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Tan0008280 (gene) of Snake gourd v1 genome

Gene IDTan0008280
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalmodulin
Genome locationLG02:84889937..84890392
RNA-Seq ExpressionTan0008280
SyntenyTan0008280
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]2.1e-3177.17Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS
        MGNSKS TYKRVLVPF+EEQLA++FK+ DRDGDG LTKEELKQAF YLGSRFS+FR +EALR AD +GDG ISMDEM  LI+Y K RKYT+S
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3385.71Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL
        MGNSKS TYKRVLVP TEEQLA IFKS DRDGDG LTKEELKQAFNYLGSRFSSFRA EALR AD DGDGTI+M EM  LIQYTK RKYTL
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3079.12Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL
        MGNSKS TYKRVLVPF+EEQLA +FK+ D DGDG LTKEELKQAF+YLGSRFSSFR +EALR AD DGDG ISM EM  LIQY K RKYTL
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-3383.52Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL
        MGN+KST YKRVLVPFTEEQLA IFKS DRDGDG L+KEELKQAFNYLGSRFSSFR KEALR AD +GDG ISMDEM  LI+YTK RKYTL
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-3179.12Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL
        MGNSKS TYKRVLVPF+EEQLA +FK+ D DGDG LTKEELKQAF+YLGSRFSSFR +EALR AD+DGDG ISM EM  LIQY K RKYTL
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein3.9e-3176.09Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS
        MGNSKS TYKRVLVPF+EEQLA++FK+ DRDGDG LTKEELKQAF YLGSRF +FR +EALR AD +GDG ISMDEM  LI+Y K RKYT+S
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS

A0A2N9FYQ0 Uncharacterized protein1.4e-1751.72Show/hide
Query:  KSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL
        K  ++KR  +PFTEEQL +IFKS D DGDG L+++E+K+AF YLGSR+ ++RA +A+  AD D DG I  +E+K L+QY     YT+
Subjt:  KSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTL

A0A498JDB9 Uncharacterized protein1.2e-1655.42Show/hide
Query:  KRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS
        K   VP+T EQ+ D+F SFD+DGDGML+KEELK AF  LGSR+  FRA+ AL  AD + DG IS +E+K+L+ Y     YTL+
Subjt:  KRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS

A0A540MJ44 Uncharacterized protein1.2e-1655.42Show/hide
Query:  KRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS
        K   VP+T EQ+ D+F SFD+DGDGML+KEELK AF  LGSR+  FRA+ AL  AD + DG IS +E+K+L+ Y     YTL+
Subjt:  KRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.0e-3177.17Show/hide
Query:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS
        MGNSKS TYKRVLVPF+EEQLA++FK+ DRDGDG LTKEELKQAF YLGSRFS+FR +EALR AD +GDG ISMDEM  LI+Y K RKYT+S
Subjt:  MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS

SwissProt top hitse value%identityAlignment
A4UHC0 Calmodulin2.6e-0841.54Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        TEE+L + FK FDRDG+G ++  EL+     LG + +     E +R ADVDGDG I+ +E   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

O96102 Calmodulin2.0e-0840Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        TEE++ + FK FD+DG+G ++  EL+     LG + S     E +R ADVDGDG ++ DE   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

P24044 Calmodulin9.0e-0940Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        TEE+L + F+ FDRDGDG ++ +EL+     LG + ++    E +R AD+DGDG I+ +E   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

P27166 Calmodulin1.5e-0841.54Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        TEE+L + FK FDRDG+G+++  EL+     LG + +     E +R ADVDGDG I+ +E   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

P62203 Calmodulin9.0e-0940Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        TEE+L + F+ FDRDGDG ++ +EL+     LG + ++    E +R AD+DGDG I+ +E   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family1.0e-0739.71Show/hide
Query:  VPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        V    EQL +IFKSFDRDG+G ++  EL  A   +G   +     E ++ AD +GDG IS  E  +++
Subjt:  VPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

AT1G66410.1 calmodulin 41.3e-0735.38Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        +EE+L + F+ FD+D +G ++  EL+     LG + +    +E +R ADVDGDG I+ +E   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

AT1G66410.2 calmodulin 41.3e-0735.38Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        +EE+L + F+ FD+D +G ++  EL+     LG + +    +E +R ADVDGDG I+ +E   ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI

AT2G27030.3 calmodulin 51.0e-0731.58Show/hide
Query:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS
        +EE+L + F+ FD+D +G ++  EL+     LG + +     E ++ ADVDGDG I+ +E   ++   +R K  ++
Subjt:  TEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS

AT3G51920.1 calmodulin 96.0e-0834.92Show/hide
Query:  EQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI
        ++L ++F+ FDRDGDG++++ EL +    +G + ++  A+  +R AD+DGDG +S  E   ++
Subjt:  EQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCTAAAAGTACAACTTACAAACGAGTTCTGGTTCCATTCACAGAGGAGCAACTAGCCGACATCTTTAAGAGCTTCGACCGAGATGGTGACGGAATGTTGAC
AAAGGAGGAATTAAAACAAGCCTTCAACTATTTGGGCTCACGCTTTAGCTCCTTTAGAGCCAAAGAAGCCCTACGCTTTGCCGATGTCGACGGTGATGGCACCATCAGTA
TGGACGAGATGAAGAACCTAATTCAATATACCAAACGTCGTAAATACACTCTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAACCTCATACCCTATCTTTCTTCTTCTTCTTCTTCTTCGATGGGGAATTCTAAAAGTACAACTTACAAACGAGTTCTGGTTCCATTCACAGAGGAGCAACTAGCCG
ACATCTTTAAGAGCTTCGACCGAGATGGTGACGGAATGTTGACAAAGGAGGAATTAAAACAAGCCTTCAACTATTTGGGCTCACGCTTTAGCTCCTTTAGAGCCAAAGAA
GCCCTACGCTTTGCCGATGTCGACGGTGATGGCACCATCAGTATGGACGAGATGAAGAACCTAATTCAATATACCAAACGTCGTAAATACACTCTTTCTTAAAACTTCAT
ATATGTCTCTCCCTCCCCTTTCTCACTGTATCATGTTCTTTCTTCTTTATGGGTGTATTTATATGTACTTTGGAAATAACTTTCTTGCTTAAATATTAAATAAATATACG
AGTTTCATCTCCACAA
Protein sequenceShow/hide protein sequence
MGNSKSTTYKRVLVPFTEEQLADIFKSFDRDGDGMLTKEELKQAFNYLGSRFSSFRAKEALRFADVDGDGTISMDEMKNLIQYTKRRKYTLS