; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008232 (gene) of Snake gourd v1 genome

Gene IDTan0008232
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-H2 finger protein ATL46-like
Genome locationLG07:3758201..3759411
RNA-Seq ExpressionTan0008232
SyntenyTan0008232
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159502.1 RING-H2 finger protein ATL2-like [Momordica charantia]1.6e-5866.86Show/hide
Query:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQV--ADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI
        MGFLY AIN  RCSQILHFFT I  +LK L  + G+LKP P+Q   AD   DRP SYVF+TE  CPSLVTVPATDLQARIK SLPIVE+GDF  K  ++ 
Subjt:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQV--ADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI

Query:  GENQS----------CTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR
         E+            CTICLS+ME+SE MREL NCCHVFH+ECLDTWIDEFQITCP+CRSML PA EGDG R+FR
Subjt:  GENQS----------CTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR

XP_022996076.1 RING-H2 finger protein ATL46-like [Cucurbita maxima]1.6e-6677.06Show/hide
Query:  MGFLYLAINSQRCSQILH-FFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI-
        MGFL+ AIN+Q  SQILH  FTRILLQ KLL AHFGL+KPSPE VADSPF+RP SYV LTE   PSLVTVPA DLQ RIK SLPI+EYGDFVEKQG    
Subjt:  MGFLYLAINSQRCSQILH-FFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI-

Query:  -----GENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR
              EN+ CTICL EMERSETMRELCNCCHVFHR+CLDTWIDEF+ITCPVCRSMLFPA EGDGF F R
Subjt:  -----GENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR

XP_023520502.1 RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]3.0e-6876.92Show/hide
Query:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIG-
        MGF   AIN  RC QILHFFTRILL LKLL A FGLLKPSPE  ADSPF  P SY+FLT+DPCPSLVTVPA DLQARIKNSLPIVE+GDF  KQG+E G 
Subjt:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIG-

Query:  -----ENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR
             EN+ CTICLSEMERSE MRELCNC HVFHRECLDTWIDEFQITCPVCRS L P+ +G GFRF R
Subjt:  -----ENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR

XP_023533023.1 RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]1.9e-5976.62Show/hide
Query:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI--
        MGFL+ AIN QR SQILH FTRILLQ KLL AHFGL+KPSPE VA+SPF+RP SYV LTE   PSLVTVPA DLQARIK SLPI+EYGDFVEKQG     
Subjt:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI--

Query:  ----GENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRS
             EN+ CTICL EMERSETMREL NCCHVFH +CLDTWIDEF+ITCPVCRS
Subjt:  ----GENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRS

XP_038907243.1 RING-H2 finger protein ATL2-like [Benincasa hispida]4.7e-6674.56Show/hide
Query:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGE
        MGFLY +IN+  CSQILHFFT ILLQLKLL AHF LLK SPE  ADSPFDRP S+VFLTE PC SLVTVPA DLQ RIK SLPIV + DF+ KQGME GE
Subjt:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGE

Query:  NQS------CTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR
        N+       CT+CL EMERSE+MREL NCCHVFHREC D WIDEFQITCPVCRS+L PA EG GFRFF+
Subjt:  NQS------CTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR

TrEMBL top hitse value%identityAlignment
A0A1R3K6P6 Zinc finger, RING-type7.2e-2851.16Show/hide
Query:  HFGLLKP----SPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQ-----SCTICLSEMERSETMRELCNC
        H GLLKP    S E+   SPF+     + LT+    SLV VP   + A IK  +P+VEYG+F+E+ G E+ + Q      CT+CL  ME ++ MRELCNC
Subjt:  HFGLLKP----SPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQ-----SCTICLSEMERSETMRELCNC

Query:  CHVFHRECLDTWIDEFQITCPVCRSMLFP
         HVFHRECLDTW+DE Q+TCP+CRS L+P
Subjt:  CHVFHRECLDTWIDEFQITCPVCRSMLFP

A0A2G9G363 RING-type domain-containing protein3.2e-2845Show/hide
Query:  MGFLYLAINSQRCSQI---LHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGME
        MGFLY AI   +   I   L+ FT           H GL KP PE+ ++S  D   +Y+ + +   PSLV VP   +   IKN +PI++Y DF+ +   E
Subjt:  MGFLYLAINSQRCSQI---LHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGME

Query:  IGE-----NQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFP
         GE      + C+ICL  +E    +RELCNC H+FHRECLDTWIDE Q+TCP+CRSML P
Subjt:  IGE-----NQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFP

A0A438DBU0 E3 ubiquitin-protein ligase RHA1B2.1e-2746.98Show/hide
Query:  AINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPIS-YVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCT
        +IN      +L +F ++++ + L  AH GL  P PEQ      + P S YV + +   PSLV VP   + A IK  +P+VEYG F+E+ GM   E+  C+
Subjt:  AINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPIS-YVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCT

Query:  ICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAA
        +CL  ++RS  +REL NCCHVFH+ECLDTW+DE Q+TCP+CRSMLFP +
Subjt:  ICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAA

A0A6J1E009 RING-H2 finger protein ATL2-like7.9e-5966.86Show/hide
Query:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQV--ADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI
        MGFLY AIN  RCSQILHFFT I  +LK L  + G+LKP P+Q   AD   DRP SYVF+TE  CPSLVTVPATDLQARIK SLPIVE+GDF  K  ++ 
Subjt:  MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQV--ADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI

Query:  GENQS----------CTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR
         E+            CTICLS+ME+SE MREL NCCHVFH+ECLDTWIDEFQITCP+CRSML PA EGDG R+FR
Subjt:  GENQS----------CTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR

A0A6J1K3P6 RING-H2 finger protein ATL46-like7.8e-6777.06Show/hide
Query:  MGFLYLAINSQRCSQILH-FFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI-
        MGFL+ AIN+Q  SQILH  FTRILLQ KLL AHFGL+KPSPE VADSPF+RP SYV LTE   PSLVTVPA DLQ RIK SLPI+EYGDFVEKQG    
Subjt:  MGFLYLAINSQRCSQILH-FFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEI-

Query:  -----GENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR
              EN+ CTICL EMERSETMRELCNCCHVFHR+CLDTWIDEF+ITCPVCRSMLFPA EGDGF F R
Subjt:  -----GENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR

SwissProt top hitse value%identityAlignment
O64763 E3 ubiquitin-protein ligase ATL91.7e-1035.51Show/hide
Query:  SYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFV--EKQGMEIGE-NQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSML
        S +F + D       V    L AR  ++  I  +  F+  E + + IG+    C +CL E E  ET+R +  CCHVFH +C+D W+ E   TCP+CR+ L
Subjt:  SYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFV--EKQGMEIGE-NQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSML

Query:  FPAAEGD
            +GD
Subjt:  FPAAEGD

Q8L9T5 RING-H2 finger protein ATL21.5e-1435.29Show/hide
Query:  ILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPAT-DLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERS
        ++ FF  IL+    L A + LL+     +     +R  + VF T DP  +  +V A+  L   +  SLP+  + D   K  +E      C +CLSE E S
Subjt:  ILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPAT-DLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERS

Query:  ETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSML
        ET R L NC H FH +C+D W      TCP+CRS++
Subjt:  ETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSML

Q8RXX9 E3 ubiquitin-protein ligase ATL67.7e-1142.39Show/hide
Query:  VTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLF-PAAEGD
        V   A  L   +  + P   Y D V+ Q +  GE + C ICL+E E  ET+R L  C HVFH  C+D W+ E  +TCPVCR+ L    AEG+
Subjt:  VTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLF-PAAEGD

Q9SJJ7 RING-H2 finger protein ATL571.3e-1038.67Show/hide
Query:  LQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRS
        L ++   SLP+  Y    +++      N+ C ICLS+ E  ET++ + +C HVFH +C+DTW+  + +TCP+CRS
Subjt:  LQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRS

Q9XF92 Brassinosteroid-responsive RING protein 12.0e-1141.33Show/hide
Query:  IKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFP
        I+  LP++++ + +   G ++ EN  C +CL E E  + +R L NC H+FHR CLD W+D  Q TCP+CR+   P
Subjt:  IKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFP

Arabidopsis top hitse value%identityAlignment
AT1G63840.1 RING/U-box superfamily protein9.3e-1235.48Show/hide
Query:  DPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEF-QITCPVCRSMLFP
        DP P+L    +  + A     LP+V + D      +   E++ C +CL + E  + +R L NC H+FHR CLD W+  + Q+TCP+CR+   P
Subjt:  DPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEF-QITCPVCRSMLFP

AT3G16720.1 TOXICOS EN LEVADURA 21.1e-1535.29Show/hide
Query:  ILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPAT-DLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERS
        ++ FF  IL+    L A + LL+     +     +R  + VF T DP  +  +V A+  L   +  SLP+  + D   K  +E      C +CLSE E S
Subjt:  ILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPAT-DLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERS

Query:  ETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSML
        ET R L NC H FH +C+D W      TCP+CRS++
Subjt:  ETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSML

AT3G43430.1 RING/U-box superfamily protein3.8e-1340.48Show/hide
Query:  IKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWI--------DEFQITCPVCRSMLFPA
        IK SL +  + D VE+    I  N  C +CL ++E  + +REL NC HVFHR+C+D W+        D+   TCP+CR+ L P+
Subjt:  IKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWI--------DEFQITCPVCRSMLFPA

AT3G61460.1 brassinosteroid-responsive RING-H21.4e-1241.33Show/hide
Query:  IKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFP
        I+  LP++++ + +   G ++ EN  C +CL E E  + +R L NC H+FHR CLD W+D  Q TCP+CR+   P
Subjt:  IKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFP

AT5G20885.1 RING/U-box superfamily protein4.2e-1236.73Show/hide
Query:  PATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWID--------------EFQITCPVCRSMLFPA
        P+   QA IK SL +  + D  E+    I  N +C +CL ++E  + +REL NC H+FHREC+D W+D              +   TCP+CR+ L  A
Subjt:  PATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSEMERSETMRELCNCCHVFHRECLDTWID--------------EFQITCPVCRSMLFPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCCTCTATTTGGCCATTAACAGCCAAAGATGCTCTCAAATCCTCCATTTCTTCACTAGAATCCTCCTCCAATTGAAGCTTCTCCCCGCCCATTTCGGCCTCCT
CAAGCCCTCGCCGGAGCAGGTCGCCGACTCTCCCTTCGATCGCCCGATCAGCTACGTCTTCCTCACCGAAGACCCCTGCCCCTCGCTCGTCACAGTTCCGGCCACCGATT
TGCAGGCCAGGATCAAGAACAGCCTTCCGATCGTGGAGTATGGGGATTTTGTTGAAAAACAGGGGATGGAAATTGGAGAGAATCAGAGTTGTACGATTTGTTTGAGTGAA
ATGGAGAGATCGGAGACGATGAGAGAGCTGTGTAATTGCTGCCATGTCTTCCATCGGGAGTGTTTGGATACGTGGATTGATGAGTTTCAGATTACTTGCCCTGTTTGTAG
ATCCATGCTTTTTCCCGCCGCTGAAGGCGATGGGTTTCGATTCTTCCGGTGA
mRNA sequenceShow/hide mRNA sequence
TCGAAAGGAAGCAAGAAGTGATGGGAAATGAAGACAAAATTGTTTGAGCATAAAAGAATTAACGATGGAGATCGTTTTGATTCAAGTGTTGGACTGAATGAGATATTTTA
ATCAAACGGAAACAAATACAGAGTGTCGAAGAATTCTCAGAATCGGTGTGTTGAATCGATCATATGTTGCGGAACATGAAGAGAGAGAAAAAAGATGGAAAGGAGAAGAG
CGGAGGTCTCTATTTGGGTTGTTTGAAGAAGCAAATACAGAGATTGTTGTGAACAGAGAAATTGGGAATGTGGGCTTTTTGTGAGCAAAAAAAAAAGAAGAAAATGTATA
GATGAAATGAAAGAAGTTGAAGGTGGAGGGAGAAGAAAGGGGAACGAGAGAAGAAAGATGAGGGTGGTTAATCTATAAAGATTCAATTGAACTATGTTATGAGAGAGCCT
TGATTGTTAGATTTTAATTTTGAAATTGAGAGACTTGATAAAAACTCTCTGAAACTTGTGGGCCAAAGTGTATTTTTTCCAAATAAAAATTACCGGTCCGCTTTATCCAG
CTTTCGGCCTTTGTTAAAACTCCGAAATCCGTCAATTATCAAAAACAAAAACGATCCAAACCAGAGCAGTGGGATTTTGGGAATTCCCTTCGTCTCGATCCACAGAAATC
TCATGGGGTTCCTCTATTTGGCCATTAACAGCCAAAGATGCTCTCAAATCCTCCATTTCTTCACTAGAATCCTCCTCCAATTGAAGCTTCTCCCCGCCCATTTCGGCCTC
CTCAAGCCCTCGCCGGAGCAGGTCGCCGACTCTCCCTTCGATCGCCCGATCAGCTACGTCTTCCTCACCGAAGACCCCTGCCCCTCGCTCGTCACAGTTCCGGCCACCGA
TTTGCAGGCCAGGATCAAGAACAGCCTTCCGATCGTGGAGTATGGGGATTTTGTTGAAAAACAGGGGATGGAAATTGGAGAGAATCAGAGTTGTACGATTTGTTTGAGTG
AAATGGAGAGATCGGAGACGATGAGAGAGCTGTGTAATTGCTGCCATGTCTTCCATCGGGAGTGTTTGGATACGTGGATTGATGAGTTTCAGATTACTTGCCCTGTTTGT
AGATCCATGCTTTTTCCCGCCGCTGAAGGCGATGGGTTTCGATTCTTCCGGTGACTCCTCCGCCTGTATTCTCTTTCTTTCTCTCTAATGAAATTGTATTTAAGTATTTT
A
Protein sequenceShow/hide protein sequence
MGFLYLAINSQRCSQILHFFTRILLQLKLLPAHFGLLKPSPEQVADSPFDRPISYVFLTEDPCPSLVTVPATDLQARIKNSLPIVEYGDFVEKQGMEIGENQSCTICLSE
MERSETMRELCNCCHVFHRECLDTWIDEFQITCPVCRSMLFPAAEGDGFRFFR