; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008458 (gene) of Snake gourd v1 genome

Gene IDTan0008458
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationLG11:60071722..60074285
RNA-Seq ExpressionTan0008458
SyntenyTan0008458
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045180.1 uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]6.6e-1631.25Show/hide
Query:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------
        +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  TQDPTQGQSE GSS PR Q EA  EQ   S QE        
Subjt:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
                 W +FS LVE+ LRVEQSI++ ++ ++ +RG  TTS   GREQRRFT GVNVL  QDFK R+GG
Subjt:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.8e-1731.09Show/hide
Query:  QVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE-------------------------
        ++ +  NVCW HA F AK A      VMPPRTS+RRRQ+Q R QDPTQGQSERGSS PR Q EA  E+ V S QE                         
Subjt:  QVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE-------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
            W DFS L+E+ LRVEQSI+E ++ ++ +RG STTS   GREQRR T GVN+   QDFK R GG
Subjt:  ----WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

KAA0056353.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.6e-1731.82Show/hide
Query:  VYKPSNVCWFHASFRAKLAE---------VMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------
        + +  +VCW H  FRAK            VMPPRTSKR RQ+Q  TQDPTQGQSERGSS PR Q EA  E+   S QE                      
Subjt:  VYKPSNVCWFHASFRAKLAE---------VMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
         W DFS LVE+ LRVEQSI+E ++V++ +RG STTS   GREQRRFT GVNV   QDFK R+GG
Subjt:  -WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

TYK00845.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]3.3e-1537.85Show/hide
Query:  VYKPSNVCWFHASFRAKL-------AEVMPPRTSKRR--RQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------
        + +  +VCW HA FRAK+              T+ ++  + + G       GQSERGSS PR Q EA  E+   S QE                      
Subjt:  VYKPSNVCWFHASFRAKL-------AEVMPPRTSKRR--RQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------

Query:  --------------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
                      W DFS LVE+ LRVEQSI+E ++ ++ +RG STTS   GREQRRFT GV+V   QDFK R+GG
Subjt:  --------------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

TYK27372.1 uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]6.6e-1631.25Show/hide
Query:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------
        +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  TQDPTQGQSE GSS PR Q EA  EQ   S QE        
Subjt:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
                 W +FS LVE+ LRVEQSI++ ++ ++ +RG  TTS   GREQRRFT GVNVL  QDFK R+GG
Subjt:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

TrEMBL top hitse value%identityAlignment
A0A5A7TPS6 Retrotrans_gag domain-containing protein3.2e-1631.25Show/hide
Query:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------
        +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  TQDPTQGQSE GSS PR Q EA  EQ   S QE        
Subjt:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
                 W +FS LVE+ LRVEQSI++ ++ ++ +RG  TTS   GREQRRFT GVNVL  QDFK R+GG
Subjt:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

A0A5A7U9X4 DNA/RNA polymerases superfamily protein3.8e-1731.09Show/hide
Query:  QVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE-------------------------
        ++ +  NVCW HA F AK A      VMPPRTS+RRRQ+Q R QDPTQGQSERGSS PR Q EA  E+ V S QE                         
Subjt:  QVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE-------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
            W DFS L+E+ LRVEQSI+E ++ ++ +RG STTS   GREQRR T GVN+   QDFK R GG
Subjt:  ----WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

A0A5A7UKD3 DNA/RNA polymerases superfamily protein2.2e-1731.82Show/hide
Query:  VYKPSNVCWFHASFRAKLAE---------VMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------
        + +  +VCW H  FRAK            VMPPRTSKR RQ+Q  TQDPTQGQSERGSS PR Q EA  E+   S QE                      
Subjt:  VYKPSNVCWFHASFRAKLAE---------VMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
         W DFS LVE+ LRVEQSI+E ++V++ +RG STTS   GREQRRFT GVNV   QDFK R+GG
Subjt:  -WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

A0A5D3BNX1 Zf-CCHC domain-containing protein1.6e-1537.85Show/hide
Query:  VYKPSNVCWFHASFRAKL-------AEVMPPRTSKRR--RQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------
        + +  +VCW HA FRAK+              T+ ++  + + G       GQSERGSS PR Q EA  E+   S QE                      
Subjt:  VYKPSNVCWFHASFRAKL-------AEVMPPRTSKRR--RQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE----------------------

Query:  --------------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
                      W DFS LVE+ LRVEQSI+E ++ ++ +RG STTS   GREQRRFT GV+V   QDFK R+GG
Subjt:  --------------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

A0A5D3DV36 Retrotrans_gag domain-containing protein3.2e-1631.25Show/hide
Query:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------
        +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  TQDPTQGQSE GSS PR Q EA  EQ   S QE        
Subjt:  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQE--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG
                 W +FS LVE+ LRVEQSI++ ++ ++ +RG  TTS   GREQRRFT GVNVL  QDFK R+GG
Subjt:  ---------WADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCT
TATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGAAGTCA
TGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCT
AGAGATGAGCAACATGTTAGTTCTACACAGGAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAA
GCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCG
GCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCT
TATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGAAGTCA
TGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCT
AGAGATGAGCAACATGTTAGTTCTACACAGGAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAA
GCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCG
GCTAG
Protein sequenceShow/hide protein sequence
MKKLWLFENRAENLKMLEIGKCVFCSFKVKNHELEVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLAEVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEA
RDEQHVSSTQEWADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG