; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008754 (gene) of Snake gourd v1 genome

Gene IDTan0008754
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosome maturation factor
Genome locationLG07:71706789..71708331
RNA-Seq ExpressionTan0008754
SyntenyTan0008754
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606266.1 hypothetical protein SDJN03_03583, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7493.04Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSS  ILNYDGQDD+KASKSFRFSFP+PSP RQEKFVHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSEHLEIKA+GDELIVPKKGNILAIQSLRNLKEIEKS+SL+SR PRKL DF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
XP_004136199.1 uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus]8.6e-7391.77Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD  PADDQKR KHSPSSSSILNY GQDDDK+SKSFRFSFPSPSP RQEK VHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PS+ LEIKADGDELI+PKKGNILAIQS RNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
XP_022930990.1 uncharacterized protein LOC111437318 [Cucurbita moschata]3.5e-7492.41Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSS  ILNYDGQDD+KASKSFRFSFP+PSP RQEKFVHAIPILTI CFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSEHLEIKA+GDELIVPKKGNILAIQSLRNLKEIEKS+SL+SR PRKL DF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
XP_022995482.1 uncharacterized protein LOC111491006 [Cucurbita maxima]3.7e-7694.94Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSS ILNYDGQDDDKASKSFRFSFP+PSP RQEKFVHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSEHLEIKA+GDELIVPKKGNILAIQSLRNLKEIEKS+SL+SR PRKLADF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
XP_038888243.1 uncharacterized protein LOC120078100 [Benincasa hispida]2.3e-7391.25Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD VPADDQKR KHSPSSSSI NYDGQDDD+ASKSFRFSFPSP P RQEKFVHAIPILTIICFLILY CSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSY--SLKSRPPRKLADF
        QFHGFKRP+E LEIKADGDELI+PKKGNILAIQS RNLKEIEKSY  SLKSRPPRKLADF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSY--SLKSRPPRKLADF
TrEMBL top hitse value%identityAlignment
A0A0A0LE94 Uncharacterized protein4.2e-7391.77Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD  PADDQKR KHSPSSSSILNY GQDDDK+SKSFRFSFPSPSP RQEK VHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PS+ LEIKADGDELI+PKKGNILAIQS RNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQJ2 uncharacterized protein LOC103503567 isoform X26.6e-7190.57Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD  PADDQKR KHSPSSSSILNY GQDDDK+SKSFRFSFPSPSP RQEK VHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKA-DGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPS+ LEIKA DG ELI+PKKGNILAIQS RNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSEHLEIKA-DGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
A0A5A7T6T2 Uncharacterized protein6.6e-7190.57Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD  PADDQKR KHSPSSSSILNY GQDDDK+SKSFRFSFPSPSP RQEK VHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKA-DGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPS+ LEIKA DG ELI+PKKGNILAIQS RNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSEHLEIKA-DGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
A0A6J1EYA9 uncharacterized protein LOC1114373181.7e-7492.41Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSS  ILNYDGQDD+KASKSFRFSFP+PSP RQEKFVHAIPILTI CFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSEHLEIKA+GDELIVPKKGNILAIQSLRNLKEIEKS+SL+SR PRKL DF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
A0A6J1JZ13 uncharacterized protein LOC1114910061.8e-7694.94Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSS ILNYDGQDDDKASKSFRFSFP+PSP RQEKFVHAIPILTIICFLILYI SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLA

Query:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSEHLEIKA+GDELIVPKKGNILAIQSLRNLKEIEKS+SL+SR PRKLADF
Subjt:  QFHGFKRPSEHLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35470.1 unknown protein1.1e-2548.52Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSP-SSSSILNYDGQDDDKASKSFRFSFPSP---SPLRQEKFVHAIPILTIICFLILYICSHSPSQ
        MQR SL S  SKLH +G G K D    DD K    SP SSSS ++YD  +          S  SP   +  +QEK VH IPILT+ICF+ILY+ S++PSQ
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSP-SSSSILNYDGQDDDKASKSFRFSFPSP---SPLRQEKFVHAIPILTIICFLILYICSHSPSQ

Query:  SDLAQFHGFKRPSEHLEIK-ADGDELIVPKKGNILAIQ-SLRNLKEIEKSYSLKSRP-----PRKLADF
        SDLAQF+GF RPS+HLE    +GDE+    + + L+I+ S+RNL+E E S++ KS P      RK ADF
Subjt:  SDLAQFHGFKRPSEHLEIK-ADGDELIVPKKGNILAIQ-SLRNLKEIEKSYSLKSRP-----PRKLADF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCAATCTCTAGGCTCACCAGTCTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAATCCGATGCAGTTCCGGCCGACGATCAAAAGCGCAACAAGCACTCTCC
ATCTTCTTCCTCAATTCTCAACTACGACGGACAAGACGACGATAAAGCTTCTAAATCTTTCCGATTCTCGTTTCCGTCGCCTTCTCCTCTGCGGCAGGAGAAGTTCGTTC
ACGCCATCCCTATCCTCACCATTATCTGCTTCCTCATCCTTTACATCTGCTCGCACAGTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATTCAAGCGTCCTTCAGAA
CATTTAGAGATCAAAGCCGATGGAGATGAACTTATCGTACCGAAGAAAGGCAACATTCTGGCGATTCAAAGTCTCCGTAACCTAAAAGAGATCGAAAAATCATATTCTCT
TAAATCTCGCCCTCCGAGGAAACTCGCCGATTTCTAA
mRNA sequenceShow/hide mRNA sequence
CTCCTTGTAAGATTCCAACGTCACGAGGGCCAAATGGAAAACTAACACAAAAAGTTATCACGGTACTAAGCTAGTTTCAGTGAGCAACATCGCTTCTCTCTCTACGTCTC
TCTTTCTCTCTCTACCATGCAAAGGCAATCTCTAGGCTCACCAGTCTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAATCCGATGCAGTTCCGGCCGACGATCAAAAGC
GCAACAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGACGGACAAGACGACGATAAAGCTTCTAAATCTTTCCGATTCTCGTTTCCGTCGCCTTCTCCTCTGCGG
CAGGAGAAGTTCGTTCACGCCATCCCTATCCTCACCATTATCTGCTTCCTCATCCTTTACATCTGCTCGCACAGTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATT
CAAGCGTCCTTCAGAACATTTAGAGATCAAAGCCGATGGAGATGAACTTATCGTACCGAAGAAAGGCAACATTCTGGCGATTCAAAGTCTCCGTAACCTAAAAGAGATCG
AAAAATCATATTCTCTTAAATCTCGCCCTCCGAGGAAACTCGCCGATTTCTAAACTCCACATTTCCGATTATCTGACCTTCCGGTAGAACCTCACCGTCCTCGTTTTCGC
CTTACGGCTTCACTCGCCGGCGCGTGTGCCTCCCGTAGCCATTTTTTTATAAAGCTTCTGTACATCAAATTCTCCGTCAGATTAAATTGTTTTTATTCCTTTTTCTTTCG
CTTTTTCAATTTTTTATTGGTCTCTGCTTGCGCCGACGGCGCTTCTGTAACTTCCGACGATATATTATCAATTTAATCTAAACAAAGAATGAGTAAATTATCAGTTCATC
AGATAACACAACCGCCGGTCGACGCGCCGCTCCTTCGCCCGCGCCGGCGCGCGGAGATGGAAATGGAATCCAGCTGGAATATATTTACTGTTATTATCGATTTTCCGAAT
CGGACCGTTACGGCATTGGGAGAAGGGTCGAGACGCCAGCTGGAAAATGCTGTAGTCGCTGACGGTATCAGGTTCTTTCGATCAAATTTATTTTTAGGCCCTCCATTTAT
TGCATATTTATTTTTGTGGCATACGCCGTTTAATTTAATCTCACACCCGAATGCACAGATATTTCCGTGTTGTTGCCCTTCCGTGTCTCATCTCAGCATTGTGTTGGAAT
TTTTTCTTCAATGCATTTAGTAAAATAAAATACTATATATTAATTTACTGCAGAGTATGCTCGAAATTCATATATAGTTAGTTTTAGTAAGATCTGTGAATTACTGAAAA
TGTTGTTTGTAATGTAAATAGTTTTGGATGTC
Protein sequenceShow/hide protein sequence
MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPLRQEKFVHAIPILTIICFLILYICSHSPSQSDLAQFHGFKRPSE
HLEIKADGDELIVPKKGNILAIQSLRNLKEIEKSYSLKSRPPRKLADF