CuGenDBv2

Gene ID	Tan0008626
Organism	Trichosanthes anguina (Snake gourd v1)
Description	TATA-box-binding protein
Genome location	LG09:62259953..62263075
RNA-Seq Expression	Tan0008626
Synteny	Tan0008626
Gene Ontology terms	GO:0006352 - DNA-templated transcription, initiation (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR000814 - TATA-box binding protein IPR012295 - TBP domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA3472780.1 TATA-box-binding protein isoform X1 [Gossypium australe]

9.1e-37

57.06

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MRIREPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                     VR+ETYTAFENIYPVLTEFRKNQQW
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

KAF7822450.1 TATA-box-binding protein [Senna tora]

5.3e-37

57.65

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MRIREPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                     VR+ETYTAFENIYPVLTEFRKNQQW
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

KAG2536276.1 hypothetical protein PVAP13_9NG246300 [Panicum virgatum]

6.3e-38

57.07

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIVLTGAK +S                 F Y ++ L L    L  F+   +L VREETYTAFENIYPVLTEFRK QQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

PLY80327.1 hypothetical protein LSAT_7X91520 [Lactuca sativa]

3.1e-37

58.33

Show/hide

Query:  MRIREPKTTALIFASGKM------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKKT
        MRIREPKTTALIFASGKM                        SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK  
Subjt:  MRIREPKTTALIFASGKM------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKKT

Query:  SLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                   VR+ETYTAFENIYPVLTEFRKNQQW
Subjt:  SLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

TKY65707.1 TATA-box-binding protein [Spatholobus suberectus]

1.2e-36

57.06

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MR+REPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                     VR+ETYTAFENIYPVLTEFRKNQQW
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

TrEMBL top hits

e value

%identity

Alignment

A0A2J6KZ73 Uncharacterized protein

1.5e-37

58.33

Show/hide

Query:  MRIREPKTTALIFASGKM------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKKT
        MRIREPKTTALIFASGKM                        SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK  
Subjt:  MRIREPKTTALIFASGKM------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKKT

Query:  SLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                   VR+ETYTAFENIYPVLTEFRKNQQW
Subjt:  SLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

A0A5B6VU82 TATA-box-binding protein isoform X1

4.4e-37

57.06

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MRIREPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                     VR+ETYTAFENIYPVLTEFRKNQQW
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

A0A6J5V8H6 Uncharacterized protein

3.7e-36

57.06

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MRIREPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW
                                                     VR ETY AFENIYPVLTEFRKNQQW
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

A0A803R3N6 Uncharacterized protein

2.2e-36

57.99

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MRIREPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
                                                     VREETYTAFENIYPVLTEFRKNQQ
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

I1L727 Uncharacterized protein

4.8e-36

57.4

Show/hide

Query:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
        MRIREPKTTALIFASGKM                          SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Subjt:  MRIREPKTTALIFASGKM--------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK

Query:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
                                                     VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  KTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

SwissProt top hits

e value

%identity

Alignment

P26357 TATA-box-binding protein

2.7e-36

51.63

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIV+TGAK                                             VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

P48511 TATA-box-binding protein

3.2e-37

53.26

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIVLTGAK                                             VREETYTAFENIYPVLTEFRKNQQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

P93348 TATA-box-binding protein

7.2e-37

52.72

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIVLTGAK                                             VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

Q42808 TATA-box-binding protein

1.6e-36

52.17

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIR+PKTTALIFASGKM                                         SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIVLTGAK                                             VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

Q8W0W4 TATA-binding protein 2

8.0e-36

52.17

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIVLTGAK                                             VR+ETYTAFENIYPVLTEFRK QQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G55520.1 TATA binding protein 2

1.5e-34

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIV+TGAK                                             +REETYTAFENIYPVL EFRK QQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

AT1G55520.2 TATA binding protein 2

1.5e-34

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIV+TGAK                                             +REETYTAFENIYPVL EFRK QQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

AT3G13445.1 TATA binding protein 1

1.0e-33

48.91

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ
        LLIFVSGKIV+TGAK                                             +R+ETY AFENIYPVL+EFRK QQ
Subjt:  LLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALSKFLDLDILLVREETYTAFENIYPVLTEFRKNQQ

AT3G13445.2 TATA binding protein 1

9.7e-29

61.02

Show/hide

Query:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV
        MRIREPKTTALIFASGKM                                         SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIV
Subjt:  MRIREPKTTALIFASGKM-----------------------------------------SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIV

Query:  LLIFVSGKIVLTGAKKTS
        LLIFVSGKIV+TGAK  S
Subjt:  LLIFVSGKIVLTGAKKTS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCATCTGGAAAGATGTCATGCGATGTTAAGTTCCCCATAAGGCTTGAGGGTCTTGCATATTCTCACGGTGC
CTTTTCAAGTTATGAACCAGAGTTGTTTCCTGGATTGATTTATCGGATGAAACAACCAAAGATTGTGCTCCTTATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTA
AGAAAACAAGCTTAATTTTCAAAAAATCAAAACCAAAAAACCAAATAGTTATTAAATGGGGCTTTAGTTATTCTATTTTGGGCTTGAGTTTATTCTGTAGTGCGCTTTCC
AAGTTCCTTGACTTAGATATTTTACTGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGGTAAGATGC
TTCAACCATAGTCATTTTATTGAAACACTTTTCTCTCCTATTTATTCTTTTGGACTGGATGATTTATTGGTATGTGGAACTGAGTCTGAATTTCTGTGCTGGAAGAAATG
AATAATCAATCTAAACTCTCTCCAAAATAAAAACAAGTCTAAAGGAAGTTGTGTTTGCAGATTTTTTGGTTTGGGACTAGCC

Protein sequence

Show/hide protein sequence

MRIREPKTTALIFASGKMSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKKTSLIFKKSKPKNQIVIKWGFSYSILGLSLFCSALS
KFLDLDILLVREETYTAFENIYPVLTEFRKNQQW

Tan0008626 (gene) of Snake gourd v1 genome