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Tan0008509 (gene) of Snake gourd v1 genome

Gene IDTan0008509
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationLG11:4739603..4759880
RNA-Seq ExpressionTan0008509
SyntenyTan0008509
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]1.1e-0445.83Show/hide
Query:  CHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFAC
        C +KLYD  C +++C +KC EK+ ++S +C+PT    + YACYCF+ C
Subjt:  CHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFAC

KGN52438.1 hypothetical protein Csa_008032 [Cucumis sativus]1.6e-0545.61Show/hide
Query:  PEVVHASPCHEKLYDYACEVSECQRKCEEKYPN-SSSECVPTPQLASNYACYCFFAC
        P+V +A  C +KLYD  C   EC+++C  KYPN SSS+C+  P +  + AC CF+ C
Subjt:  PEVVHASPCHEKLYDYACEVSECQRKCEEKYPN-SSSECVPTPQLASNYACYCFFAC

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]5.8e-1158.49Show/hide
Query:  AGALMVPEAVHGAKCEEKLYEGCVSKDCSQRCQQKYPNSSSECVPIPPIPYNY
        + A ++P  V   KCE KLY+GC+ KDC+Q+C  KYPNSSSECV +PPIP++Y
Subjt:  AGALMVPEAVHGAKCEEKLYEGCVSKDCSQRCQQKYPNSSSECVPIPPIPYNY

XP_022923678.1 putative defensin-like protein 129 [Cucurbita moschata]1.2e-1150Show/hide
Query:  CVPIPPIPYNYVFALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP
        C P+  +      ALM PE   ASPCHE+LY+  CE S C+++CEEKY  S+ ECVP P    + AC CFF CP
Subjt:  CVPIPPIPYNYVFALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP

XP_022990690.1 putative defensin-like protein 129 [Cucurbita maxima]6.8e-1257.38Show/hide
Query:  ALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP
        ALM PE   ASPCHE+LY+  CE S C+++CEEKY  S+ ECVP P    + AC CFF CP
Subjt:  ALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP

TrEMBL top hitse value%identityAlignment
A0A0A0KS76 Uncharacterized protein7.9e-0645.61Show/hide
Query:  PEVVHASPCHEKLYDYACEVSECQRKCEEKYPN-SSSECVPTPQLASNYACYCFFAC
        P+V +A  C +KLYD  C   EC+++C  KYPN SSS+C+  P +  + AC CF+ C
Subjt:  PEVVHASPCHEKLYDYACEVSECQRKCEEKYPN-SSSECVPTPQLASNYACYCFFAC

A0A0A0KU45 Uncharacterized protein2.8e-1158.49Show/hide
Query:  AGALMVPEAVHGAKCEEKLYEGCVSKDCSQRCQQKYPNSSSECVPIPPIPYNY
        + A ++P  V   KCE KLY+GC+ KDC+Q+C  KYPNSSSECV +PPIP++Y
Subjt:  AGALMVPEAVHGAKCEEKLYEGCVSKDCSQRCQQKYPNSSSECVPIPPIPYNY

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat5.1e-0545.83Show/hide
Query:  CHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFAC
        C +KLYD  C +++C +KC EK+ ++S +C+PT    + YACYCF+ C
Subjt:  CHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFAC

A0A6J1EAA9 putative defensin-like protein 1295.6e-1250Show/hide
Query:  CVPIPPIPYNYVFALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP
        C P+  +      ALM PE   ASPCHE+LY+  CE S C+++CEEKY  S+ ECVP P    + AC CFF CP
Subjt:  CVPIPPIPYNYVFALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP

A0A6J1JQS7 putative defensin-like protein 1293.3e-1257.38Show/hide
Query:  ALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP
        ALM PE   ASPCHE+LY+  CE S C+++CEEKY  S+ ECVP P    + AC CFF CP
Subjt:  ALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQLASNYACYCFFACP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAAATATTGAAAAATTTTGCAGGTGCATTGATGGTGCCTGAAGCAGTCCATGGAGCAAAATGTGAGGAGAAGTTGTATGAAGGATGTGTGTCTAAGGATTGTAG
CCAAAGATGTCAACAGAAGTATCCAAATTCATCATCTGAATGTGTTCCAATTCCTCCAATTCCTTATAACTATGTTTTTGCATTGATGGCGCCTGAAGTAGTTCATGCAA
GTCCTTGCCATGAGAAATTATATGATTATGCATGCGAAGTTTCTGAATGTCAACGAAAGTGTGAAGAGAAGTACCCTAATTCATCATCTGAATGCGTTCCAACTCCTCAA
CTTGCCTCTAACTATGCTTGCTATTGTTTCTTCGCTTGCCCTACTCAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCAAATATTGAAAAATTTTGCAGGTGCATTGATGGTGCCTGAAGCAGTCCATGGAGCAAAATGTGAGGAGAAGTTGTATGAAGGATGTGTGTCTAAGGATTGTAG
CCAAAGATGTCAACAGAAGTATCCAAATTCATCATCTGAATGTGTTCCAATTCCTCCAATTCCTTATAACTATGTTTTTGCATTGATGGCGCCTGAAGTAGTTCATGCAA
GTCCTTGCCATGAGAAATTATATGATTATGCATGCGAAGTTTCTGAATGTCAACGAAAGTGTGAAGAGAAGTACCCTAATTCATCATCTGAATGCGTTCCAACTCCTCAA
CTTGCCTCTAACTATGCTTGCTATTGTTTCTTCGCTTGCCCTACTCAACATTAA
Protein sequenceShow/hide protein sequence
MIQILKNFAGALMVPEAVHGAKCEEKLYEGCVSKDCSQRCQQKYPNSSSECVPIPPIPYNYVFALMAPEVVHASPCHEKLYDYACEVSECQRKCEEKYPNSSSECVPTPQ
LASNYACYCFFACPTQH