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Tan0008748 (gene) of Snake gourd v1 genome

Gene IDTan0008748
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG07:46820485..46821142
RNA-Seq ExpressionTan0008748
SyntenyTan0008748
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]6.5e-3144.39Show/hide
Query:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR
        RV+ H  Q+ +   +L+ +++  +  ST +  T ASGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V KPVC  AT FS AIGTI R
Subjt:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR

Query:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY
        +TIPL  K WSD  K+VRD + D+L                            +YF  D+ K H+ +YV + +  TFKEYR++LY++
Subjt:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]4.3e-3551.88Show/hide
Query:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR
        RV+ H  Q+ +   +L+ +++  +  ST +  T ASGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V KPVC  AT FS AIGTI R
Subjt:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR

Query:  DTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY
        +TIPL  K WSD  K+VRD + D+L +YF  D+ K H+ +YV + +  TFKEYR++LY++
Subjt:  DTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]6.5e-3144.39Show/hide
Query:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR
        RV+ H  Q+ +   +L+ +++  +  ST +  T ASGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V KPVC  AT FS AIGTI R
Subjt:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR

Query:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY
        +TIPL  K WSD  K+VRD + D+L                            +YF  D+ K H+ +YV + +  TFKEYR++LY++
Subjt:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]6.5e-3144.39Show/hide
Query:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR
        RV+ H  Q+ +   +L+ +++  +  ST +  T ASGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V KPVC  AT FS AIGTI R
Subjt:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR

Query:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY
        +TIPL  K WSD  K+VRD + D+L                            +YF  D+ K H+ +YV + +  TFKEYR++LY++
Subjt:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]6.5e-3144.39Show/hide
Query:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR
        RV+ H  Q+ +   +L+ +++  +  ST +  T ASGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V KPVC  AT FS AIGTI R
Subjt:  RVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITR

Query:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY
        +TIPL  K WSD  K+VRD + D+L                            +YF  D+ K H+ +YV + +  TFKEYR++LY++
Subjt:  DTIPLHYKTWSDAPKQVRDSIKDRL---------------------------STYFILDLTKHHINRYVERLISTTFKEYRAELYQY

TrEMBL top hitse value%identityAlignment
A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class2.0e-1738.51Show/hide
Query:  VTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSD
        +T +E+ N+  V+ ST           S S++ ++ RGR  RG+ R IEL+++V  HG+I IEI+E+  KPV T A   +  IGT  R+TIPL  + W  
Subjt:  VTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSD

Query:  APKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY
         P  VR+ + DRL T+F  D T   + +Y+E  +   F+E+RA+L++Y
Subjt:  APKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY

A0A5A7TRX4 DUF4216 domain-containing protein2.8e-1643.1Show/hide
Query:  ASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVER
        +S S GR  RG+ R IEL+++V  HG+I IEI+E+  KPV T A   +  IGT  R+TIPL  + W   P  VR+ + D L T+F  D T   + +Y+E 
Subjt:  ASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVER

Query:  LISTTFKEYRAELYQY
         +  TF+E+RA+L++Y
Subjt:  LISTTFKEYRAELYQY

A0A5A7US78 Uncharacterized protein1.7e-1637.16Show/hide
Query:  VTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSD
        +T +E+ N+  ++ ST           S S++ ++ RGR  RG+ R IEL+++V  HG+I IEI+E+  KPV T     +  IGT  R+TIPL  + W  
Subjt:  VTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSD

Query:  APKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY
         P  VR+ + D L T+F  D T   + +Y+E  +  TF+E+RA L++Y
Subjt:  APKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY

A0A5D3D8C2 CACTA en-spm transposon protein1.3e-1339.45Show/hide
Query:  RARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFK
        R R  SR +ELER+V  +GRIP+ I    +KP+   A  FS AIG   R T P+    W+D  ++  + +K  L  +F+LD     +NR+VE  + TTFK
Subjt:  RARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFK

Query:  EYRAELYQY
        E+RA+ +++
Subjt:  EYRAELYQY

A0A5D3DD82 CACTA en-spm transposon protein1.3e-1339.45Show/hide
Query:  RARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFK
        R R  SR +ELER+V  +GRIP+ I    +KP+   A  FS AIG   R T P+    W+D  ++  + +K  L  +F+LD     +NR+VE  + TTFK
Subjt:  RARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFK

Query:  EYRAELYQY
        E+RA+ +++
Subjt:  EYRAELYQY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATATTAGAGTGATGGTGCATCCAAGTCAAGATTATGATGTAGTTACTGTGTTAGAAGAGGAGAATTCTCTGGAGGTTAATCGTTCGACAGCGCAACGCCATAC
ACGAGCTTCAGGATCTAGATCACGTTCTAGAGTAGCCTCTAGATCGCGAGGCAGGAGGGCGAGAGGGCATAGTCGAAGGATTGAGTTAGAGCGTTATGTCAATGCACATG
GTAGAATACCCATCGAGATCGATGAGAAGGTCGACAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACAATCACCAGAGATACAATTCCACTGCAT
TATAAAACGTGGAGCGACGCCCCAAAGCAAGTTCGAGACAGCATAAAAGATCGACTCTCTACATACTTCATCCTGGATTTGACCAAACATCACATAAATAGATACGTAGA
GCGATTGATATCAACCACATTCAAGGAATATAGGGCAGAATTGTATCAATACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATATTAGAGTGATGGTGCATCCAAGTCAAGATTATGATGTAGTTACTGTGTTAGAAGAGGAGAATTCTCTGGAGGTTAATCGTTCGACAGCGCAACGCCATAC
ACGAGCTTCAGGATCTAGATCACGTTCTAGAGTAGCCTCTAGATCGCGAGGCAGGAGGGCGAGAGGGCATAGTCGAAGGATTGAGTTAGAGCGTTATGTCAATGCACATG
GTAGAATACCCATCGAGATCGATGAGAAGGTCGACAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACAATCACCAGAGATACAATTCCACTGCAT
TATAAAACGTGGAGCGACGCCCCAAAGCAAGTTCGAGACAGCATAAAAGATCGACTCTCTACATACTTCATCCTGGATTTGACCAAACATCACATAAATAGATACGTAGA
GCGATTGATATCAACCACATTCAAGGAATATAGGGCAGAATTGTATCAATACTAG
Protein sequenceShow/hide protein sequence
MWDIRVMVHPSQDYDVVTVLEEENSLEVNRSTAQRHTRASGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLH
YKTWSDAPKQVRDSIKDRLSTYFILDLTKHHINRYVERLISTTFKEYRAELYQY