; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008645 (gene) of Snake gourd v1 genome

Gene IDTan0008645
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationLG01:88412809..88413042
RNA-Seq ExpressionTan0008645
SyntenyTan0008645
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]8.6e-1868.83Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML+SF  RFIL L +VL+L S S++AAR+P  YWEQMLPKKLP+PSSAPSKGTN++  SSSK +KV+GNLP KDG V
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

KAF4402307.1 hypothetical protein G4B88_003228 [Cannabis sativa]2.4e-1258.44Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML S+R ++ LI +++++     SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNS+ +SSSK VK D NLP  DGKV
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]7.0e-2077.92Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLP--MKDG
        M +SFR RFI IL++VL+LAS SSEAAR+P +YWEQMLPKKLPTPSSAPSKGTNS+ SSS KTVKVDGNLP  +KDG
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLP--MKDG

KAG6624344.1 hypothetical protein CIPAW_16G019900 [Carya illinoinensis]3.7e-1366.23Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML S+R +  LILM +L+     SEA+RLP+EYWEQMLPKKLP+PSS+PSKGTNS  SSSS T K DG+LP  DGKV
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]1.1e-1767.53Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML++F  RFIL L ++L+L S SS+AAR+P  YWEQMLPKKLP+PSSAPSKGTN++  SSSK +KV+GNLP KDG V
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

TrEMBL top hitse value%identityAlignment
A0A2P5W5E0 Uncharacterized protein5.8e-1261.04Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        MLVS R + +LIL ++  +    SEA+R P+ YWEQMLPKKLPTPSS+PSKGTNS+  S+SK VK D +LP  DGKV
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR55.4e-1867.53Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML++F  RFIL L ++L+L S SS+AAR+P  YWEQMLPKKLP+PSSAPSKGTN++  SSSK +KV+GNLP KDG V
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

A0A7J6I408 Uncharacterized protein1.2e-1258.44Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML S+R ++ LI +++++     SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNS+ +SSSK VK D NLP  DGKV
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

A0A7N2MJW9 Uncharacterized protein2.0e-1261.25Show/hide
Query:  MLVSFR---LRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML S+R   L F L+  +VL      SEA+RLP+EYWEQMLPKKLP PSS+PSKGTNS+  SSSK +K + NLP  DGKV
Subjt:  MLVSFR---LRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

A0A803PR73 Uncharacterized protein3.4e-1257.14Show/hide
Query:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV
        ML S+R ++ L  +++++     SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNS+ +SSSK VK D NLP  DGKV
Subjt:  MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTTTCTTTCAGGCTTAGATTCATTCTGATCTTAATGGTTGTTCTCTCTCTCGCCTCCACGTCGTCGGAGGCGGCGAGGTTGCCGAGGGAGTATTGGGAGCAGAT
GTTGCCAAAGAAGCTACCGACGCCATCCTCGGCACCGTCGAAAGGGACGAATTCCATGGATTCTTCGTCTTCTAAAACTGTGAAAGTTGATGGGAACTTGCCCATGAAAG
ACGGGAAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTTTCTTTCAGGCTTAGATTCATTCTGATCTTAATGGTTGTTCTCTCTCTCGCCTCCACGTCGTCGGAGGCGGCGAGGTTGCCGAGGGAGTATTGGGAGCAGAT
GTTGCCAAAGAAGCTACCGACGCCATCCTCGGCACCGTCGAAAGGGACGAATTCCATGGATTCTTCGTCTTCTAAAACTGTGAAAGTTGATGGGAACTTGCCCATGAAAG
ACGGGAAGGTTTAG
Protein sequenceShow/hide protein sequence
MLVSFRLRFILILMVVLSLASTSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSMDSSSSKTVKVDGNLPMKDGKV