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Tan0008576 (gene) of Snake gourd v1 genome

Gene IDTan0008576
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG05:11756086..11756463
RNA-Seq ExpressionTan0008576
SyntenyTan0008576
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]6.2e-3461.11Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSY-SIGGLINFLFRQLTTESTR
        MEW  PKRRGPEWKQGW GQTL S+S+PP  LLTIFGIVIVLLWFSQ+TG++AQ+ ++  NFQL L +LP L++FF++ Y S GG  NF  R+      R
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSY-SIGGLINFLFRQLTTESTR

Query:  RGASPWTIAILVPLILVLLYFQPSFH
         G SPW +AIL+ L+LVLL +Q SFH
Subjt:  RGASPWTIAILVPLILVLLYFQPSFH

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-4375.59Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTL-GSVSSPPPQLLTIFGIVIVLLWFSQH-TGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTEST
        MEWL+PKRRGPEWKQ W GQTL GSVSSPPPQLLTIFGIVIVLLWFSQ  TG++ QM+RS +NFQL+LFLLP LV+FF+SSYS+ GLIN    +  T S 
Subjt:  MEWLQPKRRGPEWKQGWAGQTL-GSVSSPPPQLLTIFGIVIVLLWFSQH-TGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTEST

Query:  RRGASPWTIAILVPLILVLLYFQPSFH
        RRGASP TI ILV LILVLLYF+PSFH
Subjt:  RRGASPWTIAILVPLILVLLYFQPSFH

KDP27587.1 hypothetical protein JCGZ_19592 [Jatropha curcas]5.3e-3357.48Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTR-
        MEW  PKRRGP+WKQGWAGQT+ S+S+PPP LLTIFGIVI+LLW SQ+TG++AQ+  S  NFQL +FLLP L++  L+  S   ++ F  RQ   +S R 
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTR-

Query:  -RGASPWTIAILVPLILVLLYFQPSFH
          G+SPW +AI V ++LVLL +Q SFH
Subjt:  -RGASPWTIAILVPLILVLLYFQPSFH

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]1.1e-3367.97Show/hide
Query:  MEWLQPKRRGPEWKQG--WAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQ-HTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTES
        M+   PKRRGPEWK+G    GQTL SVS PP QLL IFGIVIVLLWFSQ + GHEAQ+ RS   FQL LFLLP  V+FF+ SYS   LINF FR+  T  
Subjt:  MEWLQPKRRGPEWKQG--WAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQ-HTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTES

Query:  TRRGASPWTIAILVPLILVLLYFQPSFH
         +RGASPWTIAILV LILVLLY+Q SFH
Subjt:  TRRGASPWTIAILVPLILVLLYFQPSFH

XP_022763101.1 uncharacterized protein LOC111308773 [Durio zibethinus]4.0e-3357.14Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR
        MEW+ P+RRGP+WKQGW GQTL SVS+PP  LLTIFGIV+VLLW SQ+TG++A+++ +  NFQL + +LP L++FF+ S+S  G + F  ++L  E+  R
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR

Query:  -GASPWTIAILVPLILVLLYFQPSFH
         G SPW IAILV ++LVLL +Q SFH
Subjt:  -GASPWTIAILVPLILVLLYFQPSFH

TrEMBL top hitse value%identityAlignment
A0A067JUL1 Uncharacterized protein2.6e-3357.48Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTR-
        MEW  PKRRGP+WKQGWAGQT+ S+S+PPP LLTIFGIVI+LLW SQ+TG++AQ+  S  NFQL +FLLP L++  L+  S   ++ F  RQ   +S R 
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTR-

Query:  -RGASPWTIAILVPLILVLLYFQPSFH
          G+SPW +AI V ++LVLL +Q SFH
Subjt:  -RGASPWTIAILVPLILVLLYFQPSFH

A0A0A0LLH8 Uncharacterized protein5.1e-3467.97Show/hide
Query:  MEWLQPKRRGPEWKQG--WAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQ-HTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTES
        M+   PKRRGPEWK+G    GQTL SVS PP QLL IFGIVIVLLWFSQ + GHEAQ+ RS   FQL LFLLP  V+FF+ SYS   LINF FR+  T  
Subjt:  MEWLQPKRRGPEWKQG--WAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQ-HTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTES

Query:  TRRGASPWTIAILVPLILVLLYFQPSFH
         +RGASPWTIAILV LILVLLY+Q SFH
Subjt:  TRRGASPWTIAILVPLILVLLYFQPSFH

A0A5N6QRB9 Uncharacterized protein6.3e-3257.94Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR
        MEW   KRRGPEWKQGW GQTLGS+S+PP  LLTIFGIVIVLLW SQ T ++AQ+  +  NFQL +FLLP L++ F+++YS GG  +    +   ES +R
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR

Query:  -GASPWTIAILVPLILVLLYFQPSFH
         G  PW +AILV ++LVLL +Q SFH
Subjt:  -GASPWTIAILVPLILVLLYFQPSFH

A0A6P6AE81 uncharacterized protein LOC1113087732.0e-3357.14Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR
        MEW+ P+RRGP+WKQGW GQTL SVS+PP  LLTIFGIV+VLLW SQ+TG++A+++ +  NFQL + +LP L++FF+ S+S  G + F  ++L  E+  R
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR

Query:  -GASPWTIAILVPLILVLLYFQPSFH
         G SPW IAILV ++LVLL +Q SFH
Subjt:  -GASPWTIAILVPLILVLLYFQPSFH

W9QKI2 Uncharacterized protein6.3e-3254.26Show/hide
Query:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR
        MEW  PKRRGPEWKQGW  QT+ S+S PP  LLTIF IV+VLLW SQ+TG++AQ+ ++ ANFQ  LFL P L++ F++SYS     NF  R++  E++ +
Subjt:  MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRR

Query:  ----GASPWTIAILVPLILVLLYFQPSFH
            G+SPW +AI V L+L+LL +Q SFH
Subjt:  ----GASPWTIAILVPLILVLLYFQPSFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19875.1 unknown protein2.5e-0427.18Show/hide
Query:  LGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRRGASPWTIAILVPLILVLLYFQ
        L  +S P P L  +F +V  +L F+ +   E+ +  ++ + +LV    P  ++  +  +S GGL  ++         R G+SPW +A ++ LIL ++ +Q
Subjt:  LGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRRGASPWTIAILVPLILVLLYFQ

Query:  PSF
          F
Subjt:  PSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGTTACAACCAAAAAGGAGAGGTCCAGAGTGGAAACAGGGATGGGCAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCACCTCAATTGCTCACTATTTTTGG
CATTGTCATTGTCTTGCTTTGGTTCTCTCAACACACAGGCCATGAAGCTCAAATGTATAGGTCAGTTGCCAATTTCCAGTTGGTTCTTTTCTTGTTGCCCTTCTTGGTGG
TTTTCTTCCTGTCTTCATATTCCATCGGTGGATTGATCAACTTTCTATTTCGGCAACTGACAACCGAATCGACTCGACGAGGTGCCTCGCCATGGACCATTGCCATTTTG
GTCCCTCTCATTTTGGTTTTGCTTTATTTCCAACCCTCGTTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGTTACAACCAAAAAGGAGAGGTCCAGAGTGGAAACAGGGATGGGCAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCACCTCAATTGCTCACTATTTTTGG
CATTGTCATTGTCTTGCTTTGGTTCTCTCAACACACAGGCCATGAAGCTCAAATGTATAGGTCAGTTGCCAATTTCCAGTTGGTTCTTTTCTTGTTGCCCTTCTTGGTGG
TTTTCTTCCTGTCTTCATATTCCATCGGTGGATTGATCAACTTTCTATTTCGGCAACTGACAACCGAATCGACTCGACGAGGTGCCTCGCCATGGACCATTGCCATTTTG
GTCCCTCTCATTTTGGTTTTGCTTTATTTCCAACCCTCGTTTCATTGA
Protein sequenceShow/hide protein sequence
MEWLQPKRRGPEWKQGWAGQTLGSVSSPPPQLLTIFGIVIVLLWFSQHTGHEAQMYRSVANFQLVLFLLPFLVVFFLSSYSIGGLINFLFRQLTTESTRRGASPWTIAIL
VPLILVLLYFQPSFH