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Tan0008470 (gene) of Snake gourd v1 genome

Gene IDTan0008470
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43357335..43357550
RNA-Seq ExpressionTan0008470
SyntenyTan0008470
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]3.3e-0853.62Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRG
        +SWLIC+V ISMLV  +EV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-0849.3Show/hide
Query:  ICLVLISMLVTGKEVAADR------TYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        ICL LI+ML+T ++V  ++       YLK ++C++PNPP  CS    +G   V AN Y RGCSAI+RCRGG
Subjt:  ICLVLISMLVTGKEVAADR------TYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]1.6e-1057.14Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICLVLI MLV  ++VA++  +LK  D C  PNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]6.1e-1057.14Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC+VLISMLV  +EVA++  +LK  D C  PNPP  CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]5.9e-1361.43Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC+V ISMLV G  VAA++ YL+ +D CN PNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein9.1e-1260Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICL LI MLV G+EVAA+  +LK +D CN P+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein1.6e-0853.62Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRG
        +SWLIC+V ISMLV  +EV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRG

A0A1S4DY33 protein RALF-like 303.0e-0752.86Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC  L+SMLV G EVAA   +LK +D C  P+PP SC   +    +P+   AY RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

A0A6J1G7J2 protein RALF-like 107.7e-1157.14Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICLVLI MLV  ++VA++  +LK  D C  PNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLKLVD-CNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

B2Y4P6 Putative rapid alkalinization factor (RALF) family protein8.9e-0744.29Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL++IS  VT + V + R Y++   +  C  PNPPP C  P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 125.0e-0740Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 134.5e-0841.43Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

O64466 Protein RALF-like 119.1e-0942.86Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

O65919 Protein RALF-like 102.5e-0640.3Show/hide
Query:  LICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        +ICL++I   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 253.8e-0746.48Show/hide
Query:  MKQSWLICLVLISMLVTGKEVAAD--RTYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C  PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLISMLVTGKEVAAD--RTYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 101.8e-0740.3Show/hide
Query:  LICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        +ICL++I   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 116.5e-1042.86Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 123.6e-0840Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 133.2e-0941.43Show/hide
Query:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTGKEVAADRTYLK---LVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 252.7e-0846.48Show/hide
Query:  MKQSWLICLVLISMLVTGKEVAAD--RTYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C  PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLISMLVTGKEVAAD--RTYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTTATTAGCATGTTGGTGACAGGAAAAGAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGATTGCAACAACCCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTTATTAGCATGTTGGTGACAGGAAAAGAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGATTGCAACAACCCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLISMLVTGKEVAADRTYLKLVDCNNPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG