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Tan0008723 (gene) of Snake gourd v1 genome

Gene IDTan0008723
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionthionin-like protein 2
Genome locationLG06:2583900..2585204
RNA-Seq ExpressionTan0008723
SyntenyTan0008723
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]4.0e-4172.03Show/hide
Query:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        KWALMAWL++ S  + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACI+PS+PID    +++  + Q Q+NHFFC LGCAASSCT FSTKQNP 
Subjt:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCSMN
        E+KV  CVDSC QTCSM+
Subjt:  EKKVGSCVDSCYQTCSMN

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]7.3e-4373.73Show/hide
Query:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        KWALMAWL++ S  + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACI+PS+PID+ ++     + Q Q+NHFFC LGCAASSCT FSTKQNP 
Subjt:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCSMN
        E+KVG CVDSC QTCSMN
Subjt:  EKKVGSCVDSCYQTCSMN

XP_022146010.1 thionin-like protein 2 [Momordica charantia]4.5e-4066.94Show/hide
Query:  RRGKWAL---MAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFS
        RRGKW L   M WLVV+SS+M T +STSFQECY TCFVICAITPG +FS+CPL+CLQACIIPS+PID+        + +   NHFFC LGCAA+ CTNF+
Subjt:  RRGKWAL---MAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFS

Query:  TKQNPAEKKVGSCVDSCYQTCSMN
        T  NPAEKKVG CVDSC +TCSM+
Subjt:  TKQNPAEKKVGSCVDSCYQTCSMN

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]2.2e-3970.83Show/hide
Query:  RGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQN
        + K  LMAWLV+  S + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACIIPS+PI N   +++    + Q+N FFC LGCAASSCT FST QN
Subjt:  RGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQN

Query:  PAEKKVGSCVDSCYQTCSMN
        PAEKKVGSCVDSC +TCSM+
Subjt:  PAEKKVGSCVDSCYQTCSMN

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]1.5e-4071.19Show/hide
Query:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        KWAL+AWL++  S + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACIIPS+PIDN +++        ++N FFC LGCA SSCT FSTKQNPA
Subjt:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCSMN
        EK+VG+CVDSC QTCSM+
Subjt:  EKKVGSCVDSCYQTCSMN

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein3.6e-4373.73Show/hide
Query:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        KWALMAWL++ S  + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACI+PS+PID+ ++     + Q Q+NHFFC LGCAASSCT FSTKQNP 
Subjt:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCSMN
        E+KVG CVDSC QTCSMN
Subjt:  EKKVGSCVDSCYQTCSMN

A0A1S3CDU4 thionin-like protein 21.9e-4172.03Show/hide
Query:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        KWALMAWL++ S  + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACI+PS+PID    +++  + Q Q+NHFFC LGCAASSCT FSTKQNP 
Subjt:  KWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCSMN
        E+KV  CVDSC QTCSM+
Subjt:  EKKVGSCVDSCYQTCSMN

A0A6J1CW29 thionin-like protein 22.2e-4066.94Show/hide
Query:  RRGKWAL---MAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFS
        RRGKW L   M WLVV+SS+M T +STSFQECY TCFVICAITPG +FS+CPL+CLQACIIPS+PID+        + +   NHFFC LGCAA+ CTNF+
Subjt:  RRGKWAL---MAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFS

Query:  TKQNPAEKKVGSCVDSCYQTCSMN
        T  NPAEKKVG CVDSC +TCSM+
Subjt:  TKQNPAEKKVGSCVDSCYQTCSMN

A0A6J1GMH5 thionin-like protein 21.1e-3970.83Show/hide
Query:  RGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQN
        + K  LMAWLV+  S + T  STSFQECY TCFVICAITPGVAFSDCPLRCLQACIIPS+PI N   +++    + Q+N FFC LGCAASSCT FST QN
Subjt:  RGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQN

Query:  PAEKKVGSCVDSCYQTCSMN
        PAEKKVGSCVDSC +TCSM+
Subjt:  PAEKKVGSCVDSCYQTCSMN

A0A6J1JZ84 thionin-like protein 21.5e-3869.17Show/hide
Query:  RGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQN
        + K  LMAWLV+  S + T  STSFQECY TCF+ICAITPGVAFSDCPLRCLQACIIPS+PI N   ++     + Q+N FFC LGCAASSCT FST++N
Subjt:  RGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQN

Query:  PAEKKVGSCVDSCYQTCSMN
        PAEKKVGSCVDSC +TCSM+
Subjt:  PAEKKVGSCVDSCYQTCSMN

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.9e-0932.76Show/hide
Query:  ALMAWLVVMSSMMRT-GKSTSFQECYFTCFVIC-AITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        A+M  +V+ + + +T  +   F+ECY  C V C A +    +  CP  C + C+    P  +V+ NN      +  + +FC LGCA   C + S+ QNP 
Subjt:  ALMAWLVVMSSMMRT-GKSTSFQECYFTCFVIC-AITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCS
         ++V +CVDSC   C+
Subjt:  EKKVGSCVDSCYQTCS

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.3e-1032.76Show/hide
Query:  ALMAWLVVMSSMMRT-GKSTSFQECYFTCFVIC-AITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA
        A+M  +V+ + + +T  +   F+ECY  C V C A +    +  CP  C + C+    P  +V+ NN      +  + +FC LGCA   C + S+ QNP 
Subjt:  ALMAWLVVMSSMMRT-GKSTSFQECYFTCFVIC-AITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPA

Query:  EKKVGSCVDSCYQTCS
         ++V +CVDSC   C+
Subjt:  EKKVGSCVDSCYQTCS

AT1G12672.1 unknown protein7.6e-0642.86Show/hide
Query:  NTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPAEKKVGSCVDSCYQTCS
        ++TN ++  N ++C LGC+   C + S+ QNP   KV  CVDSC   CS
Subjt:  NTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPAEKKVGSCVDSCYQTCS

AT1G12672.2 unknown protein5.3e-0736.23Show/hide
Query:  CLQACI-IPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPAEKKVGSCVDSCYQTCS
        C++ C+  PS  +D+ N        ++  N ++C LGC+   C + S+ QNP   KV  CVDSC   CS
Subjt:  CLQACI-IPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPAEKKVGSCVDSCYQTCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCAAGAGGAGGGGGAAATGGGCGTTAATGGCGTGGCTGGTAGTGATGAGCTCGATGATGAGGACGGGAAAATCCACTTCTTTTCAAGAGTGCTACTTCACTTG
TTTCGTCATATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCCTTGAGATGCTTACAAGCCTGCATCATTCCCTCTTATCCAATCGACAACGTCAACATTAACA
ACAACACCACCAACCTCCAACTCCAACGCAATCATTTCTTCTGTCACCTCGGCTGCGCAGCTTCTTCTTGTACCAACTTCAGCACCAAGCAAAACCCAGCTGAAAAGAAA
GTGGGGAGCTGTGTGGATTCCTGCTATCAGACATGCTCCATGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATCGATCAATGGAGATCAAGAGGAGGGGGAAATGGGCGTTAATGGCGTGGCTGGTAGTGATGAGCTCGATGATGAGGACGGGAAAATCCACTTCTTTTCAAGAGTGCTAC
TTCACTTGTTTCGTCATATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCCTTGAGATGCTTACAAGCCTGCATCATTCCCTCTTATCCAATCGACAACGTCAA
CATTAACAACAACACCACCAACCTCCAACTCCAACGCAATCATTTCTTCTGTCACCTCGGCTGCGCAGCTTCTTCTTGTACCAACTTCAGCACCAAGCAAAACCCAGCTG
AAAAGAAAGTGGGGAGCTGTGTGGATTCCTGCTATCAGACATGCTCCATGAATTGATCTTCATCTGGAAAATGGAGCCATCCAAAACAACTGGC
Protein sequenceShow/hide protein sequence
MEIKRRGKWALMAWLVVMSSMMRTGKSTSFQECYFTCFVICAITPGVAFSDCPLRCLQACIIPSYPIDNVNINNNTTNLQLQRNHFFCHLGCAASSCTNFSTKQNPAEKK
VGSCVDSCYQTCSMN