; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008272 (gene) of Snake gourd v1 genome

Gene IDTan0008272
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein .
Genome locationLG08:21415065..21419925
RNA-Seq ExpressionTan0008272
SyntenyTan0008272
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152888.1 uncharacterized protein LOC111020511 [Momordica charantia]4.7e-2789.66Show/hide
Query:  AASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSP-HPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        +ASVALRSSCLRAICRISTSSA RNVSVSSVLPS+RSSFV RR S SP H LRLLRRELSSLRP+HSAIASACLVSELPAEASASVE
Subjt:  AASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSP-HPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
XP_022937479.1 uncharacterized protein LOC111443881 [Cucurbita moschata]5.5e-2891.95Show/hide
Query:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVALRSSCLRAI RIST SA RNVSVSSVLPSVRSSFVSRR S SPH LRLLRRELSSLRPIHSAIASACLVSELPAEASASV+
Subjt:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
XP_022969556.1 uncharacterized protein LOC111468540 [Cucurbita maxima]2.7e-2789.66Show/hide
Query:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVALRSSCLRAI RIST+S+ RNVSVSS LPSVRSSFVSRR S SPH LRLLRRELSSLRPIHSAIASACLVSELPAEASASV+
Subjt:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
XP_023912928.1 uncharacterized protein LOC112024538 [Quercus suber]1.1e-1264.04Show/hide
Query:  MAASVALRSSCLRAICR--ISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVA RS+ +RA CR  +S SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+P+HSAIASACLVS+LP EAS S E
Subjt:  MAASVALRSSCLRAICR--ISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
XP_030957939.1 uncharacterized protein LOC115979952 [Quercus lobata]1.1e-1264.04Show/hide
Query:  MAASVALRSSCLRAICR--ISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVA RS+ +RA CR  +S SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+P+HSAIASACLVS+LP+EAS S E
Subjt:  MAASVALRSSCLRAICR--ISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
TrEMBL top hitse value%identityAlignment
A0A2N9FKA7 Uncharacterized protein8.3e-1464.21Show/hide
Query:  MAASVALRSSCLRAICRIST--SSATRNVSVSSVLPSVRSSFVSRRNSF-SPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVEEVERS
        MAASVA RS  +RA+CR ST  SSATR  S    LPS  S+FV  R+   SP PLRLLRRELSSL+P+HS IASACLVS+LP+EAS S E  E S
Subjt:  MAASVALRSSCLRAICRIST--SSATRNVSVSSVLPSVRSSFVSRRNSF-SPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVEEVERS
A0A6J1DG34 uncharacterized protein LOC1110205112.3e-2789.66Show/hide
Query:  AASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSP-HPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        +ASVALRSSCLRAICRISTSSA RNVSVSSVLPS+RSSFV RR S SP H LRLLRRELSSLRP+HSAIASACLVSELPAEASASVE
Subjt:  AASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSP-HPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
A0A6J1FBA6 uncharacterized protein LOC1114438812.7e-2891.95Show/hide
Query:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVALRSSCLRAI RIST SA RNVSVSSVLPSVRSSFVSRR S SPH LRLLRRELSSLRPIHSAIASACLVSELPAEASASV+
Subjt:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
A0A6J1HY48 uncharacterized protein LOC1114685401.3e-2789.66Show/hide
Query:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVALRSSCLRAI RIST+S+ RNVSVSS LPSVRSSFVSRR S SPH LRLLRRELSSLRPIHSAIASACLVSELPAEASASV+
Subjt:  MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
A0A7N2KM76 Uncharacterized protein5.4e-1364.04Show/hide
Query:  MAASVALRSSCLRAICR--ISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
        MAASVA RS+ +RA CR  +S SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+P+HSAIASACLVS+LP+EAS S E
Subjt:  MAASVALRSSCLRAICR--ISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27775.1 FUNCTIONS IN: molecular_function unknown7.7e-0442.7Show/hide
Query:  AASVALRSSC-LRAICRISTSSATRNVSVSSVLPSV-RSSFVSRRNSFSPH----PLRLLRRELSSLRPIHSAIASACLVSELPAEASA
        A  +A RS+  +R+I R +T+   RN+  S   PSV   +F S R + S        RLLRRELS+ +P HS IA+ACLVS+LP++ ++
Subjt:  AASVALRSSC-LRAICRISTSSATRNVSVSSVLPSV-RSSFVSRRNSFSPH----PLRLLRRELSSLRPIHSAIASACLVSELPAEASA
AT2G27775.2 FUNCTIONS IN: molecular_function unknown7.7e-0438.61Show/hide
Query:  AASVALRSSC-LRAICRISTSSATRNVSVSSVLPSV-RSSFVSRRNSFSPH----PLRLLRRELSSLRPIHSAIASACLVSELPAEASASVEEVERSLLP
        A  +A RS+  +R+I R +T+   RN+  S   PSV   +F S R + S        RLLRRELS+ +P HS IA+ACLVS+LP++ ++      ++L+ 
Subjt:  AASVALRSSC-LRAICRISTSSATRNVSVSSVLPSV-RSSFVSRRNSFSPH----PLRLLRRELSSLRPIHSAIASACLVSELPAEASASVEEVERSLLP

Query:  Y
        +
Subjt:  Y

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCTGTTGCACTCAGATCCTCCTGTCTCCGAGCAATTTGTAGAATATCCACCAGTTCCGCCACCAGGAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTTCG
CTCAAGTTTCGTTTCTCGAAGAAATTCATTTTCCCCTCACCCTCTAAGGTTGTTGCGACGTGAATTGAGCTCTCTTCGACCTATTCATAGCGCAATTGCCTCCGCTTGCC
TTGTTTCTGAGCTGCCCGCCGAAGCCAGCGCCTCCGTAGAAGAAGTTGAAAGAAGTCTCCTTCCATACAGCCTCATAATTTTGATGAGATGCCTGATAAATGCTGCAAGT
TTTGAGAGAAGTTGTGTCATTGGAAACAAGAGTAAATGCAATTCCAGAGAAATGATTCCCTTCTGTGTCCTTATCTAG
mRNA sequenceShow/hide mRNA sequence
GGAGGTTTTAGGGTTCGGAGTTGACAGAATTCACAGTCGGAAATGGCAGCTTCTGTTGCACTCAGATCCTCCTGTCTCCGAGCAATTTGTAGAATATCCACCAGTTCCGC
CACCAGGAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTTCGCTCAAGTTTCGTTTCTCGAAGAAATTCATTTTCCCCTCACCCTCTAAGGTTGTTGCGACGTGAATTGA
GCTCTCTTCGACCTATTCATAGCGCAATTGCCTCCGCTTGCCTTGTTTCTGAGCTGCCCGCCGAAGCCAGCGCCTCCGTAGAAGAAGTTGAAAGAAGTCTCCTTCCATAC
AGCCTCATAATTTTGATGAGATGCCTGATAAATGCTGCAAGTTTTGAGAGAAGTTGTGTCATTGGAAACAAGAGTAAATGCAATTCCAGAGAAATGATTCCCTTCTGTGT
CCTTATCTAGAACTCACCATTATGGTCGGAAACGGAGGAGCATCTTCTTTGAGTATTCTTGTTCATGTTCATCTTCGTGATTAGCGACCAAGAAAGTGAGCCAACTTCAT
TAGGTTTGAAGTTTTGATCACTTCTTATATATTAAAAAAAGGTTGAGATCACTAGAGTCAGGTGCAAAAACA
Protein sequenceShow/hide protein sequence
MAASVALRSSCLRAICRISTSSATRNVSVSSVLPSVRSSFVSRRNSFSPHPLRLLRRELSSLRPIHSAIASACLVSELPAEASASVEEVERSLLPYSLIILMRCLINAAS
FERSCVIGNKSKCNSREMIPFCVLI