3379.55Show/hide
Query:  MDKK-FISIPLLSFLLLCLVSISH---SADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
        M+KK FIS+PLLSFLLLCL SI+H   S DQSKTCPV+F STGTCSGPFG+SECYHEAMAKYGNIPPKGCECIP+G NSR C CN++C
Subjt:  MDKK-FISIPLLSFLLLCLVSISH---SADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
A0A0A0KUV4 Uncharacterized protein1.0e-1764.41Show/hide
Query:  DQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
        DQ +TCPV+F STGTC  P+G + CY E M KYGN PPK C+CIPNG NSR C+CN+ C
Subjt:  DQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVC
A0A6A1WK89 Uncharacterized protein1.6e-0739.24Show/hide
Query:  LLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGN--IPPKGCEC--IPNGFNSRICRCNVVC
        L+  L+L L  ++HS  ++K CP +  + G CS  FG S+C+H   AKYG    PP  C+C  IP       C+C+V C
Subjt:  LLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGN--IPPKGCEC--IPNGFNSRICRCNVVC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGAAGTTCATTAGCATTCCTCTCTTATCTTTTCTTCTCCTCTGCCTTGTATCCATTTCTCACTCTGCAGATCAATCAAAGACTTGCCCAGTACAATTTGGGTC
AACAGGGACATGTTCAGGGCCTTTTGGAATCTCAGAATGCTACCATGAAGCAATGGCAAAGTATGGAAATATCCCACCTAAGGGTTGTGAATGCATTCCCAATGGTTTTA
ACTCTCGAATTTGCCGTTGTAATGTTGTTTGTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGAAGTTCATTAGCATTCCTCTCTTATCTTTTCTTCTCCTCTGCCTTGTATCCATTTCTCACTCTGCAGATCAATCAAAGACTTGCCCAGTACAATTTGGGTC
AACAGGGACATGTTCAGGGCCTTTTGGAATCTCAGAATGCTACCATGAAGCAATGGCAAAGTATGGAAATATCCCACCTAAGGGTTGTGAATGCATTCCCAATGGTTTTA
ACTCTCGAATTTGCCGTTGTAATGTTGTTTGTCTTTAA
Protein sequenceShow/hide protein sequence
MDKKFISIPLLSFLLLCLVSISHSADQSKTCPVQFGSTGTCSGPFGISECYHEAMAKYGNIPPKGCECIPNGFNSRICRCNVVCL