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Tan0008542 (gene) of Snake gourd v1 genome

Gene IDTan0008542
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand
Genome locationLG02:85116745..85117146
RNA-Seq ExpressionTan0008542
SyntenyTan0008542
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585661.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3683.7Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC
        MGNSKSK+YKRVLVP SE+QL D+FK+HDRDGDGKL+KEELKQAFSY+GSRFSAFRAEEALR VD + DG VSMDEM KLIQYTKGRKYT+C
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3480.43Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC
        MGNSKSK+YKRVLVP +E+QLA +FK+HDRDGDGKLTKEELKQAF+Y+GSRFS+FRA+EALRA DAD DGT++M EM KLIQYTK RKYTLC
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3381.52Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC
        MGNSKSK+YKRVLVPFSE+QLA VFKNHD DGDGKLTKEELKQAF Y+GSRFS+FR EEALRA D D DG +SM EM KLIQY K RKYTLC
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3276.09Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC
        MGN+KS +YKRVLVPF+E+QLA +FK+HDRDGDGKL+KEELKQAF+Y+GSRFS+FR +EALRA D + DG +SMDEM KLI+YTKGRKYTLC
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3381.52Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC
        MGNSKSK+YKRVLVPFSE+QLA VFKNHD DGDGKLTKEELKQAF Y+GSRFS+FR EEALRA D D DG +SM EM KLIQY K RKYTLC
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein1.0e-3178.02Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL
        MGNSKSK+YKRVLVPFSE+QLA+VFKNHDRDGDG LTKEELKQAF Y+GSRF  FR EEALRA D + DG +SMDEM KLI+Y K RKYT+
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL

A0A2N9FYQ0 Uncharacterized protein2.2e-1850.57Show/hide
Query:  KSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL
        K  S+KR  +PF+E+QL ++FK+HD DGDGKL+++E+K+AF Y+GSR+ A+RA +A+   DAD DG +  +E+KKL+QY     YT+
Subjt:  KSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein2.1e-3279.12Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL
        MGNSKSK+YKRVLVPFSE+QLA+VFKNHDRDGDG LTKEELKQAF Y+GSRFS FR EEALRA D + DG +SMDEM KLI+Y K RKYT+
Subjt:  MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL

A0A5A7VBH2 Calcium-binding EF-hand4.6e-1653.01Show/hide
Query:  YKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL
        YKR  VPFS DQL D+F  HD DGDG+L++ ELK AF  +GS +S FRA ++L+A DAD DG V++DE+  L+ Y   R+Y +
Subjt:  YKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL

A0A7N2KRS3 Uncharacterized protein2.2e-1851.72Show/hide
Query:  KSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL
        K+ ++KR  VPF+E QL ++FK+HD DGDGKL+++ELK AF Y+GSR+ A+R ++ALR  DA+ DG ++ DE+KKL++Y     YT+
Subjt:  KSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTL

SwissProt top hitse value%identityAlignment
P04630 Calmodulin-like protein2.1e-0529.17Show/hide
Query:  KRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI
        KR++     + + + F+  D+DG+G +T +E +    +MG +FS    +E ++ VD D DG +  +E  K++
Subjt:  KRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI

Q0DJV6 Probable calcium-binding protein CML181.9e-0636.11Show/hide
Query:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRK
        SE +L + F+ +D D +GK++  EL +    +G + S       +R+VDAD DG V+ DE KK++    GR+
Subjt:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRK

Q3E9C0 Calcium-dependent protein kinase 341.6e-0532.91Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE
        M N K  + + +    SE++   L ++FK  D D  G +T EEL+Q  +  G+R S +  ++ + A DAD +GT+   E
Subjt:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE

Q9FMP5 Calcium-dependent protein kinase 171.6e-0532.91Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE
        M N K  + + +    SE++   L ++FK  D D  G +T EEL+Q  +  G+R S +  ++ + A DAD +GT+   E
Subjt:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE

Q9S744 Calmodulin-like protein 99.4e-0638.46Show/hide
Query:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI
        + D+L +VF+  DRDGDG +++ EL +    MG + +A  AE  +R  D D DG +S  E  K++
Subjt:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI

Arabidopsis top hitse value%identityAlignment
AT3G50770.1 calmodulin-like 411.9e-0636.92Show/hide
Query:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI
        S+++L  VF + D DGDGK++  EL+  F  +G   S   A+EA+  VD D DG++  ++   L+
Subjt:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI

AT3G51920.1 calmodulin 96.6e-0738.46Show/hide
Query:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI
        + D+L +VF+  DRDGDG +++ EL +    MG + +A  AE  +R  D D DG +S  E  K++
Subjt:  SEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLI

AT4G04695.1 calcium-dependent protein kinase 314.3e-0634.18Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE
        M   K  + K +    SE++   L  +F N D D  G +T EELK   + +GS  S    E+ + A D D +GT+ +DE
Subjt:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE

AT5G12180.1 calcium-dependent protein kinase 171.1e-0632.91Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE
        M N K  + + +    SE++   L ++FK  D D  G +T EEL+Q  +  G+R S +  ++ + A DAD +GT+   E
Subjt:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE

AT5G19360.1 calcium-dependent protein kinase 341.1e-0632.91Show/hide
Query:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE
        M N K  + + +    SE++   L ++FK  D D  G +T EEL+Q  +  G+R S +  ++ + A DAD +GT+   E
Subjt:  MGNSKSKSYKRVLVPFSEDQ---LADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTAAAAGTTACAAACGAGTTCTGGTTCCATTCTCAGAAGACCAATTGGCCGACGTGTTCAAAAACCACGACCGAGACGGAGATGGGAAGCTAAC
AAAGGAGGAATTGAAGCAAGCCTTCAGCTATATGGGCTCACGCTTTAGTGCCTTTAGAGCCGAAGAAGCCCTACGCGCCGTCGATGCCGACCGCGACGGTACCGTCAGCA
TGGACGAGATGAAGAAGCTAATTCAGTATACCAAAGGTCGTAAATACACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
CACACACAAACATCGTTCTTTTTGGATGGGGAATTCCAAAAGTAAAAGTTACAAACGAGTTCTGGTTCCATTCTCAGAAGACCAATTGGCCGACGTGTTCAAAAACCACG
ACCGAGACGGAGATGGGAAGCTAACAAAGGAGGAATTGAAGCAAGCCTTCAGCTATATGGGCTCACGCTTTAGTGCCTTTAGAGCCGAAGAAGCCCTACGCGCCGTCGAT
GCCGACCGCGACGGTACCGTCAGCATGGACGAGATGAAGAAGCTAATTCAGTATACCAAAGGTCGTAAATACACTCTTTGTTAAAACTACATATATGTTGTTACTTTTTT
TCACCTATTTCAAGTTAATTCTTGTTCATGGGTTCGTATGTGTATTAACATGTGTCTTGGACGGCGAATAAG
Protein sequenceShow/hide protein sequence
MGNSKSKSYKRVLVPFSEDQLADVFKNHDRDGDGKLTKEELKQAFSYMGSRFSAFRAEEALRAVDADRDGTVSMDEMKKLIQYTKGRKYTLC