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Tan0008549 (gene) of Snake gourd v1 genome

Gene IDTan0008549
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:108891997..108892269
RNA-Seq ExpressionTan0008549
SyntenyTan0008549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591952.1 hypothetical protein SDJN03_14298, partial [Cucurbita argyrosperma subsp. sororia]8.0e-0746.88Show/hide
Query:  MNS--KTTSRILLIVIVMVALSIV-LLPMAVKANVP-----SECVKGCLRSLSSLTPGYCQTICEAEF-----PPRRHRRTPPRANV-VDVDVDVD
        MNS   T  R+L++V +MVAL IV LLPMA +A VP     S+C++GC +SL+ LT GYC T+C AEF      P  H      A+V VD    VD
Subjt:  MNS--KTTSRILLIVIVMVALSIV-LLPMAVKANVP-----SECVKGCLRSLSSLTPGYCQTICEAEF-----PPRRHRRTPPRANV-VDVDVDVD

KAG6607883.1 hypothetical protein SDJN03_01225, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1052.11Show/hide
Query:  MNSKTTSRILLIVIVMVALSIVLLPMAVKANVPS-----ECVKGCLRSLSSLTPGYCQTICEAEFPPRRHR
        MNSKTTS +L+I+  + A++IVLLPM  +A++P+     +C+K CL SL SL P YC  +C+AEFPP RH+
Subjt:  MNSKTTSRILLIVIVMVALSIVLLPMAVKANVPS-----ECVKGCLRSLSSLTPGYCQTICEAEFPPRRHR

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAAAAACAACATCGAGAATACTTCTAATCGTCATCGTGATGGTTGCTTTGAGCATCGTCTTGCTTCCAATGGCAGTGAAGGCGAATGTTCCATCCGAATGCGT
CAAGGGTTGCTTGAGGTCATTGTCAAGTTTAACACCTGGTTATTGCCAAACTATTTGTGAAGCGGAGTTCCCTCCACGAAGACACCGAAGGACTCCGCCTCGTGCTAATG
TTGTTGATGTTGATGTTGATGTCGATGTTAATGTCGTTAATGTACCAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAAAAACAACATCGAGAATACTTCTAATCGTCATCGTGATGGTTGCTTTGAGCATCGTCTTGCTTCCAATGGCAGTGAAGGCGAATGTTCCATCCGAATGCGT
CAAGGGTTGCTTGAGGTCATTGTCAAGTTTAACACCTGGTTATTGCCAAACTATTTGTGAAGCGGAGTTCCCTCCACGAAGACACCGAAGGACTCCGCCTCGTGCTAATG
TTGTTGATGTTGATGTTGATGTCGATGTTAATGTCGTTAATGTACCAAACTAG
Protein sequenceShow/hide protein sequence
MNSKTTSRILLIVIVMVALSIVLLPMAVKANVPSECVKGCLRSLSSLTPGYCQTICEAEFPPRRHRRTPPRANVVDVDVDVDVNVVNVPN