; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008409 (gene) of Snake gourd v1 genome

Gene IDTan0008409
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG05:65167350..65167990
RNA-Seq ExpressionTan0008409
SyntenyTan0008409
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036930.1 uncharacterized protein E6C27_scaffold86G00020 [Cucumis melo var. makuwa]1.2e-2236.36Show/hide
Query:  IQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCV-WDQLEISCSDACVVLSRRHLSIKDYVSPSYS
        +Q WFY+R+    Y  + LS   E  +R+++   R F V PV+   +QV+DG     V LN  SC+C+ WD  EISC+ A +V+   +L+   +VS  Y 
Subjt:  IQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCV-WDQLEISCSDACVVLSRRHLSIKDYVSPSYS

Query:  IILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKY
          +L +TY G +  +GN   W + +   N  IL P  +R  GRP+   IPS  +  +  KC RC R GHN +T ++
Subjt:  IILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKY

KAA0051992.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.2e-2743.02Show/hide
Query:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        M++Q WF++R+ND DYQVT  +K +   LRE I   R  +V  VNN  YQVI+G  Q+ +                            +L  K +VSP Y
Subjt:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNK
            L S Y   IN +G+  +W IP  + +I IL PNVKR VGRPK   I S +EFKRRVKCGRCGR+GHN+
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNK

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]1.2e-2236.93Show/hide
Query:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTC-VWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        +IQ WFY+R+    +Q T LS   ED +RE +   R   ++PV+ H ++V     Q  V++ NR+C+C  WD   I CS AC+ LS R+L++  Y    Y
Subjt:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTC-VWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYK
         +  L + Y      +G  ++        N  IL P VKR  GRPK     S LE K  V+C RCG+ GHN ++ K
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYK

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]5.5e-3143.09Show/hide
Query:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        M++Q WFY R+NDVD+Q+T  +K+ E +L E I   R  +V+ VNN  YQ                                     +HL  K YVS  Y
Subjt:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKYVLIQ
        S   L STYSGSI+ +G++  W+IP+ ++ IK+L PNVKR  GRPK   IPS LEFK+RVKC RCGR GHN+K+ K+ L Q
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKYVLIQ

XP_022871448.1 protein FAR1-RELATED SEQUENCE 5-like [Olea europaea var. sylvestris]2.7e-2234.29Show/hide
Query:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQL-EISCSDACVVLSRRHLSIKDYVSPSY
        ++Q+WF   K D     T LS   E ++REM    R  +VFP+N   + V        VD+ NR+CTC   Q+ ++ C  A  V +   +   +Y S  Y
Subjt:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQL-EISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTY
        +    R+TY  +I  VGN   W +P  + +I +++PN KR  GRP         +    +KCGRCG  GHN++TY
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTY

TrEMBL top hitse value%identityAlignment
A0A5A7U1T3 Uncharacterized protein1.3e-2237.43Show/hide
Query:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTC-VWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        +IQ WFY+R+    +Q T LS   ED +RE +   R   ++PV+ H ++V     Q  V++ NR+C+C  WD   I CS AC+ LS R+L++  Y +  Y
Subjt:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTC-VWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHN
         +  L + Y      +G  ++        N  IL P VKR  GRPK     S LE K  V+C RCG+ GHN
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHN

A0A5D3BEQ2 SWIM-type domain-containing protein5.9e-2336.36Show/hide
Query:  IQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCV-WDQLEISCSDACVVLSRRHLSIKDYVSPSYS
        +Q WFY+R+    Y  + LS   E  +R+++   R F V PV+   +QV+DG     V LN  SC+C+ WD  EISC+ A +V+   +L+   +VS  Y 
Subjt:  IQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCV-WDQLEISCSDACVVLSRRHLSIKDYVSPSYS

Query:  IILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKY
          +L +TY G +  +GN   W + +   N  IL P  +R  GRP+   IPS  +  +  KC RC R GHN +T ++
Subjt:  IILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKY

A0A5D3C2C0 Protein FAR1-RELATED SEQUENCE 3-like1.0e-2743.02Show/hide
Query:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        M++Q WF++R+ND DYQVT  +K +   LRE I   R  +V  VNN  YQVI+G  Q+ +                            +L  K +VSP Y
Subjt:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNK
            L S Y   IN +G+  +W IP  + +I IL PNVKR VGRPK   I S +EFKRRVKCGRCGR+GHN+
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNK

A0A5D3CDB8 Uncharacterized protein5.9e-2336.93Show/hide
Query:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTC-VWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        +IQ WFY+R+    +Q T LS   ED +RE +   R   ++PV+ H ++V     Q  V++ NR+C+C  WD   I CS AC+ LS R+L++  Y    Y
Subjt:  VIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTC-VWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYK
         +  L + Y      +G  ++        N  IL P VKR  GRPK     S LE K  V+C RCG+ GHN ++ K
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYK

A0A6J1DNQ8 uncharacterized protein LOC1110223472.6e-3143.09Show/hide
Query:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY
        M++Q WFY R+NDVD+Q+T  +K+ E +L E I   R  +V+ VNN  YQ                                     +HL  K YVS  Y
Subjt:  MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSY

Query:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKYVLIQ
        S   L STYSGSI+ +G++  W+IP+ ++ IK+L PNVKR  GRPK   IPS LEFK+RVKC RCGR GHN+K+ K+ L Q
Subjt:  SIILLRSTYSGSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKYVLIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATTCAAGCGTGGTTTTACGACCGGAAGAATGATGTTGATTACCAAGTAACATACCTTTCAAAAGCTGTCGAAGACGAATTACGAGAGATGATCTACCACGATCG
TAGATTCCAGGTATTCCCAGTTAATAATCATTTTTATCAAGTAATTGATGGACCAGGTCAACATGAAGTGGATCTGAATAATCGAAGTTGTACATGTGTATGGGACCAAT
TAGAAATCTCATGTTCCGATGCATGTGTTGTCTTAAGTCGTAGACACTTATCTATTAAAGATTACGTTTCACCATCATATTCGATCATTTTGTTGCGTTCCACATATTCT
GGTTCAATAAATCTGGTTGGAAATGAAGATCGTTGGGATATACCTAAATCCTTGCAGAACATTAAGATTTTGTCACCCAATGTCAAACGTGATGTTGGTAGACCAAAAAA
TGCACATATTCCTTCACCATTGGAGTTCAAAAGGCGAGTCAAATGTGGGAGATGTGGAAGGATTGGTCACAACAAGAAGACTTACAAGTATGTCCTTATACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTATTCAAGCGTGGTTTTACGACCGGAAGAATGATGTTGATTACCAAGTAACATACCTTTCAAAAGCTGTCGAAGACGAATTACGAGAGATGATCTACCACGATCG
TAGATTCCAGGTATTCCCAGTTAATAATCATTTTTATCAAGTAATTGATGGACCAGGTCAACATGAAGTGGATCTGAATAATCGAAGTTGTACATGTGTATGGGACCAAT
TAGAAATCTCATGTTCCGATGCATGTGTTGTCTTAAGTCGTAGACACTTATCTATTAAAGATTACGTTTCACCATCATATTCGATCATTTTGTTGCGTTCCACATATTCT
GGTTCAATAAATCTGGTTGGAAATGAAGATCGTTGGGATATACCTAAATCCTTGCAGAACATTAAGATTTTGTCACCCAATGTCAAACGTGATGTTGGTAGACCAAAAAA
TGCACATATTCCTTCACCATTGGAGTTCAAAAGGCGAGTCAAATGTGGGAGATGTGGAAGGATTGGTCACAACAAGAAGACTTACAAGTATGTCCTTATACAGTAG
Protein sequenceShow/hide protein sequence
MVIQAWFYDRKNDVDYQVTYLSKAVEDELREMIYHDRRFQVFPVNNHFYQVIDGPGQHEVDLNNRSCTCVWDQLEISCSDACVVLSRRHLSIKDYVSPSYSIILLRSTYS
GSINLVGNEDRWDIPKSLQNIKILSPNVKRDVGRPKNAHIPSPLEFKRRVKCGRCGRIGHNKKTYKYVLIQ