| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 5.4e-176 | 40.08 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
M++SI+ LL ++KL G+N WK+ LNTILVVDDL+FV+TEE PQ P NA+R VR+AY+RWVKANDKA+VY+LASM+D+LAKKH+ + AK IMDS+R
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA-----------------------------------------------GRMVLPSMSRS
MFGQ S RH +K+I+ RM EGTSV +HVLDMM+HFNIA R ++S+
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA-----------------------------------------------GRMVLPSMSRS
Query: RKVRQMLPV---------------------------GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKE-----------------------
++V + V G KVK ADKGKCFH N+DGHWKRNCPKY+AEK E
Subjt: RKVRQMLPV---------------------------GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKE-----------------------
Query: -----GATNHVCYSFRGIDSGGRADKEGEITLGLEMEKSSHQRAEGH------------------------------------------NEALFWC----
GATNH+C+SF+ S + KEGEITL + + A G NE C
Subjt: -----GATNHVCYSFRGIDSGGRADKEGEITLGLEMEKSSHQRAEGH------------------------------------------NEALFWC----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTP
+SR+GH+YL+HHKSE+ EKFKE+K EVEN++ AP TP
Subjt: ------------------------------YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTP
Query: QQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKE
QQN V ERRNRTLLDMVRSMMSYA L SFWGY +E A++ILNNVPSKSV ETP+ELWKGRK GYPKE
Subjt: QQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKE
Query: IRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSEL------------------------------------DGTIAKPDRYMGLVEIQVVIPD
RGGLFY P+E+KVF+S N FL EDH R+H+P+SK+VL E+ + +P+RY+GLVE Q++IPD
Subjt: IRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSEL------------------------------------DGTIAKPDRYMGLVEIQVVIPD
Query: DNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIR
D EDPLTY QAM D D+D+W+ M+ EMESMYFNSVW LVD VKPIGCKWIYKRKR KVQTFKARLVAKGYTQ EGVDYEETFSPVAM+KSIR
Subjt: DNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIR
Query: ILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
ILL+IA +Y++E+W+MDVKTAFLN NLEE+IYM Q +GFI +EQKVC+L++SIYGLKQASRSWNIRFD AI+ F
Subjt: ILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 7.5e-186 | 47.6 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
+SS+ + +L A KL G N +WKN +N +L++DDL+FV+ E+ PQVP +NA+R VR+ Y RW KAN+KA+ Y+LAS+S++LAKKHE M+ A+EIMDS++
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLPVGVI---------------------------------
MFGQ S Q +H+ LKYI+N+RM EG SV +HVL+MMVHFN+A V+ S+ + + LP +
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLPVGVI---------------------------------
Query: ------------------TEGKK------------------------------VKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKEGATNHVCYSFRGID
T G K K A KG CF N++GHWKRNCPKY+A+K K F G
Subjt: ------------------TEGKK------------------------------VKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKEGATNHVCYSFRGID
Query: SGGRADKEGEITLGLEMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL-------------------------------
G RA + E+ + ++ + +A G E YSR+G++YLM HKSEALEKFKE+K EVEN L
Subjt: SGGRADKEGEITLGLEMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL-------------------------------
Query: ---APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK------------------------------
APDTPQQN V ERRNRTLLDMVRSMMSYAHL +SFWGY V+ AVYILN VPSKSVSETP +LW G K
Subjt: ---APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK------------------------------
Query: ---GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------
GYPK RGG FYDPK++KVF+S N FL EDHIR+HKP+SK+VL+EL +P
Subjt: ---GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------
Query: RYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDY
RYM L E VI D + EDPLT+ +AM D DKD+W+ M+ E+ESMYFNSVWDLVD+ DGVKPIGCKWIYKRKRG D KVQTFKARLVAKGYTQVEGVDY
Subjt: RYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDY
Query: EETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
EETFSPVAM+KSIRILL+IAAY+D+E+W+MDVKTAFLN NLEE IYM Q +GFI PG+EQK+C+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: EETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| KAA0058278.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-178 | 50.33 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
M SSII LL +LTGEN TWK+KLN ILV+ DL FV+ EE P P AS++VRDAY+RW KANDKA++++LASM DIL+KKHE M+ A +IMDS+R
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
MFGQ S Q + N+A R +PS S S K+++ + E K VA K KCFH N D HWK NC
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
Query: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
PKY + +K KEGATNHVC S + +D GR K G E L +M K
Subjt: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
Query: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQLAPDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSS
+ +A G E + YSR+G++YLM HKSEALEKFKE+KTEVEN L P TPQQN V ERRNRTLLDMVRSMM YA L SS
Subjt: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQLAPDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSS
Query: FWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIR
FWGY VE AV+ILNNVPSKSVSE PFELW+ RK GYPKE RGGLF+DP+E++VF+S N FL EDH+R
Subjt: FWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIR
Query: DHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQ
+HKP+SK+VLSE +D T +++P+RY+GL E QVVIPDD EDPL+Y QAM D DKD+WV MD
Subjt: DHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQ
Query: EMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNL
EMESMYFNSVW+LVD +GVKPIGCKWIYKRKR KVQTFKARLVAKGYTQ EGVDYEETFS VAM+KSIRILL+IA +YD+E+W+MDVKTAFLN NL
Subjt: EMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNL
Query: EENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
EE+I+M Q +GFI G+EQKVC+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: EENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 4.0e-179 | 49.04 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
MSSSII LL +LTGEN TWK+KLN ILV+ DL FV+ EE P P +AS++VRDAY+RW KANDKA++++LASMSDIL+KKHE M+ A++IMDS+R
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
MFGQ S Q + N+A R +PS S S K+++ + E K VA K KCFH N D HWK NC
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
Query: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
PKY + +K KEGATNHVC S + +D GR K G E L +M K
Subjt: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
Query: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------
+ +A G E + YSR+G++YLM HKSEALEKFKE+KTEVEN L
Subjt: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------
Query: APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------
AP TPQQN V ERRNRTLLDMVRSMMSYA L SSFWGY VE AV+ILNNVPSKSVSETPFELW+GRK
Subjt: APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------
Query: GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVE
GYPKE RGGLF+DP+E++VF+S N FL EDH+R+HKP+SK+VLSE +D T +++P+RY+GL E
Subjt: GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVE
Query: IQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPV
QVVIPDD EDPL+Y QAM D DKD+WV MD EMESMYFNSVW+LVD +GVKPIGCKWIYKRKR KVQTFKARLVAKGYTQ EGVDYEETFSPV
Subjt: IQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPV
Query: AMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
AM+KSIRILL+IA +YD+E+W+MDVKTAFLN NLEE+I+M Q +GFI G+EQKVC+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: AMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-189 | 48.65 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
M+++ + +L A KL G N +WKN +N +L++DDLKFV+ EE PQVP +NA++ VR+ Y RW K N+K + Y+LAS+S++LAKKHE M+ A+EIMDS++
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA---------------------------------GRMVLPSMSRSRKVR-----QMLPV
MFGQ S Q H+ LKYI+N+RM EG SV +HVL+MMVHFN+A G +PS S ++K + Q
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA---------------------------------GRMVLPSMSRSRKVR-----QMLPV
Query: GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKN--KEGATN---------------------HVCYSF-------RGIDSGGRADKEGEITLGL
+ K A KG CFHYN++GHWKRNCPKY+AEK K+G N +C S R G KE +
Subjt: GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKN--KEGATN---------------------HVCYSF-------RGIDSGGRADKEGEITLGL
Query: EMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTPQQNNVLE
++ + +A G E YSR+G++YLM HKSEALEKFKE+K EVEN L AP TPQQN V E
Subjt: EMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTPQQNNVLE
Query: RRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFY
RRNRTLLDMVRSM+SYAHL +SFWGY V+ AVYILN VPSKSVSETP +LW GRK GYPK RGG FY
Subjt: RRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFY
Query: DPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------RYMGLVEIQVVIPDD
DPK++KVF+S N FL EDHIR+HKP+SK+VL+EL +P RYM L E VI D
Subjt: DPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------RYMGLVEIQVVIPDD
Query: NCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRI
+ EDPLT+ +AM D DKD+W+ M+ E+ESMYFNSVWDLVD+ DGVKPIGCKWIYKRKRG D KVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRI
Subjt: NCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRI
Query: LLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
LL+IAAY+D+E+W+MDVKTAFLN NLEE IYM Q +GFI PG+EQK+C+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: LLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNP8 Gag/pol protein | 3.6e-186 | 47.6 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
+SS+ + +L A KL G N +WKN +N +L++DDL+FV+ E+ PQVP +NA+R VR+ Y RW KAN+KA+ Y+LAS+S++LAKKHE M+ A+EIMDS++
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLPVGVI---------------------------------
MFGQ S Q +H+ LKYI+N+RM EG SV +HVL+MMVHFN+A V+ S+ + + LP +
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLPVGVI---------------------------------
Query: ------------------TEGKK------------------------------VKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKEGATNHVCYSFRGID
T G K K A KG CF N++GHWKRNCPKY+A+K K F G
Subjt: ------------------TEGKK------------------------------VKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKEGATNHVCYSFRGID
Query: SGGRADKEGEITLGLEMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL-------------------------------
G RA + E+ + ++ + +A G E YSR+G++YLM HKSEALEKFKE+K EVEN L
Subjt: SGGRADKEGEITLGLEMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL-------------------------------
Query: ---APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK------------------------------
APDTPQQN V ERRNRTLLDMVRSMMSYAHL +SFWGY V+ AVYILN VPSKSVSETP +LW G K
Subjt: ---APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK------------------------------
Query: ---GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------
GYPK RGG FYDPK++KVF+S N FL EDHIR+HKP+SK+VL+EL +P
Subjt: ---GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------
Query: RYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDY
RYM L E VI D + EDPLT+ +AM D DKD+W+ M+ E+ESMYFNSVWDLVD+ DGVKPIGCKWIYKRKRG D KVQTFKARLVAKGYTQVEGVDY
Subjt: RYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDY
Query: EETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
EETFSPVAM+KSIRILL+IAAY+D+E+W+MDVKTAFLN NLEE IYM Q +GFI PG+EQK+C+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: EETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| A0A5A7USZ2 Gag/pol protein | 7.3e-179 | 50.33 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
M SSII LL +LTGEN TWK+KLN ILV+ DL FV+ EE P P AS++VRDAY+RW KANDKA++++LASM DIL+KKHE M+ A +IMDS+R
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
MFGQ S Q + N+A R +PS S S K+++ + E K VA K KCFH N D HWK NC
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
Query: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
PKY + +K KEGATNHVC S + +D GR K G E L +M K
Subjt: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
Query: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQLAPDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSS
+ +A G E + YSR+G++YLM HKSEALEKFKE+KTEVEN L P TPQQN V ERRNRTLLDMVRSMM YA L SS
Subjt: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQLAPDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSS
Query: FWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIR
FWGY VE AV+ILNNVPSKSVSE PFELW+ RK GYPKE RGGLF+DP+E++VF+S N FL EDH+R
Subjt: FWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIR
Query: DHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQ
+HKP+SK+VLSE +D T +++P+RY+GL E QVVIPDD EDPL+Y QAM D DKD+WV MD
Subjt: DHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVEIQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQ
Query: EMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNL
EMESMYFNSVW+LVD +GVKPIGCKWIYKRKR KVQTFKARLVAKGYTQ EGVDYEETFS VAM+KSIRILL+IA +YD+E+W+MDVKTAFLN NL
Subjt: EMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNL
Query: EENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
EE+I+M Q +GFI G+EQKVC+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: EENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| A0A5A7UYE8 Gag/pol protein | 1.9e-179 | 49.04 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
MSSSII LL +LTGEN TWK+KLN ILV+ DL FV+ EE P P +AS++VRDAY+RW KANDKA++++LASMSDIL+KKHE M+ A++IMDS+R
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
MFGQ S Q + N+A R +PS S S K+++ + E K VA K KCFH N D HWK NC
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA--GRMVLPSMSRSRKVRQMLP-----VGVITEGKKVKDVADKGKCFHYNEDGHWKRNC
Query: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
PKY + +K KEGATNHVC S + +D GR K G E L +M K
Subjt: PKY-IAEKNKEGATNHVCYSFR------------------------------------GIDSGGRADKEG-------------EITLGLEMEK-------
Query: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------
+ +A G E + YSR+G++YLM HKSEALEKFKE+KTEVEN L
Subjt: ----------------SSHQRAEGHNE---ALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------
Query: APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------
AP TPQQN V ERRNRTLLDMVRSMMSYA L SSFWGY VE AV+ILNNVPSKSVSETPFELW+GRK
Subjt: APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------
Query: GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVE
GYPKE RGGLF+DP+E++VF+S N FL EDH+R+HKP+SK+VLSE +D T +++P+RY+GL E
Subjt: GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSE-----------------LDGT---------------------IAKPDRYMGLVE
Query: IQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPV
QVVIPDD EDPL+Y QAM D DKD+WV MD EMESMYFNSVW+LVD +GVKPIGCKWIYKRKR KVQTFKARLVAKGYTQ EGVDYEETFSPV
Subjt: IQVVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPV
Query: AMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
AM+KSIRILL+IA +YD+E+W+MDVKTAFLN NLEE+I+M Q +GFI G+EQKVC+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: AMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| A0A5D3BHG7 Gag/pol protein | 9.2e-190 | 48.65 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
M+++ + +L A KL G N +WKN +N +L++DDLKFV+ EE PQVP +NA++ VR+ Y RW K N+K + Y+LAS+S++LAKKHE M+ A+EIMDS++
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA---------------------------------GRMVLPSMSRSRKVR-----QMLPV
MFGQ S Q H+ LKYI+N+RM EG SV +HVL+MMVHFN+A G +PS S ++K + Q
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA---------------------------------GRMVLPSMSRSRKVR-----QMLPV
Query: GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKN--KEGATN---------------------HVCYSF-------RGIDSGGRADKEGEITLGL
+ K A KG CFHYN++GHWKRNCPKY+AEK K+G N +C S R G KE +
Subjt: GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKN--KEGATN---------------------HVCYSF-------RGIDSGGRADKEGEITLGL
Query: EMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTPQQNNVLE
++ + +A G E YSR+G++YLM HKSEALEKFKE+K EVEN L AP TPQQN V E
Subjt: EMEKSSHQRAEGHNEALFWC---YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTPQQNNVLE
Query: RRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFY
RRNRTLLDMVRSM+SYAHL +SFWGY V+ AVYILN VPSKSVSETP +LW GRK GYPK RGG FY
Subjt: RRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKEIRGGLFY
Query: DPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------RYMGLVEIQVVIPDD
DPK++KVF+S N FL EDHIR+HKP+SK+VL+EL +P RYM L E VI D
Subjt: DPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSELDGTIAKPD------------------------------------------RYMGLVEIQVVIPDD
Query: NCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRI
+ EDPLT+ +AM D DKD+W+ M+ E+ESMYFNSVWDLVD+ DGVKPIGCKWIYKRKRG D KVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRI
Subjt: NCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRI
Query: LLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
LL+IAAY+D+E+W+MDVKTAFLN NLEE IYM Q +GFI PG+EQK+C+L RSIYGLKQASRSWNIRFD AI+ F
Subjt: LLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| E2GK51 Gag/pol protein (Fragment) | 2.6e-176 | 40.08 | Show/hide |
Query: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
M++SI+ LL ++KL G+N WK+ LNTILVVDDL+FV+TEE PQ P NA+R VR+AY+RWVKANDKA+VY+LASM+D+LAKKH+ + AK IMDS+R
Subjt: MSSSIICLLGAKKLTGENMMTWKNKLNTILVVDDLKFVVTEEYPQVPGSNASRNVRDAYNRWVKANDKAKVYMLASMSDILAKKHEGMIIAKEIMDSVRG
Query: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA-----------------------------------------------GRMVLPSMSRS
MFGQ S RH +K+I+ RM EGTSV +HVLDMM+HFNIA R ++S+
Subjt: MFGQQSTQARHNVLKYIFNSRMPEGTSVWDHVLDMMVHFNIA-----------------------------------------------GRMVLPSMSRS
Query: RKVRQMLPV---------------------------GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKE-----------------------
++V + V G KVK ADKGKCFH N+DGHWKRNCPKY+AEK E
Subjt: RKVRQMLPV---------------------------GVITEGKKVKDVADKGKCFHYNEDGHWKRNCPKYIAEKNKE-----------------------
Query: -----GATNHVCYSFRGIDSGGRADKEGEITLGLEMEKSSHQRAEGH------------------------------------------NEALFWC----
GATNH+C+SF+ S + KEGEITL + + A G NE C
Subjt: -----GATNHVCYSFRGIDSGGRADKEGEITLGLEMEKSSHQRAEGH------------------------------------------NEALFWC----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTP
+SR+GH+YL+HHKSE+ EKFKE+K EVEN++ AP TP
Subjt: ------------------------------YSRFGHIYLMHHKSEALEKFKEFKTEVENQL----------------------------------APDTP
Query: QQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKE
QQN V ERRNRTLLDMVRSMMSYA L SFWGY +E A++ILNNVPSKSV ETP+ELWKGRK GYPKE
Subjt: QQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVSETPFELWKGRK---------------------------------GYPKE
Query: IRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSEL------------------------------------DGTIAKPDRYMGLVEIQVVIPD
RGGLFY P+E+KVF+S N FL EDH R+H+P+SK+VL E+ + +P+RY+GLVE Q++IPD
Subjt: IRGGLFYDPKEDKVFMSINVIFLGEDHIRDHKPKSKVVLSEL------------------------------------DGTIAKPDRYMGLVEIQVVIPD
Query: DNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIR
D EDPLTY QAM D D+D+W+ M+ EMESMYFNSVW LVD VKPIGCKWIYKRKR KVQTFKARLVAKGYTQ EGVDYEETFSPVAM+KSIR
Subjt: DNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIR
Query: ILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
ILL+IA +Y++E+W+MDVKTAFLN NLEE+IYM Q +GFI +EQKVC+L++SIYGLKQASRSWNIRFD AI+ F
Subjt: ILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNIRFDEAIEILWF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.1e-29 | 23.44 | Show/hide |
Query: RAEGH-NEALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQLAPDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSV-
++E H N + + Y G YL S + +F K + P TPQ N V ER RT+ + R+M+S A L SFWG V A Y++N +PS+++
Subjt: RAEGH-NEALFWCYSRFGHIYLMHHKSEALEKFKEFKTEVENQLAPDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSV-
Query: --SETPFELWKGRKGYPKEIR-------------GGLF-----------YDPKEDKVFMSIN-------------------------VIFLGEDHIRDHK
S+TP+E+W +K Y K +R G F Y+P K++ ++N +FL + ++K
Subjt: --SETPFELWKGRKGYPKEIR-------------GGLF-----------YDPKEDKVFMSIN-------------------------VIFLGEDHIRDHK
Query: ----PKSKVVLSELDGTIAKPDRYMGLVE----------------IQVVIPDD-----------------------------------------------
K++ +E + D L + IQ P++
Subjt: ----PKSKVVLSELDGTIAKPDRYMGLVE----------------IQVVIPDD-----------------------------------------------
Query: ---------------------------------------NCED-----------------PLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSD
N ED P ++++ DK W ++ E+ + N+ W + + +
Subjt: ---------------------------------------NCED-----------------PLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSD
Query: GVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKE
+ +W++ K +KARLVA+G+TQ +DYEETF+PVA + S R +L++ Y+ +V +MDVKTAFLN L+E IYM +G
Subjt: GVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKE
Query: QKVCRLKRSIYGLKQASRSWNIRFDEAIE
VC+L ++IYGLKQA+R W F++A++
Subjt: QKVCRLKRSIYGLKQASRSWNIRFDEAIE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-48 | 31.76 | Show/hide |
Query: PDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVS-ETPFELWKGRK---------------------------------
P TPQ N V ER NRT+++ VRSM+ A L SFWG V+ A Y++N PS ++ E P +W ++
Subjt: PDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVS-ETPFELWKGRK---------------------------------
Query: --GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIR-----DHKPKSKVV-------------------------LSELDGTIAKPDRYM--GLVEIQ--
GY E G +DP + KV S +V+F E +R K K+ ++ E G + + + G+ E++
Subjt: --GYPKEIRGGLFYDPKEDKVFMSINVIFLGEDHIR-----DHKPKSKVV-------------------------LSELDGTIAKPDRYM--GLVEIQ--
Query: ----------------------------VVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQ
V+I DD +P + + + +K++ + M +EMES+ N + LV+ G +P+ CKW++K K+ D K+
Subjt: ----------------------------VVIPDDNCEDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQ
Query: TFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNI
+KARLV KG+ Q +G+D++E FSPV + SIR +L++AA D EV ++DVKTAFL+ +LEE IYM+Q +GF GK+ VC+L +S+YGLKQA R W +
Subjt: TFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNI
Query: RFD
+FD
Subjt: RFD
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.5e-11 | 39.53 | Show/hide |
Query: WVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIA
W M +E++++ N W LV +GCKW++K K D + KARLVAKG+ Q EG+ + ET+SPV +IR +L +A
Subjt: WVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.2e-30 | 41.46 | Show/hide |
Query: DPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDG-VKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILL
+P T QA+ D ++W M E+ + N WDLV V +GC+WI+ +K D + +KARLVAKGY Q G+DY ETFSPV SIRI+L
Subjt: DPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDG-VKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILL
Query: AIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNI
+A + + ++DV AFL L +++YM Q GFI+ + VC+L++++YGLKQA R+W +
Subjt: AIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-04 | 31.15 | Show/hide |
Query: PDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVS-ETPFE
P TP+ N + ER++R +++ +++S+A + ++W Y +AVY++N +P+ + E+PF+
Subjt: PDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWGYTVEIAVYILNNVPSKSVS-ETPFE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-31 | 43.29 | Show/hide |
Query: DPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLV-DKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILL
+P T QAM D D+W M E+ + N WDLV V +GC+WI+ +K D + +KARLVAKGY Q G+DY ETFSPV SIRI+L
Subjt: DPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLV-DKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILL
Query: AIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNI
+A + + ++DV AFL L + +YM Q GF++ + VCRL+++IYGLKQA R+W +
Subjt: AIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFIEPGKEQKVCRLKRSIYGLKQASRSWNI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-04 | 23.2 | Show/hide |
Query: YSRFGHIYLMHHKSEALEKFKEFKTEVENQL--------------------------------APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWG
++R+ +Y + KS+ + F FK+ VEN+ P TP+ N + ER++R +++M +++S+A + ++W
Subjt: YSRFGHIYLMHHKSEALEKFKEFKTEVENQL--------------------------------APDTPQQNNVLERRNRTLLDMVRSMMSYAHLHSSFWG
Query: YTVEIAVYILNNVPSKSVS-ETPFE
Y +AVY++N +P+ + ++PF+
Subjt: YTVEIAVYILNNVPSKSVS-ETPFE
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G05360.1 Zinc knuckle (CCHC-type) family protein | 1.8e-04 | 38.03 | Show/hide |
Query: KCFHYNEDGHWKRNCPKYIAEKNKEGATNHVCY----SFRGIDSGGRADKE-GEITLGLEMEKSSHQRAEG
KC+HY GH KRNC ++I E + EG + + F G SGG D G++ L LE+ S H + G
Subjt: KCFHYNEDGHWKRNCPKYIAEKNKEGATNHVCY----SFRGIDSGGRADKE-GEITLGLEMEKSSHQRAEG
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 6.2e-37 | 45.29 | Show/hide |
Query: EDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILL
++P TYN+A K+ W MD E+ +M W++ KPIGCKW+YK K D ++ +KARLVAKGYTQ EG+D+ ETFSPV + S++++L
Subjt: EDPLTYNQAMVDKDKDKWVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILL
Query: AIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFI----EPGKEQKVCRLKRSIYGLKQASRSWNIRF
AI+A Y+F + ++D+ AFLN +L+E IYM G+ + VC LK+SIYGLKQASR W ++F
Subjt: AIAAYYDFEVWKMDVKTAFLNCNLEENIYMDQLKGFI----EPGKEQKVCRLKRSIYGLKQASRSWNIRF
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1e-12 | 39.53 | Show/hide |
Query: WVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIA
W M +E++++ N W LV +GCKW++K K D + KARLVAKG+ Q EG+ + ET+SPV +IR +L +A
Subjt: WVIPMDQEMESMYFNSVWDLVDKSDGVKPIGCKWIYKRKRGVDEKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLAIA
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