; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008593 (gene) of Snake gourd v1 genome

Gene IDTan0008593
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsequence-specific DNA binding transcription factors;transcription regulators
Genome locationLG08:8453900..8454419
RNA-Seq ExpressionTan0008593
SyntenyTan0008593
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]1.7e-3780.95Show/hide
Query:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT
        MRSIHSFRSR+ AT+IS LKP+R+RR+KLLHLPKH SSS +SA +T  T PSAAMHKRLR+LQRLVPGHTHET+LNHLFQRTADYI ALQLKLN+LKDLT
Subjt:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT

Query:  SLYGL
        S YGL
Subjt:  SLYGL
KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-3676.19Show/hide
Query:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT
        MRSIHSFR R+ ATS +NLKPTR+RRLKL+HLPK+ +SS+  + + TGT PS AMHKRLR+LQRLVPGH H+TDLNHLFQRTADYI ALQLKLN+LKDLT
Subjt:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT

Query:  SLYGL
        S YGL
Subjt:  SLYGL
TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein8.4e-3880.95Show/hide
Query:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT
        MRSIHSFRSR+ AT+IS LKP+R+RR+KLLHLPKH SSS +SA +T  T PSAAMHKRLR+LQRLVPGHTHET+LNHLFQRTADYI ALQLKLN+LKDLT
Subjt:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT

Query:  SLYGL
        S YGL
Subjt:  SLYGL
A0A1R3KLV4 Uncharacterized protein6.1e-0431.43Show/hide
Query:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT
        MRS  S R R+       L   RK R++ ++L   P+++     ++   +   ++ ++L +LQR++P   +E +++ LFQ TADYIF L+ K+++L++L+
Subjt:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT

Query:  SLYGL
        + YG+
Subjt:  SLYGL
A0A7N0RGC2 Uncharacterized protein3.6e-0436.19Show/hide
Query:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT
        M S+ S+  R+ +      K  R   LK    P+ P          T  +P+  + +RLR+LQR+VPG +H  D+  LF+RTADYI  L+ K+  L++L+
Subjt:  MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLT

Query:  SLYGL
        S  GL
Subjt:  SLYGL
A0A7N2L281 Uncharacterized protein3.6e-0440.96Show/hide
Query:  RKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSLYGL
        +K+RL+ L L K+      +AV+TT       + ++LR LQ+++PG  +E DL  LF R A+YI +LQ+K+N+LK++++LYG+
Subjt:  RKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSLYGL
SwissProt top hitse value%identityAlignment
O22901 Transcription factor UPBEAT14.5e-0438.46Show/hide
Query:  PSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSL
        P  A+H+R++ L+ LVP       L+ LF++TADYI AL++K+ V++ +  +
Subjt:  PSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSL
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators3.2e-0538.46Show/hide
Query:  PSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSL
        P  A+H+R++ L+ LVP       L+ LF++TADYI AL++K+ V++ +  +
Subjt:  PSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCATCCACTCATTCCGATCAAGAAAACCAGCCACCTCCATTTCCAATCTCAAACCAACAAGAAAGAGAAGACTAAAGCTTCTTCACCTCCCAAAACATCCCTC
CTCCTCCGCCATCTCCGCCGTTTCCACCACCGGAACCGCCCCCTCCGCCGCCATGCACAAGAGGCTGAGAGATCTGCAGAGGCTGGTCCCCGGCCACACCCATGAAACTG
ACCTCAACCACTTGTTTCAAAGAACTGCTGATTATATCTTCGCTTTACAACTTAAGCTCAACGTCCTTAAAGATCTCACTTCTCTTTATGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTTCTCTATCTCTCTTCATATTAGGAAGCAAATTAGCCCACGCAAATGAGGTCCATCCACTCATTCCGATCAAGAAAACCAGCCACCTCCATTTCCAATCTCAAA
CCAACAAGAAAGAGAAGACTAAAGCTTCTTCACCTCCCAAAACATCCCTCCTCCTCCGCCATCTCCGCCGTTTCCACCACCGGAACCGCCCCCTCCGCCGCCATGCACAA
GAGGCTGAGAGATCTGCAGAGGCTGGTCCCCGGCCACACCCATGAAACTGACCTCAACCACTTGTTTCAAAGAACTGCTGATTATATCTTCGCTTTACAACTTAAGCTCA
ACGTCCTTAAAGATCTCACTTCTCTTTATGGCCTTTGAGTCATTTCCATATTATTATTATTTCAATTAGGTTCTTTTGTATTCTATATATGTTTACTTCTATATATATAT
ATAAAAATGTTATATTTATGCAATTATTGTTGTTGTAAATGTAATATAATACCCTTTTATCTTACCACCTTCATTCTCTA
Protein sequenceShow/hide protein sequence
MRSIHSFRSRKPATSISNLKPTRKRRLKLLHLPKHPSSSAISAVSTTGTAPSAAMHKRLRDLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNVLKDLTSLYGL