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Tan0008689 (gene) of Snake gourd v1 genome

Gene IDTan0008689
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationLG09:70632968..70634093
RNA-Seq ExpressionTan0008689
SyntenyTan0008689
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]1.4e-1657.78Show/hide
Query:  SCCD-ADTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG-------------------NFAPALPVCLTQVIY
        SCCD ADTGPGPY VGPP CDPMQHGQ+ PYP IVPPQGETK + VPP  +TK RG                   ++A AL V LTQVI+
Subjt:  SCCD-ADTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG-------------------NFAPALPVCLTQVIY

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]1.4e-1374.51Show/hide
Query:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN
        DTGPGPY V PPMCDPMQHGQ+ PYP IVPPQGETK + VPP  +TK RG+
Subjt:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1455.81Show/hide
Query:  MCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG---------------------------NFAPALPVCLTQVIYWVPISM
        MCDPMQHGQS PY SI+PPQGETKFQ V PPRET S+G                           +FAPAL V LTQVI+WVPISM
Subjt:  MCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG---------------------------NFAPALPVCLTQVIYWVPISM

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2160.2Show/hide
Query:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG---------------------------NFAPALPVCLTQVIYWVPISM
        DTGPGPYPV PPMCDPMQHGQS PY SI+PPQGETKFQ V PPRET S+G                           +FAPAL V LTQVI+WVPISM
Subjt:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG---------------------------NFAPALPVCLTQVIYWVPISM

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]4.1e-1682.35Show/hide
Query:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN
        DTGPGPYPV PPMCDPMQHGQS PY SI+PPQGETK QIV PPRET S+G+
Subjt:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein7.0e-1474.51Show/hide
Query:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN
        DTGPGPY V PPMCDPMQHGQ+ PYP IVPPQGETK + VPP  +TK RG+
Subjt:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN

A0A5A7UV38 Uncharacterized protein6.7e-1757.78Show/hide
Query:  SCCD-ADTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG-------------------NFAPALPVCLTQVIY
        SCCD ADTGPGPY VGPP CDPMQHGQ+ PYP IVPPQGETK + VPP  +TK RG                   ++A AL V LTQVI+
Subjt:  SCCD-ADTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRG-------------------NFAPALPVCLTQVIY

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like2.0e-1682.35Show/hide
Query:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN
        DTGPGPYPV PPMCDPMQHGQS PY SI+PPQGETK QIV PPRET S+G+
Subjt:  DTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCCTCGCTCCTCCATTTGACTTCACACATATTCTCCTTGAGGCAGTTGAGCAGTAATAAGAATGTATCTTGTTGTTATGCAGTTGGAGTTATAATTTTGGTGGT
GTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTACCCAGTTGGCCCACCTATGTGTGATCCAATGCAACATGGTCAGTCTCACCCATACCCTTCAATTGTACCTCCTC
AAGGGGAAACCAAGTTTCAAATTGTACCTCCTCCAAGGGAAACCAAGTCTAGAGGCAACTTTGCCCCTGCACTTCCAGTTTGTCTGACACAAGTTATCTACTGGGTTCCC
ATCAGCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCCTCGCTCCTCCATTTGACTTCACACATATTCTCCTTGAGGCAGTTGAGCAGTAATAAGAATGTATCTTGTTGTTATGCAGTTGGAGTTATAATTTTGGTGGT
GTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTACCCAGTTGGCCCACCTATGTGTGATCCAATGCAACATGGTCAGTCTCACCCATACCCTTCAATTGTACCTCCTC
AAGGGGAAACCAAGTTTCAAATTGTACCTCCTCCAAGGGAAACCAAGTCTAGAGGCAACTTTGCCCCTGCACTTCCAGTTTGTCTGACACAAGTTATCTACTGGGTTCCC
ATCAGCATGTAG
Protein sequenceShow/hide protein sequence
MFASLLHLTSHIFSLRQLSSNKNVSCCYAVGVIILVVSCCDADTGPGPYPVGPPMCDPMQHGQSHPYPSIVPPQGETKFQIVPPPRETKSRGNFAPALPVCLTQVIYWVP
ISM