; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008345 (gene) of Snake gourd v1 genome

Gene IDTan0008345
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG06:45227394..45228585
RNA-Seq ExpressionTan0008345
SyntenyTan0008345
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]9.3e-1534.39Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLP-PRIRKFEESWIQHEECDNIIKEHWTNQKGNNV
        GD FTWC     +  I ERLDRF IN  +     ++ + HL F  SD+R I+   +    A  GR    R  +FEE W   +EC  I++  W  Q     
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLP-PRIRKFEESWIQHEECDNIIKEHWTNQKGNNV

Query:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQVRIAEK
          +  KI+ C+E L   N  RL GS++  I RKE EI+ M+      + D +  A++
Subjt:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQVRIAEK

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]8.2e-1134.51Show/hide
Query:  CKNKDDKDS--IRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVEHYSS
        C+N+       I ERLDRF IN  + N   ++ V HL    SD+R I+ +              R  +FEESW+Q + C +II   W +  G  +E + +
Subjt:  CKNKDDKDS--IRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVEHYSS

Query:  KISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNS
        KI  C+  L+  NK RLN S+K  I  KE E++ +   +G+S
Subjt:  KISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNS

XP_027077092.1 uncharacterized protein LOC113700858 [Coffea arabica]5.7e-1229.63Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQ-KGNNV
        G  FTWC N+  +  I +RLDR  +N    +   SVTVDHL  H SD+  +++ +  R  +      PR  +F  +W  HEE   ++K+ W  + +G  +
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQ-KGNNV

Query:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAEKRAR
            SK+ R   S+ + N++R+ G+    +++ E+E+  +   +  G S +DQ+++ + +AR
Subjt:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAEKRAR

XP_030478056.1 uncharacterized protein LOC115695105 [Cannabis sativa]6.3e-1131.45Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIR-KFEESWIQHEECDNIIKEHWTNQKGNN-
        GD FTW K ++   +I+ERLD  F+N  L N  ++  V HL++++SD+R I +T     SA   +   R   +FE+ W+   +C +II +HW N   ++ 
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIR-KFEESWIQHEECDNIIKEHWTNQKGNN-

Query:  VEHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAE
        +   S+ +    E+L SL++++  G +K  IK  + +++++     N NS+ D+++ AE
Subjt:  VEHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAE

XP_030502656.1 uncharacterized protein LOC115717824 [Cannabis sativa]3.3e-1235.71Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVE
        G  FTWCKN+ +  +++ERLD  FIN    +++ S  V HL ++ SD+R I+  I  +S+  + +   R R FE+ WI+  EC +II   W    GN +E
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVE

Query:  HYSSKISRCIESLSSLNKKRLNGSIK
          +  +S C   L S ++ +  G+IK
Subjt:  HYSSKISRCIESLSSLNKKRLNGSIK

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224234.5e-1534.39Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLP-PRIRKFEESWIQHEECDNIIKEHWTNQKGNNV
        GD FTWC     +  I ERLDRF IN  +     ++ + HL F  SD+R I+   +    A  GR    R  +FEE W   +EC  I++  W  Q     
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLP-PRIRKFEESWIQHEECDNIIKEHWTNQKGNNV

Query:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQVRIAEK
          +  KI+ C+E L   N  RL GS++  I RKE EI+ M+      + D +  A++
Subjt:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQVRIAEK

A0A6P6TGC6 uncharacterized protein LOC1137008582.7e-1229.63Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQ-KGNNV
        G  FTWC N+  +  I +RLDR  +N    +   SVTVDHL  H SD+  +++ +  R  +      PR  +F  +W  HEE   ++K+ W  + +G  +
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQ-KGNNV

Query:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAEKRAR
            SK+ R   S+ + N++R+ G+    +++ E+E+  +   +  G S +DQ+++ + +AR
Subjt:  EHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAEKRAR

A0A803NM27 Uncharacterized protein2.7e-1231.21Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVE
        G  FTWCKN+ +  +++ERLD  FIN   ++   +  V HL ++ SD+R I+ TI  +S+  + +   R R FE+ WI+  EC +II   W +   N +E
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVE

Query:  HYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLAN--GNSYSDQVRIAE
          +  +S+C   L S ++ +  G+ K  I   ++ + ++   +    S+  QV+ AE
Subjt:  HYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLAN--GNSYSDQVRIAE

A0A803PY51 Uncharacterized protein4.2e-1334.19Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTII-CRSSAGQGRLPPRIR--KFEESWIQHEECDNIIKEHWTN-QKG
        GD FTW K +   D+I+ERLD  F N        S+   HL++++SD+R I + I+   S+  Q +  PR    +FE+ W+Q EE  N+I+++W     G
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTII-CRSSAGQGRLPPRIR--KFEESWIQHEECDNIIKEHWTN-QKG

Query:  NNVEHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQV
        N  + + + + RC ESL   ++++  GS K  I R + ++K   L N N  S  V
Subjt:  NNVEHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQV

A0A803QAH8 Uncharacterized protein2.7e-1231.85Show/hide
Query:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVE
        G  FTWCKN+ D  +++ERLD  FIN   ++   +  V HL ++ SD+R I+ TI  +S+  + +   R   FE+ WI+  EC +II   W +   N +E
Subjt:  GDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWTNQKGNNVE

Query:  HYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAE
          +  +S+C   L S +K +  G+ K  I   ++ + ++     +  S+  QV+ AE
Subjt:  HYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSM--LLANGNSYSDQVRIAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAGTGGCAAAGGCAAAAGGGAGTCACAAAATGGTTCAATTTCGAAGGGGAGATTGTTTCACTTGGTGCAAGAACAAGGATGATAAAGATAGCATTCGTGAAAG
ACTTGACAGGTTTTTTATCAACCCCCCTCTAAGCAATGCAGTTCACTCGGTCACTGTGGACCATTTGAATTTCCACAAGTCTGACAATCGGCAAATCATGTTGACTATTA
TCTGTCGGTCTTCGGCTGGTCAAGGACGTTTGCCCCCGCGGATAAGAAAGTTTGAGGAGAGTTGGATCCAACATGAGGAGTGCGACAATATCATTAAAGAACACTGGACC
AACCAAAAGGGGAACAATGTCGAGCACTATAGTAGCAAAATCAGTAGATGCATTGAGTCTCTCAGTTCCTTGAACAAGAAGAGACTTAATGGATCAATCAAAGCGACTAT
TAAAAGAAAAGAATCTGAAATTAAGTCGATGCTACTGGCAAACGGTAATTCTTATTCGGATCAAGTTAGGATAGCTGAAAAAAGAGCTCGACAACCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAAGTGGCAAAGGCAAAAGGGAGTCACAAAATGGTTCAATTTCGAAGGGGAGATTGTTTCACTTGGTGCAAGAACAAGGATGATAAAGATAGCATTCGTGAAAG
ACTTGACAGGTTTTTTATCAACCCCCCTCTAAGCAATGCAGTTCACTCGGTCACTGTGGACCATTTGAATTTCCACAAGTCTGACAATCGGCAAATCATGTTGACTATTA
TCTGTCGGTCTTCGGCTGGTCAAGGACGTTTGCCCCCGCGGATAAGAAAGTTTGAGGAGAGTTGGATCCAACATGAGGAGTGCGACAATATCATTAAAGAACACTGGACC
AACCAAAAGGGGAACAATGTCGAGCACTATAGTAGCAAAATCAGTAGATGCATTGAGTCTCTCAGTTCCTTGAACAAGAAGAGACTTAATGGATCAATCAAAGCGACTAT
TAAAAGAAAAGAATCTGAAATTAAGTCGATGCTACTGGCAAACGGTAATTCTTATTCGGATCAAGTTAGGATAGCTGAAAAAAGAGCTCGACAACCTCATTGA
Protein sequenceShow/hide protein sequence
MAQVAKAKGSHKMVQFRRGDCFTWCKNKDDKDSIRERLDRFFINPPLSNAVHSVTVDHLNFHKSDNRQIMLTIICRSSAGQGRLPPRIRKFEESWIQHEECDNIIKEHWT
NQKGNNVEHYSSKISRCIESLSSLNKKRLNGSIKATIKRKESEIKSMLLANGNSYSDQVRIAEKRARQPH