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Tan0008554 (gene) of Snake gourd v1 genome

Gene IDTan0008554
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43313364..43313579
RNA-Seq ExpressionTan0008554
SyntenyTan0008554
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]9.7e-0850.72Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRG
        +SWLIC+V +SMLV  Q+V A   +LK  + C+ P+PPPSCS    +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-0849.3Show/hide
Query:  ICLVLVSMLVTGQKVAADR------TYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG
        ICL L++ML+T Q+V  ++       YLK ++C+ PNPP  CS    +G   V AN Y RGCSAI+RCRGG
Subjt:  ICLVLVSMLVTGQKVAADR------TYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]5.5e-1158.57Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICLVL+ MLV  Q VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]2.7e-1057.14Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC+VL+SMLV  Q+VA++  +LK  D C QPNPP  CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]2.0e-1361.43Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC+V +SMLV G  VAA++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein3.1e-1260Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICL L+ MLV GQ+VAA+  +LK +D CNQP+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein4.7e-0850.72Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRG
        +SWLIC+V +SMLV  Q+V A   +LK  + C+ P+PPPSCS    +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRG

A0A6J1G7J2 protein RALF-like 102.7e-1158.57Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICLVL+ MLV  Q VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG

B2Y4P6 Putative rapid alkalinization factor (RALF) family protein1.8e-0744.29Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL+++S  VT + V + R Y++   +  C  PNPPP C PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

D7L1Y4 Uncharacterized protein1.8e-0744.29Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL+++S  VT + V + R Y++   +  C  PNPPP C PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 121.0e-0740Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++W+I L+++  +V  + V + R Y++   +  C  PNPPP C+PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 139.1e-0941.43Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL+++   V  + V + R Y++   +  C  PNPPP C+PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

O64466 Protein RALF-like 111.8e-0942.86Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL+++   V  + V + R Y++   +  C  PNPPP C+PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

O65919 Protein RALF-like 106.5e-0740.3Show/hide
Query:  LICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        +ICL+++   V    V + R +L    +  C  PNPPP C PP  +   P  AN Y RGCS I RC+
Subjt:  LICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 255.0e-0746.48Show/hide
Query:  MKQSWLICLVLVSMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLVSMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 104.6e-0840.3Show/hide
Query:  LICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        +ICL+++   V    V + R +L    +  C  PNPPP C PP  +   P  AN Y RGCS I RC+
Subjt:  LICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 111.3e-1042.86Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL+++   V  + V + R Y++   +  C  PNPPP C+PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 127.2e-0940Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++W+I L+++  +V  + V + R Y++   +  C  PNPPP C+PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 136.5e-1041.43Show/hide
Query:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL+++   V  + V + R Y++   +  C  PNPPP C+PP  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 253.6e-0846.48Show/hide
Query:  MKQSWLICLVLVSMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLVSMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTGTTAGCATGTTAGTGACAGGACAAAAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTCCACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTGTTAGCATGTTAGTGACAGGACAAAAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTCCACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLVSMLVTGQKVAADRTYLKLVDCNQPNPPPSCSPPNGEGSTPVSANAYTRGCSAINRCRGG