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Tan0008319 (gene) of Snake gourd v1 genome

Gene IDTan0008319
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNodulin-like domain-containing protein
Genome locationLG01:114032005..114032485
RNA-Seq ExpressionTan0008319
SyntenyTan0008319
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]1.5e-2056.73Show/hide
Query:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD
        LIS  A +L+L+S  NIS+ Q RLLP+E+P  +++  ++H K VE+ AVAPL+S P AF     + +  D+EV GGDFRPTT GHSPGAGHS+AP SH+D
Subjt:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD

Query:  SKIH
        SKIH
Subjt:  SKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2764.76Show/hide
Query:  TNLISAAAFLLVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHV
        T + S     L+L+SI NIS+  GRLLP+EHP   + GNLH KIVE+A VAPL SRPPAF+R+  +    D EV GGDFRPTTPGHSPG GHSLAP SHV
Subjt:  TNLISAAAFLLVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHV

Query:  DSKIH
        DSKIH
Subjt:  DSKIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2060.87Show/hide
Query:  MAGTNLIS--AAAFLLVLASI--TNISYIQG-RLLPM--EHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGA
        MAG NLIS  AAA LLVLASI   NI + QG RLLPM  EHP +                  L SRP +F  SPIA  A+D++VHGGDFRPTTPGHSPGA
Subjt:  MAGTNLIS--AAAFLLVLASI--TNISYIQG-RLLPM--EHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGA

Query:  GHSLAPESHVDSKIH
        GH LAP+SHVDSKIH
Subjt:  GHSLAPESHVDSKIH

KAG7024239.1 Polyadenylate-binding protein RBP47C, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2365.56Show/hide
Query:  LVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHV
        L+L+SI NIS+  GRLLP+EHP   + GN H KIVE+A VAPL SRPPAF+R+  +    D EV GGDFRPTTPGHSPG GHSLAP SH+
Subjt:  LVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHV

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]3.6e-2259.62Show/hide
Query:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD
        LIS  A +L+L+S  NIS+ Q RLLPME+P  +++  +LH K VE+ AVAPL+S P AF     + +  D+EV GGDFRPTTPGHSPGAGHS+AP SH+D
Subjt:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD

Query:  SKIH
        SKIH
Subjt:  SKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein6.9e-1952.88Show/hide
Query:  LISAAAFLLVLASITNISYIQGRLLPMEH-PGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD
        LIS    +L+L+S  ++S+ Q R+ P ++   ++++ +LH KI E+ AVAPL+S P AF R     + S+ EV GGDFRPTTPGHSPGAGHS+AP SH+D
Subjt:  LISAAAFLLVLASITNISYIQGRLLPMEH-PGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD

Query:  SKIH
        SKIH
Subjt:  SKIH

A0A0D2RCK2 Uncharacterized protein4.8e-0434.82Show/hide
Query:  MAGTNLISAAAFLLVLASITNISYIQGRLL---PMEHPG-IDLTG---NLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGA
        MA  NLI AA F+ VL     I++ +GRLL    ++ PG +D+T    +L+  I+E A+ A             +  + +       DF+PTTPGHSPGA
Subjt:  MAGTNLISAAAFLLVLASITNISYIQGRLL---PMEHPG-IDLTG---NLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGA

Query:  GHSLAPESHVDS
        GH+  P  + ++
Subjt:  GHSLAPESHVDS

A0A5A7VEP2 Uncharacterized protein7.4e-2156.73Show/hide
Query:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD
        LIS  A +L+L+S  NIS+ Q RLLP+E+P  +++  ++H K VE+ AVAPL+S P AF     + +  D+EV GGDFRPTT GHSPGAGHS+AP SH+D
Subjt:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD

Query:  SKIH
        SKIH
Subjt:  SKIH

A0A5D3D9H8 Uncharacterized protein1.8e-2259.62Show/hide
Query:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD
        LIS  A +L+L+S  NIS+ Q RLLPME+P  +++  +LH K VE+ AVAPL+S P AF     + +  D+EV GGDFRPTTPGHSPGAGHS+AP SH+D
Subjt:  LISAAAFLLVLASITNISYIQGRLLPMEHPG-IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVD

Query:  SKIH
        SKIH
Subjt:  SKIH

B9HHI1 Uncharacterized protein4.8e-0434.58Show/hide
Query:  MAGTNLISAAAFLLVLASITNISYIQGRLLPMEHPG----------IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHS
        MA +NL+SA  FL+++ S   + +I+GR L ++ P           ++    LH        V   +  PPA     +      L  H  DFRPT PGHS
Subjt:  MAGTNLISAAAFLLVLASITNISYIQGRLLPMEHPG----------IDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHS

Query:  PGAGHSL
        PG GHSL
Subjt:  PGAGHSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66815.1 unknown protein6.2e-0432.99Show/hide
Query:  AAFLLVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAV--------APLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLA
        A + L+L      + + GR L ++       G+  SK + + A           +Q  PP     P      D E    DFRPTTPGHSPG GHSL+
Subjt:  AAFLLVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAV--------APLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAACCAATCTCATCTCTGCCGCCGCGTTCCTGCTCGTTTTAGCTTCTATTACTAATATATCATACATCCAAGGAAGGTTGCTGCCGATGGAGCATCCCGGAAT
CGATCTCACCGGAAATCTCCACAGCAAAATCGTCGAATCCGCCGCTGTCGCTCCTCTCCAGTCAAGGCCACCGGCATTTCGCCGCTCTCCCATTGCTGTTAGTGCTAGTG
ATTTGGAGGTGCACGGCGGCGACTTCCGTCCGACCACCCCAGGTCACAGTCCCGGTGCCGGCCACTCCCTTGCGCCGGAGAGCCACGTAGATTCGAAAATCCATTAG
mRNA sequenceShow/hide mRNA sequence
GCATCACATACTTCAGCTTCCTCTTCTCTCTCATCATCTCTTATTTCTCTCTCTGATCTGATCTCTAAAACAGCATTTCAGACAGAAATGGCCGGAACCAATCTCATCTC
TGCCGCCGCGTTCCTGCTCGTTTTAGCTTCTATTACTAATATATCATACATCCAAGGAAGGTTGCTGCCGATGGAGCATCCCGGAATCGATCTCACCGGAAATCTCCACA
GCAAAATCGTCGAATCCGCCGCTGTCGCTCCTCTCCAGTCAAGGCCACCGGCATTTCGCCGCTCTCCCATTGCTGTTAGTGCTAGTGATTTGGAGGTGCACGGCGGCGAC
TTCCGTCCGACCACCCCAGGTCACAGTCCCGGTGCCGGCCACTCCCTTGCGCCGGAGAGCCACGTAGATTCGAAAATCCATTAGAAATCTTATAAATCTTATAATTAGTT
GTACGTTCGTAACTAATTAGTTATGTATTCATATTATGAAC
Protein sequenceShow/hide protein sequence
MAGTNLISAAAFLLVLASITNISYIQGRLLPMEHPGIDLTGNLHSKIVESAAVAPLQSRPPAFRRSPIAVSASDLEVHGGDFRPTTPGHSPGAGHSLAPESHVDSKIH