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Tan0008772 (gene) of Snake gourd v1 genome

Gene IDTan0008772
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:42655646..42655861
RNA-Seq ExpressionTan0008772
SyntenyTan0008772
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]6.1e-1056.52Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRG
        +SWLIC+VFI+MLV  QEV A   +LK  + C+ P+PP SCSS   + +P   TN Y RGCSAI+RCRG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0747.89Show/hide
Query:  ICLVFINMLVTRQEVAADR------TYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        ICL  I ML+T Q+V  ++       YLK ++C+ PNPP  CS    +G   V  N Y RGCSAI+RCRGG
Subjt:  ICLVFINMLVTRQEVAADR------TYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]4.7e-1055.71Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLICLV I MLV  Q+VA++  +LK  D C QPNPP  CS  N      V  N Y RGCS I RCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]4.2e-1157.14Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLIC+V I+MLV  QEVA++  +LK  D C QPNPPL CS  N      V  N Y RGCS I RCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]6.5e-1258.57Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLIC+VFI+MLV    VAA++ YL+ +D CNQPNPP +CS    E    V  N Y RGCSAI+RCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein2.3e-1057.14Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLICL  I MLV  QEVAA+  +LK +D CNQP+PP +C  PN +       N Y R CSAINRCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

A0A0A0LZK3 Uncharacterized protein2.0e-0648.57Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLIC   ++MLV   EVAA+  +L   D C QP+PP SC       SP      Y RGCS I RCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein2.9e-1056.52Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRG
        +SWLIC+VFI+MLV  QEV A   +LK  + C+ P+PP SCSS   + +P   TN Y RGCSAI+RCRG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRG

A0A1S4DY33 protein RALF-like 306.8e-0750Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLIC   ++MLV   EVAA   +LK +D C QP+PP SC       SP      Y RGCS I RCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

A0A6J1G7J2 protein RALF-like 102.3e-1055.71Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG
        +SWLICLV I MLV  Q+VA++  +LK  D C QPNPP  CS  N      V  N Y RGCS I RCRGG
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLKLVD-CNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 121.2e-0538.57Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++W+I L+ I  +V  + V + R Y++   +  C  PNPP  C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

F4ISE2 Protein RALF-like 131.1e-0640Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++W+ICL+ I   V  + V + R Y++   +  C  PNPP  C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

O64466 Protein RALF-like 112.2e-0741.43Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++WLICL+ I   V  + V + R Y++   +  C  PNPP  C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

Q0V822 Protein RALF-like 261.2e-0537.5Show/hide
Query:  QSWLICL--VFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++W+I L  + + ++V + E    R YL    L  C  PNPP  C   N    P V  + Y+RGCS I RCR
Subjt:  QSWLICL--VFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

Q9LSG0 Protein RALF-like 251.8e-0440.85Show/hide
Query:  MKQSWLICLVFINMLVTRQEVAAD--RTYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        MK   +I LV  ++L+  +  A D  R YL L  C +PN P  C     +   PV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVFINMLVTRQEVAAD--RTYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19030.1 ralf-like 111.6e-0841.43Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++WLICL+ I   V  + V + R Y++   +  C  PNPP  C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

AT2G19040.1 RALF-like 128.8e-0738.57Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++W+I L+ I  +V  + V + R Y++   +  C  PNPP  C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

AT2G19045.1 RALF-like 137.9e-0840Show/hide
Query:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++W+ICL+ I   V  + V + R Y++   +  C  PNPP  C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

AT3G25165.1 ralf-like 251.3e-0540.85Show/hide
Query:  MKQSWLICLVFINMLVTRQEVAAD--RTYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        MK   +I LV  ++L+  +  A D  R YL L  C +PN P  C     +   PV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVFINMLVTRQEVAAD--RTYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR

AT3G25170.1 ralf-like 268.8e-0737.5Show/hide
Query:  QSWLICL--VFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR
        ++W+I L  + + ++V + E    R YL    L  C  PNPP  C   N    P V  + Y+RGCS I RCR
Subjt:  QSWLICL--VFINMLVTRQEVAADRTYLK---LVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTTTTATTAACATGTTGGTGACACGACAAGAAGTAGCGGCAGACAGAACATATCTTAAACTAGTAGATTGCAACCAACCAAA
CCCACCACTAAGTTGTTCTTCACCGAATGGAGAAGGTTCTCCACCTGTTTATACTAATACCTATACTCGCGGTTGCTCTGCTATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTTTTATTAACATGTTGGTGACACGACAAGAAGTAGCGGCAGACAGAACATATCTTAAACTAGTAGATTGCAACCAACCAAA
CCCACCACTAAGTTGTTCTTCACCGAATGGAGAAGGTTCTCCACCTGTTTATACTAATACCTATACTCGCGGTTGCTCTGCTATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVFINMLVTRQEVAADRTYLKLVDCNQPNPPLSCSSPNGEGSPPVYTNTYTRGCSAINRCRGG